FFCP PHASE1:Mm9::chr13:20564963..20564978,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=140580|HGNC=|MCL_coexpression_id=1|UniProt=Q8BPU7|association_with_transcript=1bp_to_ENSMUST00000110493,uc007ppq.1,uc007ppr.1_5end|description=CAGE_peak_6_at_Elmo1_5end|id=chr13:20564963..20564978,+|ontology_enrichment_celltype=CL:0000117!5.34e-17!23;CL:0000337!5.34e-17!23;CL:0000540!9.30e-10!33;CL:0000047!9.30e-10!33;CL:0000031!9.30e-10!33;CL:0000404!9.30e-10!33;CL:0000393!6.46e-07!39;CL:0000211!6.46e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-21,23;CL:0000337,1.64e-21,23;CL:0000540,1.45e-12,33;CL:0000047,1.45e-12,33;CL:0000031,1.45e-12,33;CL:0000404,1.45e-12,33;CL:0000393,1.71e-09,39;CL:0000211,1.71e-09,39;CL:0002319,1.14e-08,43;CL:0000221,2.61e-08,44;CL:0000133,2.61e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.63e-29!52;UBERON:0005068!1.63e-29!52;UBERON:0006241!1.63e-29!52;UBERON:0007135!1.63e-29!52;UBERON:0002346!3.76e-29!71;UBERON:0003075!3.76e-29!71;UBERON:0007284!3.76e-29!71;UBERON:0000033!2.37e-28!63;UBERON:0000955!3.16e-28!50;UBERON:0006238!3.16e-28!50;UBERON:0002616!2.44e-27!49;UBERON:0001017!3.76e-26!73;UBERON:0005743!3.76e-26!73;UBERON:0003056!1.25e-25!49;UBERON:0000073!8.19e-25!75;UBERON:0001016!8.19e-25!75;UBERON:0002020!1.02e-22!34;UBERON:0003080!3.03e-22!40;UBERON:0002780!2.35e-21!39;UBERON:0001890!2.35e-21!39;UBERON:0006240!2.35e-21!39;UBERON:0004121!2.45e-21!102;UBERON:0000924!2.45e-21!102;UBERON:0006601!2.45e-21!102;UBERON:0002791!5.75e-19!29;UBERON:0003528!5.75e-19!29;UBERON:0001893!5.75e-19!29;UBERON:0007811!1.50e-15!86;UBERON:0000153!4.98e-13!94;UBERON:0000956!9.12e-13!21;UBERON:0001869!9.12e-13!21;UBERON:0000203!9.12e-13!21;UBERON:0002619!3.25e-10!17;UBERON:0002021!1.34e-09!10;UBERON:0000411!1.34e-09!10;UBERON:0001950!1.34e-09!10;UBERON:0003076!1.19e-07!12;UBERON:0003057!1.19e-07!12;UBERON:0000025!1.50e-07!114;UBERON:0002420!1.70e-07!8;UBERON:0007245!1.70e-07!8;UBERON:0010009!1.70e-07!8;UBERON:0010011!1.70e-07!8;UBERON:0000454!1.70e-07!8;UBERON:0004111!4.79e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.23e-34,54;UBERON:0002346,2.04e-32,64;UBERON:0003075,2.04e-32,64;UBERON:0007284,2.04e-32,64;UBERON:0001049,2.41e-32,52;UBERON:0005068,2.41e-32,52;UBERON:0006241,2.41e-32,52;UBERON:0007135,2.41e-32,52;UBERON:0001017,6.15e-30,73;UBERON:0002020,2.22e-29,34;UBERON:0001016,1.16e-28,75;UBERON:0000955,1.51e-27,47;UBERON:0006238,1.51e-27,47;UBERON:0003056,1.74e-26,49;UBERON:0002616,1.79e-26,46;UBERON:0010371,2.64e-26,73;UBERON:0004121,6.56e-26,95;UBERON:0000924,6.56e-26,95;UBERON:0006601,6.56e-26,95;UBERON:0003528,1.64e-24,29;UBERON:0002791,1.64e-24,29;UBERON:0001893,1.64e-24,29;UBERON:0003080,3.21e-24,40;UBERON:0002780,4.07e-23,39;UBERON:0001890,4.07e-23,39;UBERON:0006240,4.07e-23,39;UBERON:0010314,1.88e-17,92;UBERON:0000956,1.84e-16,21;UBERON:0001869,1.84e-16,21;UBERON:0000203,1.84e-16,21;UBERON:0002619,3.74e-13,17;UBERON:0002021,6.06e-12,10;UBERON:0000411,6.06e-12,10