FFCP PHASE1:Mm9::chr13:54691374..54691395,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=28126|HGNC=|MCL_coexpression_id=101|UniProt=D3Z7M5|association_with_transcript=23bp_to_ENSMUST00000148222_5end|description=CAGE_peak_2_at_Nop16_5end|id=chr13:54691374..54691395,-|ontology_enrichment_celltype=CL:0000219!9.97e-09!54;CL:0002320!8.31e-07!46;CL:0000134!8.31e-07!46|ontology_enrichment_celltype_v019_2=CL:0000219,9.97e-09,54;CL:0002320,8.31e-07,46;CL:0000134,8.31e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!7.54e-08!85;UBERON:0005172!3.89e-07!49;UBERON:0005173!3.89e-07!49;UBERON:0002417!3.89e-07!49;UBERON:0000916!3.89e-07!49;UBERON:0000466!4.20e-07!79;UBERON:0009854!4.91e-07!23;UBERON:0009856!4.91e-07!23;UBERON:0002384!8.31e-07!46;UBERON:0001045!9.06e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.11e-09,79;UBERON:0002100,2.84e-07,90;UBERON:0005172,3.96e-07,49;UBERON:0005173,3.96e-07,49;UBERON:0002417,3.96e-07,49;UBERON:0000916,3.96e-07,49;UBERON:0009854,4.91e-07,23;UBERON:0009856,4.91e-07,23;UBERON:0002384,8.31e-07,46|phase1_expression=5.2849119544582,4.88565570695105,4.54999239389536,1.20985684522732,0.500895729946347,4.53274034162102,8.41005506143892,3.61545305636414,56.7378550271217,45.4085181064667,37.4967350413856,41.960155631547,2.39681021903688,2.36035086531293,1.66554880907831,3.64455481301687,3.49780939064073,3.3123527362615,3.29074640653773,5.51706547337439,6.88850650223665,5.75887516965135,7.31359409589019,4.63978026100879,3.21172993494038,2.29692785646008,4.30761996159075,4.74036711908956,2.85035129184561,2.01624103807945,5.09980174507201,15.2407361630311,20.2971379902908,15.8481681015439,14.731432607315,15.2935873729813,15.3127017196777,0,0.7813353445238,0.523523743973798,0,0,0.971020706062307,6.54663453473002,6.08261587317087,7.70896359079063,5.47673941043627,6.97680500417429,11.2039953194581,6.02732687130279,5.87942970826523,8.62515386189829,6.20795642413625,7.97898356212479,6.04968838456435,3.34437266846731,2.57880095944881,4.12537673821954,2.02316460859598,3.70293685490423,5.70448263155561,7.79342423759004,5.33576877666684,7.64914759689189,9.88866362566974,4.9733608046227,3.29560121570245,7.68436610643109,2.38486108309499,2.8351247049655,4.83747411108179,3.42781181284564,6.40518768759679,3.1847607795888,5.36734637702124,2.75765635983006,2.20231761998777,3.06449611404451,4.6081959976873,3.69281605644543,6.22115976496386,6.77187381723788,2.23346399201105,6.19038871034848,4.43114918552749,4.12480019663135,4.9830088279686,3.54158947068071,24.3081080599521,10.58001841495,3.47837386442013,17.2084775396277,23.1190253460635,31.3027851149934,20.1430689408777,14.3368603871147,6.74133216632409,6.13549161281008,5.97507810586598,6.00677276667578,4.92951969218382,1.28326477414318,2.54805239706646,0,8.65964164044856,5.32055717497707,5.05524445014783,13.7020655662872,4.91981978929626,11.4300447079915,8.67426633830679,11.8741536541735,13.3756988408514,16.5794904607885,10.2302175208063,10.4303270803631,3.21353458054686,2.16899035379867,1.76922110389975,3.72063754879041,3.09178125844551,4.84875253135222,11.1835056730873,2.04946557908083,1.46612694769419,2.55457055208591,7.90779821739074,11.9980546198682,13.723584523891,2.84602214869163,2.74500361691176,4.27224797183739,3.12883776346098,4.09144731728529,2.49345653471472,4.70499662896497,3.66621709861139,2.86136032403214,0.758168275301024,3.15662783829711,7.93734702072493,8.04657365517155,5.04173963454978,4.9732589885786,3.6739709541717,4.61209393025459,3.46696380870997,3.62184719034622,6.89817577385095,3.9712276835242,5.10258260075452,6.57587197282724,6.39508673218875,5.57203466435466,4.7329891373827,6.36909653819178,21.7686088067103,15.9555702411123,11.0823764764281,4.34964122324554,4.92504725960302,3.78130329068131,3.78791576936336,4.13204886669548,3.23960937063494,3.0229412817553,2.41446061259657,3.03589890154641,2.96207729844265,2.79084688934462,1.70244500046297,1.90059983652932,2.63460138349261,1.8788898626452,3.78521907415429,6.27718135513635,1.98251269790