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FFCP PHASE1:Mm9::chr13:120217368..120217382,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=218693|HGNC=|MCL_coexpression_id=0|UniProt=D3Z3J6|association_with_transcript=-24bp_to_NM_001079849,uc007rzc.1_5end|description=CAGE_peak_5_at_Paip1_5end|id=chr13:120217368..120217382,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.08e-12!52;UBERON:0005068!1.08e-12!52;UBERON:0006241!1.08e-12!52;UBERON:0007135!1.08e-12!52;UBERON:0000033!3.35e-12!63;UBERON:0000153!7.17e-12!94;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0007811!1.41e-11!86;UBERON:0002616!1.75e-11!49;UBERON:0003056!1.98e-11!49;UBERON:0003080!3.62e-11!40;UBERON:0002780!1.33e-10!39;UBERON:0001890!1.33e-10!39;UBERON:0006240!1.33e-10!39;UBERON:0002020!3.76e-09!34;UBERON:0002346!3.85e-09!71;UBERON:0003075!3.85e-09!71;UBERON:0007284!3.85e-09!71;UBERON:0000025!1.09e-08!114;UBERON:0004111!2.33e-08!122;UBERON:0000483!2.98e-08!181;UBERON:0000119!5.13e-08!183;UBERON:0002791!1.03e-07!29;UBERON:0003528!1.03e-07!29;UBERON:0001893!1.03e-07!29;UBERON:0001017!2.43e-07!73;UBERON:0005743!2.43e-07!73;UBERON:0000475!3.19e-07!200;UBERON:0000477!5.03e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-13,54;UBERON:0001049,3.68e-13,52;UBERON:0005068,3.68e-13,52;UBERON:0006241,3.68e-13,52;UBERON:0007135,3.68e-13,52;UBERON:0002346,1.05e-11,64;UBERON:0003075,1.05e-11,64;UBERON:0007284,1.05e-11,64;UBERON:0000955,1.40e-11,47;UBERON:0006238,1.40e-11,47;UBERON:0003056,1.52e-11,49;UBERON:0002616,2.26e-11,46;UBERON:0003080,2.46e-11,40;UBERON:0010371,5.91e-11,73;UBERON:0002780,9.62e-11,39;UBERON:0001890,9.62e-11,39;UBERON:0006240,9.62e-11,39;UBERON:0000483,1.67e-09,174;UBERON:0000119,4.25e-09,176;UBERON:0002020,5.38e-09,34;UBERON:0000025,1.37e-08,114;UBERON:0001017,3.15e-08,73;UBERON:0004111,3.31e-08,122;UBERON:0003528,1.06e-07,29;UBERON:0002791,1.06e-07,29;UBERON:0001893,1.06e-07,29;UBERON:0010314,1.57e-07,92;UBERON:0001016,1.94e-07,75;UBERON:0004121,4.73e-07,95;UBERON:0000924,4.73e-07,95;UBERON:0006601,4.73e-07,95|phase1_expression=2.7225304007815,0.697950815278722,0,0,0.500895729946347,1.51091344720701,3.50418960893289,1.29123323441576,7.03943610758334,6.08567768437183,3.08192342805909,1.03703806693937,0.856003649656029,0.699363219351979,0,0.404950534779652,0.699561878128147,1.26184866143295,1.09691546884591,0,6.63337663178344,0.893618560807968,0.783599367416806,2.55987876469451,1.14704640533585,0.57423196411502,0,1.29282739611533,1.14014051673824,1.26015064879965,1.77384408524244,0,0,0,2.88851619751275,2.1610503896604,1.63335485009895,1.67412652294763,0.7813353445238,2.09409497589519,1.17646297606203,1.36609096991689,3.39857247121808,1.88845226963366,1.62203089951223,0.917733760808408,0,0.218025156380447,0.878744730937887,0.777719596297134,0.139986421625363,0,1.34226084846189,1.45072428402269,0,0.514518872071894,0.573066879877513,0,3.23706337375356,3.1739458756322,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,0,1.24427534770173,1.35005938331691,1.26194976810829,0.856952953211411,2.20868540951614,2.32732518508413,1.43768206527355,1.83843757322004,1.10115880999389,3.95830748064082,3.5329502648936,3.29715719325485,3.65950574409639,4.16730696445408,3.35019598801657,1.12552522006336,3.97275444219706,4.12480019663135,5.55249555116501,5.59198337475902,0.37863096666592,0.377857800533928,1.15945795480671,1.72084775396277,3.39985666853875,0.539703191637817,1.94932925234301,3.58421509677868,1.40444420131752,1.02258193546835,0.259786004602869,0,1.97180787687353,0,0,0,1.5154372870785,0.760079596425296,1.51657333504435,2.74041311325744,0.517875767294343,0.593768556259299,1.73485326766136,0.304465478312141,0.461230994512117,0.753613202763113,1.41106448562846,0.879666139307728,0.247194967734374,0.144599356919912,0,0.808834249737046,0.662524555381181,1.45462575940567,0,2.92780797011547,2.30391377494801,0.510914110417183,0.359445373517761,1.19980546198682,0.635351135365324,4.6435098215495,1.83000241127451,4.39790232395025,3.99795936442236,2.81287003063364,3.94797284663164,4.70499662896497,1.42575109390443,1.99051152976149,5.81262344