;UBERON:0001950,6.06e-12,10;UBERON:0002420,3.12e-09,8;UBERON:0007245,3.12e-09,8;UBERON:0010009,3.12e-09,8;UBERON:0010011,3.12e-09,8;UBERON:0000454,3.12e-09,8;UBERON:0003076,2.24e-08,12;UBERON:0003057,2.24e-08,12;UBERON:0000025,3.93e-07,114;UBERON:0002240,7.81e-07,6;UBERON:0005174,7.81e-07,6;UBERON:0001137,7.81e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,8.49729135610311,15.340738398889,9.50747105259269,0,0,0,0,0,0,1.15265491596466,4.76972216618997,6.48028503992115,3.36519938162211,9.71213346972932,9.718215801871,6.1245399607477,6.80502844229478,6.43453150627015,11.0115880999389,19.2807880508633,15.5142598588806,8.44072241473241,13.0827330351446,9.89735404057844,22.8930059181132,9.56696437053856,10.5430790965999,9.72274332063103,14.6642831223076,14.7255562201987,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0.60289056221049,0.352766121407114,0,0,0.289198713839823,0,0,0,0,0,14.3462590535658,16.127396424636,0.255457055208591,0,0,0,19.7723644014366,29.7375391832107,21.9895116197513,21.2065670634577,21.4800984157478,27.2202338373024,24.6606719862992,0,0,0,2.10441855886474,0.130120442962704,1.14951052216736,0.900310649026746,1.35634336052144,1.42876648217788,2.17793324484245,1.96773621575431,7.76110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0,6.51898840548794,6.07137213037778,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,13.8073507389501,13.7137673312878,0,0,0,0,0.646270193198397,0,0,0,0,0,0,16.3873871375122,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0,0.709360934569094,1.24858172321449,1.15184314421485,0.608929898229199,0,0,0.441056796109924,0,0,0,0,0,0,10.198391610578,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,17.5073071211291,24.8575627713876,13.7494923225455,16.6697586873377,16.4419804744954,11.3309084608455,14.1754725048679,21.6154177547626,19.4851235863208,20.7104124700728,1.55681021376265,2.79317411380722,2.90247129782028,1.94485373654635,2.09613162627982,1.10306105070008,2.889207461421,2.47242068686673,2.24643446714271,2.02157769411038,1.77435509923168,2.07488975524684,2.24739617927718,2.30490548657529,2.1825478203133,1.42888107384922,1.73826488917283,2.50781986602817,1.23625770240992,1.32479028120958,2.74295401908332,2.12970967391205,2.62279808942053,2.76158191601424,2.54095327121393,1.09998990259179,2.0122077016005,2.89376682581627,2.03706170768793,1.68342681497322,0.593175090620871,1.97008964751127,0.818462086339379,2.78886314134739,2.12197272079256,3.49734809113124,0.701794825336225,1.07435527024149,0.956441660344217,0.441182838239031,0.463735671240843|short_description=p6@Elmo1}} | ||
|EntrezGene=140580 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BPU7 | |||
|association_with_transcript=1bp_to_ENSMUST00000110493,uc007ppq.1,uc007ppr.1_5end | |||
|description=CAGE_peak_6_at_Elmo1_5end | |||