279,3.43785736662608,7.46508876873319,5.57368012465052,5.28356591420583,4.63872106633688,4.44756087689741,3.61428689613862,5.21981967698963,4.44687177754829,3.01602250560323,3.78017296878187,3.31438948102504,7.19055526923377,4.75503709724327,4.77939055810481,8.15571974098251,7.31190480702264,2.25415471346161,6.51684249105006,4.84881217919064,4.62896411276103,5.05892296994058,10.9231509504906,10.3619160375307,10.7355532611966,12.4510103376603,7.34118465150814,7.07612382407531,7.19558759631532,3.04290182082754,4.58236603529592,5.34714288740982,4.31544206176216,11.5116011010275,10.7078951143352,5.75072826109418,9.67566463938109,13.1055822708115,12.6289438973556,18.298536179235,25.5695066322585,3.14080423283228,6.82169082373745,6.19266910479698,6.11082308790677,7.04070744865506,4.18765643604539,3.80869825417622,4.29294025287157,2.52216230569906,3.5434350343804,1.75400245523236,4.26044618260919,3.62638461918381,3.03763023021174,9.04747703635634,2.71952841909355,3.44234991113325,5.51873492609465,2.568809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| ||
|EntrezGene=28126 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|UniProt=D3Z7M5 | |||
|association_with_transcript=23bp_to_ENSMUST00000148222_5end | |||
|description=CAGE_peak_2_at_Nop16_5end | |||
|id=chr13:54691374..54691395,- | |||
|ontology_enrichment_celltype=CL:0000219!9.97e-09!54;CL:0002320!8.31e-07!46;CL:0000134!8.31e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,9.97e-09,54;CL:0002320,8.31e-07,46;CL:0000134,8.31e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!7.54e-08!85;UBERON:0005172!3.89e-07!49;UBERON:0005173!3.89e-07!49;UBERON:0002417!3.89e-07!49;UBERON:0000916!3.89e-07!49;UBERON:0000466!4.20e-07!79;UBERON:0009854!4.91e-07!23;UBERON:0009856!4.91e-07!23;UBERON:0002384!8.31e-07!46;UBERON:0001045!9.06e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.11e-09,79;UBERON:0002100,2.84e-07,90;UBERON:0005172,3.96e-07,49;UBERON:0005173,3.96e-07,49;UBERON:0002417,3.96e-07,49;UBERON:0000916,3.96e-07,49;UBERON:0009854,4.91e-07,23;UBERON:0009856,4.91e-07,23;UBERON:0002384,8.31e-07,46 | |||
|phase1_expression=5.2849119544582,4.88565570695105,4.54999239389536,1.20985684522732,0.500895729946347,4.53274034162102,8.41005506143892,3.61545305636414,56.7378550271217,45.4085181064667,37.4967350413856,41.960155631547,2.39681021903688,2.36035086531293,1.66554880907831,3.64455481301687,3.49780939064073,3.3123527362615,3.29074640653773,5.51706547337439,6.88850650223665,5.75887516965135,7.31359409589019,4.63978026100879,3.21172993494038,2.29692785646008,4.30761996159075,4.74036711908956,2.85035129184561,2.01624103807945,5.09980174507201,15.2407361630311,20.2971379902908,15.8481681015439,14.731432607315,15.2935873729813,15.3127017196777,0,0.7813353445238,0.523523743973798,0,0,0.971020706062307,6.54663453473002,6.08261587317087,7.70896359079063,5.47673941043627,6.97680500417429,11.2039953194581,6.02732687130279,5.87942970826523,8.62515386189829,6.20795642413625,7.97898356212479,6.04968838456435,3.34437266846731,2.57880095944881,4.12537673821954,2.02316460859598,3.70293685490423,5.70448263155561,7.79342423759004,5.33576877666684,7.64914759689189,9.88866362566974,4.9733608046227,3.29560121570245,7.68436610643109,2.38486108309499,2.8351247049655,4.83747411108179,3.42781181284564,6.40518768759679,3.1847607795888,5.36734637702124,2.75765635983006,2.20231761998777,3.06449611404451,4.6081959976873,3.69281605644543,6.22115976496386,6.77187381723788,2.23346399201105,6.19038871034848,4.43114918552749,4.12480019663135,4.9830088279686,3.54158947068071,24.3081080599521,10.58001841495,3.47837386442013,17.2084775396277,23.1190253460635,31.3027851149934,20.1430689408777,14.3368603871147,6.74133216632409,6.13549161281008,5.97507810586598,6.00677276667578,4.92951969218382,1.28326477414318,2.54805239706646,0,8.65964164044856,5.32055717497707,5.05524445014783,13.7020655662872,4.91981978929626,11.4300447079915,8.67426633830679,11.8741536541735,13.3756988408514,16.5794904607885,10.2302175208063