397452,1.68353484709179,1.30120442962704,0.689706313300419,1.0803727788321,2.86339153887859,1.7009124787832,2.17793324484245,1.87403449119458,2.32833033665114,1.72454394346274,3.59301552318857,2.11141348996739,1.53437012699302,1.94633074457919,0.348252166522167,1.64625709126355,1.99034266818493,0.702213187313235,0.257347907114715,0.568326998791185,0.414251545071004,1.40715635988658,1.2604344302271,2.3674473558521,1.18058539048442,0.771335564436891,0.930135779001631,2.14618721119695,1.98501082024188,0.822799249567402,1.47750717671186,1.62137619091711,1.46199987425332,1.75640092232841,1.20785776884335,1.26173969138476,2.6755199218614,1.32167513193519,1.05780226665418,0.853153002140936,2.09013004674395,0.644337306610467,1.21010114774006,0.667134131534611,0.760902504450237,1.89811624617805,0.823494773620054,2.01068167040216,1.1937388322469,0.974820435595601,0.8988194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|EntrezGene=218693
|HGNC=
|MCL_coexpression_id=0
|UniProt=D3Z3J6
|association_with_transcript=-24bp_to_NM_001079849,uc007rzc.1_5end
|description=CAGE_peak_5_at_Paip1_5end
|id=chr13:120217368..120217382,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.08e-12!52;UBERON:0005068!1.08e-12!52;UBERON:0006241!1.08e-12!52;UBERON:0007135!1.08e-12!52;UBERON:0000033!3.35e-12!63;UBERON:0000153!7.17e-12!94;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0007811!1.41e-11!86;UBERON:0002616!1.75e-11!49;UBERON:0003056!1.98e-11!49;UBERON:0003080!3.62e-11!40;UBERON:0002780!1.33e-10!39;UBERON:0001890!1.33e-10!39;UBERON:0006240!1.33e-10!39;UBERON:0002020!3.76e-09!34;UBERON:0002346!3.85e-09!71;UBERON:0003075!3.85e-09!71;UBERON:0007284!3.85e-09!71;UBERON:0000025!1.09e-08!114;UBERON:0004111!2.33e-08!122;UBERON:0000483!2.98e-08!181;UBERON:0000119!5.13e-08!183;UBERON:0002791!1.03e-07!29;UBERON:0003528!1.03e-07!29;UBERON:0001893!1.03e-07!29;UBERON:0001017!2.43e-07!73;UBERON:0005743!2.43e-07!73;UBERON:0000475!3.19e-07!200;UBERON:0000477!5.03e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-13,54;UBERON:0001049,3.68e-13,52;UBERON:0005068,3.68e-13,52;UBERON:0006241,3.68e-13,52;UBERON:0007135,3.68e-13,52;UBERON:0002346,1.05e-11,64;UBERON:0003075,1.05e-11,64;UBERON:0007284,1.05e-11,64;UBERON:0000955,1.40e-11,47;UBERON:0006238,1.40e-11,47;UBERON:0003056,1.52e-11,49;UBERON:0002616,2.26e-11,46;UBERON:0003080,2.46e-11,40;UBERON:0010371,5.91e-11,73;UBERON:0002780,9.62e-11,39;UBERON:0001890,9.62e-11,39;UBERON:0006240,9.62e-11,39;UBERON:0000483,1.67e-09,174;UBERON:0000119,4.25e-09,176;UBERON:0002020,5.38e-09,34;UBERON:0000025,1.37e-08,114;UBERON:0001017,3.15e-08,73;UBERON:0004111,3.31e-08,122;UBERON:0003528,1.06e-07,29;UBERON:0002791,1.06e-07,29;UBERON:0001893,1.06e-07,29;UBERON:0010314,1.57e-07,92;UBERON:0001016,1.94e-07,75;UBERON:0004121,4.73e-07,95;UBERON:0000924,4.73e-07,95;UBERON:0006601,4.73e-07,95
|phase1_expression=2.7225304007815,0.697950815278722,0,0,0.500895729946347,1.51091344720701,3.50418960893289,1.29123323441576,7.03943610758334,6.08567768437183,3.08192342805909,1.03703806693937,0.856003649656029,0.699363219351979,0,0.404950534779652,0.699561878128147,1.26184866143295,1.09691546884591,0,6.63337663178344,0.893618560807968,0.783599367416806,2.55987876469451,1.14704640533585,0.57423196411502,0,1.29282739611533,1.14014051673824,1.26015064879965,1.77384408524244,0,0,0,2.88851619751275,2.1610503896604,1.63335485009895,1.67412652294763,0.7813353445238,2.09409497589519,1.17646297606203,1.36609096991689,3.39857247121808,1.88845226963366,1.62203089951223,0.917733760808408,0,0.218025156380447,0.878744730937887,0.777719596297134,0.139986421625363,0,1.34226084846189,1.45072428402269,0,0.514518872071894,0.573066879877513,0,3.23706337375356,3.1739458756322,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,0,1.24427534770173,1.35005938331691,1.26194976810829,0.856952953211411,2.20868540951614,2.32732518508413,1.43768206527355,1.83843757322004,1.10115880999389,3.95830748064082,3.5329502648936,3.29715719325485,3.65950574409639,4.16730696445408,3.35019598801657,1.12552522006336,3.97275444219706,4.12480019663135,5.55249555116501,5.59198