|id=chr13:20564963..20564978,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.34e-17!23;CL:0000337!5.34e-17!23;CL:0000540!9.30e-10!33;CL:0000047!9.30e-10!33;CL:0000031!9.30e-10!33;CL:0000404!9.30e-10!33;CL:0000393!6.46e-07!39;CL:0000211!6.46e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-21,23;CL:0000337,1.64e-21,23;CL:0000540,1.45e-12,33;CL:0000047,1.45e-12,33;CL:0000031,1.45e-12,33;CL:0000404,1.45e-12,33;CL:0000393,1.71e-09,39;CL:0000211,1.71e-09,39;CL:0002319,1.14e-08,43;CL:0000221,2.61e-08,44;CL:0000133,2.61e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.63e-29!52;UBERON:0005068!1.63e-29!52;UBERON:0006241!1.63e-29!52;UBERON:0007135!1.63e-29!52;UBERON:0002346!3.76e-29!71;UBERON:0003075!3.76e-29!71;UBERON:0007284!3.76e-29!71;UBERON:0000033!2.37e-28!63;UBERON:0000955!3.16e-28!50;UBERON:0006238!3.16e-28!50;UBERON:0002616!2.44e-27!49;UBERON:0001017!3.76e-26!73;UBERON:0005743!3.76e-26!73;UBERON:0003056!1.25e-25!49;UBERON:0000073!8.19e-25!75;UBERON:0001016!8.19e-25!75;UBERON:0002020!1.02e-22!34;UBERON:0003080!3.03e-22!40;UBERON:0002780!2.35e-21!39;UBERON:0001890!2.35e-21!39;UBERON:0006240!2.35e-21!39;UBERON:0004121!2.45e-21!102;UBERON:0000924!2.45e-21!102;UBERON:0006601!2.45e-21!102;UBERON:0002791!5.75e-19!29;UBERON:0003528!5.75e-19!29;UBERON:0001893!5.75e-19!29;UBERON:0007811!1.50e-15!86;UBERON:0000153!4.98e-13!94;UBERON:0000956!9.12e-13!21;UBERON:0001869!9.12e-13!21;UBERON:0000203!9.12e-13!21;UBERON:0002619!3.25e-10!17;UBERON:0002021!1.34e-09!10;UBERON:0000411!1.34e-09!10;UBERON:0001950!1.34e-09!10;UBERON:0003076!1.19e-07!12;UBERON:0003057!1.19e-07!12;UBERON:0000025!1.50e-07!114;UBERON:0002420!1.70e-07!8;UBERON:0007245!1.70e-07!8;UBERON:0010009!1.70e-07!8;UBERON:0010011!1.70e-07!8;UBERON:0000454!1.70e-07!8;UBERON:0004111!4.79e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.23e-34,54;UBERON:0002346,2.04e-32,64;UBERON:0003075,2.04e-32,64;UBERON:0007284,2.04e-32,64;UBERON:0001049,2.41e-32,52;UBERON:0005068,2.41e-32,52;UBERON:0006241,2.41e-32,52;UBERON:0007135,2.41e-32,52;UBERON:0001017,6.15e-30,73;UBERON:0002020,2.22e-29,34;UBERON:0001016,1.16e-28,75;UBERON:0000955,1.51e-27,47;UBERON:0006238,1.51e-27,47;UBERON:0003056,1.74e-26,49;UBERON:0002616,1.79e-26,46;UBERON:0010371,2.64e-26,73;UBERON:0004121,6.56e-26,95;UBERON:0000924,6.56e-26,95;UBERON:0006601,6.56e-26,95;UBERON:0003528,1.64e-24,29;UBERON:0002791,1.64e-24,29;UBERON:0001893,1.64e-24,29;UBERON:0003080,3.21e-24,40;UBERON:0002780,4.07e-23,39;UBERON:0001890,4.07e-23,39;UBERON:0006240,4.07e-23,39;UBERON:0010314,1.88e-17,92;UBERON:0000956,1.84e-16,21;UBERON:0001869,1.84e-16,21;UBERON:0000203,1.84e-16,21;UBERON:0002619,3.74e-13,17;UBERON:0002021,6.06e-12,10;UBERON:0000411,6.06e-12,10;UBERON:0001950,6.06e-12,10;UBERON:0002420,3.12e-09,8;UBERON:0007245,3.12e-09,8;UBERON:0010009,3.12e-09,8;UBERON:0010011,3.12e-09,8;UBERON:0000454,3.12e-09,8;UBERON:0003076,2.24e-08,12;UBERON:0003057,2.24e-08,12;UBERON:0000025,3.93e-07,114;UBERON:0002240,7.81e-07,6;UBERON:0005174,7.81e-07,6;UBERON:0001137,7.81e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,8.49729135610311,15.340738398889,9