,10.4303270803631,3.21353458054686,2.16899035379867,1.76922110389975,3.72063754879041,3.09178125844551,4.84875253135222,11.1835056730873,2.04946557908083,1.46612694769419,2.55457055208591,7.90779821739074,11.9980546198682,13.723584523891,2.84602214869163,2.74500361691176,4.27224797183739,3.12883776346098,4.09144731728529,2.49345653471472,4.70499662896497,3.66621709861139,2.86136032403214,0.758168275301024,3.15662783829711,7.93734702072493,8.04657365517155,5.04173963454978,4.9732589885786,3.6739709541717,4.61209393025459,3.46696380870997,3.62184719034622,6.89817577385095,3.9712276835242,5.10258260075452,6.57587197282724,6.39508673218875,5.57203466435466,4.7329891373827,6.36909653819178,21.7686088067103,15.9555702411123,11.0823764764281,4.34964122324554,4.92504725960302,3.78130329068131,3.78791576936336,4.13204886669548,3.23960937063494,3.0229412817553,2.41446061259657,3.03589890154641,2.96207729844265,2.79084688934462,1.70244500046297,1.90059983652932,2.63460138349261,1.8788898626452,3.78521907415429,6.27718135513635,1.98251269790279,3.43785736662608,7.46508876873319,5.57368012465052,5.28356591420583,4.63872106633688,4.44756087689741,3.61428689613862,5.21981967698963,4.44687177754829,3.01602250560323,3.78017296878187,3.31438948102504,7.19055526923377,4.75503709724327,4.77939055810481,8.15571974098251,7.31190480702264,2.25415471346161,6.51684249105006,4.84881217919064,4.62896411276103,5.05892296994058,10.9231509504906,10.3619160375307,10.7355532611966,12.4510103376603,7.34118465150814,7.07612382407531,7.19558759631532,3.04290182082754,4.58236603529592,5.34714288740982,4.31544206176216,11.5116011010275,10.7078951143352,5.75072826109418,9.67566463938109,13.1055822708115,12.6289438973556,18.298536179235,25.5695066322585,3.14080423283228,6.82169082373745,6.19266910479698,6.11082308790677,7.04070744865506,4.18765643604539,3.80869825417622,4.29294025287157,2.52216230569906,3.5434350343804,1.75400245523236,4.26044618260919,3.62638461918381,3.03763023021174,9.04747703635634,2.71952841909355,3.44234991113325,5.51873492609465,2.56880943980467,3.39913891117389,8.6885521049638,4.54447668967871,4.41711507182759,7.80877488593277,4.52389135238878,3.58453196928828,3.56477878531831,3.67999490025482,4.04810701674894,5.84511715822624,4.74345333535828,0.642642632843614,3.83238230062325,8.01295216502649,4.0721739838394,3.29940245945071,19.9117707509944,8.49732226542435,9.67435382287203,12.4479352638893,11.5167738223501,8.30074899448604,9.56184684722418,6.5436071305951,10.3384239731569,12.6414703174326,14.7586052004998,11.3449097573006,2.04263763452273,6.30213829109586,7.24408629183425,4.71541477069503,4.61084607469911,2.67553226403106,4.60737257685939,4.87143918583359,8.68285319835728,4.2366414172764,7.05690873775878,4.78170133530292,3.39075296061402,5.66941494324665,7.04296829618505,8.37118588699812,6.99554007911642,2.59595422814714,4.10090113914846,4.33412422722767,7.03739204004904,5.46268525313604,4.23752105935178,3.66045077130436,5.09935289981566,4.47844647435706,4.56059913554598,7.63736494412091,5.21954389408873,5.69294507955176,6.58832579012988,9.4089733206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|short_description=p2@Nop16 | |||
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Revision as of 00:47, 13 September 2013
Short description: | p2@Nop16 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nop16_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 23bp_to_ENSMUST00000148222_5end |
EntrezGene: | Nop16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 9.97e-09 | 54 |
connective tissue cell | 8.31e-07 | 46 |
mesenchymal cell | 8.31e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 8.11e-09 | 79 |
trunk | 2.84e-07 | 90 |
abdomen element | 3.96e-07 | 49 |
abdominal segment element | 3.96e-07 | 49 |
abdominal segment of trunk | 3.96e-07 | 49 |
abdomen | 3.96e-07 | 49 |
digestive tract diverticulum | 4.91e-07 | 23 |
sac | 4.91e-07 | 23 |
connective tissue | 8.31e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.