FFCP PHASE1:Mm9::chr13:43620957..43620965,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:43620957..43620965,-|id=chr13:43620957..43620965,-|ontology_enrichment_celltype=CL:0000624!7.81e-17!8;CL:0000893!1.30e-16!6;CL:0002489!1.30e-16!6;CL:0000898!1.30e-16!6;CL:0000809!1.30e-16!6;CL:0000810!1.30e-16!6;CL:0000895!1.30e-16!6;CL:0000808!1.30e-16!6;CL:0000894!1.30e-16!6;CL:0000806!1.30e-16!6;CL:0000807!1.30e-16!6;CL:0000805!1.30e-16!6;CL:0002425!1.30e-16!6;CL:0002436!1.30e-16!6;CL:0002427!1.30e-16!6;CL:0002428!1.30e-16!6;CL:0002429!1.30e-16!6;CL:0002433!1.30e-16!6;CL:0002431!1.30e-16!6;CL:0002432!1.30e-16!6;CL:0000084!1.62e-15!11;CL:0000827!1.62e-15!11;CL:0000791!7.40e-15!9;CL:0000789!7.40e-15!9;CL:0002420!7.40e-15!9;CL:0002419!7.40e-15!9;CL:0000790!7.40e-15!9;CL:0000838!4.06e-14!12;CL:0000542!6.21e-13!13;CL:0000051!6.21e-13!13;CL:0000988!1.48e-12!32;CL:0002032!1.48e-12!32;CL:0000037!1.48e-12!32;CL:0000566!1.48e-12!32;CL:0000837!1.48e-12!32;CL:0000738!1.37e-09!17;CL:0002087!1.37e-09!17;CL:0002320!6.37e-08!46;CL:0000134!6.37e-08!46;CL:0000219!1.93e-07!54;CL:0000034!8.93e-07!97|ontology_enrichment_celltype_v019_2=CL:0000815,6.88e-10,1;CL:0000792,6.88e-10,1;CL:0000355,1.46e-09,9|ontology_enrichment_disease=DOID:0060100!2.94e-10!3;DOID:4045!2.94e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.53e-27,3;DOID:4045,2.53e-27,3;DOID:0050686,4.99e-14,6|ontology_enrichment_uberon=UBERON:0002384!6.37e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11;UBERON:0002204,6.11e-07,32|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.84473233291,1.17032263160997,0.171217968225505,0.0797721589953364,0.342401459862411,0.524522414513984,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3451131675823,17.9707129240474,14.6586648312664,236.469058188468,24.589637458504,14.0798002379035,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,1.42081749697796,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0|short_description=p@chr13:43620957..43620965,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:43620957..43620965,- | |||
|id=chr13:43620957..43620965,- | |||
|ontology_enrichment_celltype=CL:0000624!7.81e-17!8;CL:0000893!1.30e-16!6;CL:0002489!1.30e-16!6;CL:0000898!1.30e-16!6;CL:0000809!1.30e-16!6;CL:0000810!1.30e-16!6;CL:0000895!1.30e-16!6;CL:0000808!1.30e-16!6;CL:0000894!1.30e-16!6;CL:0000806!1.30e-16!6;CL:0000807!1.30e-16!6;CL:0000805!1.30e-16!6;CL:0002425!1.30e-16!6;CL:0002436!1.30e-16!6;CL:0002427!1.30e-16!6;CL:0002428!1.30e-16!6;CL:0002429!1.30e-16!6;CL:0002433!1.30e-16!6;CL:0002431!1.30e-16!6;CL:0002432!1.30e-16!6;CL:0000084!1.62e-15!11;CL:0000827!1.62e-15!11;CL:0000791!7.40e-15!9;CL:0000789!7.40e-15!9;CL:0002420!7.40e-15!9;CL:0002419!7.40e-15!9;CL:0000790!7.40e-15!9;CL:0000838!4.06e-14!12;CL:0000542!6.21e-13!13;CL:0000051!6.21e-13!13;CL:0000988!1.48e-12!32;CL:0002032!1.48e-12!32;CL:0000037!1.48e-12!32;CL:0000566!1.48e-12!32;CL:0000837!1.48e-12!32;CL:0000738!1.37e-09!17;CL:0002087!1.37e-09!17;CL:0002320!6.37e-08!46;CL:0000134!6.37e-08!46;CL:0000219!1.93e-07!54;CL:0000034!8.93e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,6.88e-10,1;CL:0000792,6.88e-10,1;CL:0000355,1.46e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.94e-10!3;DOID:4045!2.94e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.53e-27,3;DOID:4045,2.53e-27,3;DOID:0050686,4.99e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.37e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11;UBERON:0002204,6.11e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.84473233291,1.17032263160997,0.171217968225505,0.0797721589953364,0.342401459862411,0.524522414513984,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3451131675823,17.9707129240474,14.6586648312664,236.469058188468,24.589637458504,14.0798002379035,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,1.42081749697796,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr13:43620957..43620965,- | |||
}} |
Revision as of 00:35, 13 September 2013
Short description: | p@chr13:43620957..43620965, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:43620957..43620965, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 6.88e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.88e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.46e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.46e-09 | 9 |
striated muscle tissue | 1.46e-09 | 9 |
muscle tissue | 1.46e-09 | 9 |
multilaminar epithelium | 1.46e-09 | 9 |
epithelial vesicle | 1.46e-09 | 9 |
musculature | 1.46e-09 | 9 |
somite | 1.46e-09 | 9 |
myotome | 1.46e-09 | 9 |
presomitic mesoderm | 1.46e-09 | 9 |
presumptive segmental plate | 1.46e-09 | 9 |
dermomyotome | 1.46e-09 | 9 |
trunk paraxial mesoderm | 1.46e-09 | 9 |
musculature of body | 1.16e-08 | 10 |
dense mesenchyme tissue | 6.32e-08 | 11 |
paraxial mesoderm | 6.32e-08 | 11 |
presumptive paraxial mesoderm | 6.32e-08 | 11 |
musculoskeletal system | 6.11e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.53e-27 | 3 |
muscle cancer | 2.53e-27 | 3 |
organ system cancer | 4.99e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.