.50747105259269,0,0,0,0,0,0,1.15265491596466,4.76972216618997,6.48028503992115,3.36519938162211,9.71213346972932,9.718215801871,6.1245399607477,6.80502844229478,6.43453150627015,11.0115880999389,19.2807880508633,15.5142598588806,8.44072241473241,13.0827330351446,9.89735404057844,22.8930059181132,9.56696437053856,10.5430790965999,9.72274332063103,14.6642831223076,14.7255562201987,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0.60289056221049,0.352766121407114,0,0,0.289198713839823,0,0,0,0,0,14.3462590535658,16.127396424636,0.255457055208591,0,0,0,19.7723644014366,29.7375391832107,21.9895116197513,21.2065670634577,21.4800984157478,27.2202338373024,24.6606719862992,0,0,0,2.10441855886474,0.130120442962704,1.14951052216736,0.900310649026746,1.35634336052144,1.42876648217788,2.17793324484245,1.96773621575431,7.76110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0,6.51898840548794,6.07137213037778,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,13.8073507389501,13.7137673312878,0,0,0,0,0.646270193198397,0,0,0,0,0,0,16.3873871375122,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0,0.709360934569094,1.24858172321449,1.15184314421485,0.608929898229199,0,0,0.441056796109924,0,0,0,0,0,0,10.198391610578,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,17.5073071211291,24.8575627713876,13.7494923225455,16.6697586873377,16.4419804744954,11.3309084608455,14.1754725048679,21.6154177547626,19.4851235863208,20.7104124700728,1.55681021376265,2.79317411380722,2.90247129782028,1.94485373654635,2.09613162627982,1.10306105070008,2.889207461421,2.47242068686673,2.24643446714271,2.02157769411038,1.77435509923168,2.07488975524684,2.24739617927718,2.30490548657529,2.1825478203133,1.42888107384922,1.73826488917283,2.50781986602817,1.23625770240992,1.32479028120958,2.74295401908332,2.12970967391205,2.62279808942053,2.76158191601424,2.54095327121393,1.09998990259179,2.0122077016005,2.89376682581627,2.03706170768793,1.68342681497322,0.593175090620871,1.97008964751127,0.818462086339379,2.78886314134739,2.12197272079256,3.49734809113124,0.701794825336225,1.07435527024149,0.956441660344217,0.441182838239031,0.463735671240843 | |||
|short_description=p6@Elmo1 | |||
}} |
Revision as of 00:06, 13 September 2013
Short description: | p6@Elmo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Elmo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 1bp_to_ENSMUST00000110493, uc007ppq.1, uc007ppr.1_5end |
EntrezGene: | Elmo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.64e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.64e-21 | 23 |
neuron | 1.45e-12 | 33 |
neuronal stem cell | 1.45e-12 | 33 |
neuroblast | 1.45e-12 | 33 |
electrically signaling cell | 1.45e-12 | 33 |
electrically responsive cell | 1.71e-09 | 39 |
electrically active cell | 1.71e-09 | 39 |
neural cell | 1.14e-08 | 43 |
ectodermal cell | 2.61e-08 | 44 |
neurectodermal cell | 2.61e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.