337475902,0.37863096666592,0.377857800533928,1.15945795480671,1.72084775396277,3.39985666853875,0.539703191637817,1.94932925234301,3.58421509677868,1.40444420131752,1.02258193546835,0.259786004602869,0,1.97180787687353,0,0,0,1.5154372870785,0.760079596425296,1.51657333504435,2.74041311325744,0.517875767294343,0.593768556259299,1.73485326766136,0.304465478312141,0.461230994512117,0.753613202763113,1.41106448562846,0.879666139307728,0.247194967734374,0.144599356919912,0,0.808834249737046,0.662524555381181,1.45462575940567,0,2.92780797011547,2.30391377494801,0.510914110417183,0.359445373517761,1.19980546198682,0.635351135365324,4.6435098215495,1.83000241127451,4.39790232395025,3.99795936442236,2.81287003063364,3.94797284663164,4.70499662896497,1.42575109390443,1.99051152976149,5.81262344397452,1.68353484709179,1.30120442962704,0.689706313300419,1.0803727788321,2.86339153887859,1.7009124787832,2.17793324484245,1.87403449119458,2.32833033665114,1.72454394346274,3.59301552318857,2.11141348996739,1.53437012699302,1.94633074457919,0.348252166522167,1.64625709126355,1.99034266818493,0.702213187313235,0.257347907114715,0.568326998791185,0.414251545071004,1.40715635988658,1.2604344302271,2.3674473558521,1.18058539048442,0.771335564436891,0.930135779001631,2.14618721119695,1.98501082024188,0.822799249567402,1.47750717671186,1.62137619091711,1.46199987425332,1.75640092232841,1.20785776884335,1.26173969138476,2.6755199218614,1.32167513193519,1.05780226665418,0.853153002140936,2.09013004674395,0.644337306610467,1.21010114774006,0.667134131534611,0.760902504450237,1.89811624617805,0.823494773620054,2.01068167040216,1.1937388322469,0.974820435595601,0.898819408654221,1.51296634912286,1.1948476395262,0.379335801906163,1.14248512609729,2.25415471346161,1.22190796707189,1.35766741017338,1.96380295692892,1.3279672796094,1.62371162777562,1.8839847340965,2.09775178667061,1.48226313543574,0.166845105716094,0.589676985339609,0.899448449539415,0.202860121388503,1.4470629585145,1.2731292589071,0.863088412352432,3.72911021582581,3.29473695825698,2.87536413054709,3.72140947668503,3.43241440426017,1.76805214562978,1.4351793081753,1.92977408545347,0.739012760666419,1.89491411770485,0.651859905768103,1.35796068620151,0.704070744865506,1.50755631697634,2.14239276797412,2.14647012643579,1.10344600874334,1.10732344824387,0.478364305972461,0.327726629431476,1.03610989119537,0.433947175744535,0,0.54390568381871,0.983528546038072,0,1.9266070798535,3.5163505977661,0.327869890753351,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0.716906393857656,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0,1.92792789853084,0.851640511249612,2.49291845134157,2.93196526836437,0.164970122972535,0,1.45668381692989,2.41858845571801,2.45186603682668,0.295301892880773,0.614870295887855,1.29214146584111,0.727067458955011,1.42598951353889,0,0,0,2.38307724027652,2.34079422240703,1.16422815404479,1.71469628025274,5.49754724291048,1.96205699362278,1.81003922662333,4.56697423671899,0.938686832254841,1.27099242518292,0.661585194164886,0.32977250588296,1.13025098687134,1.80938774784468,1.67121281604391,1.80554989719567,1.1659233465194,2.59595422814714,0,1.03193433981611,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.679913719975421,1.39951452323658,1.38199973804424,0,1.10717597753397,1.21991680276109,1.08005340821801,1.25452977608681,0.436725127492355,0.944050424693745,0.991841468704031,0.785267825952089,0.388844919875379,1.86401793926078,33.2578833823672,2.69129782879162,1.48912641411388,1.55560950675238,1.03327858782185,2.19642963138012,0.938857909166032,0.651021924219751,4.61381115473128,32.3722721906848,23.618460513145,1.58005560314089,0.608175645870493,1.84879722896689,1.42912905275575,1.9692936523423,1.58945083825012,1.80293174279953,1.77227432609493,1.71642964911851,1.295515713135,1.81487133246313,1.8516997340553,1.34696578296461,2.22066114144981,0.226730383615211,5.32766288097755,5.65197296639697,3.02192309455341,0.965947970160952,0.187682475451182,0.915758121336325,0.214368379079066,2.00628841614145,3.3885110557024,4.60325236507177,4.58316410751517,3.78077001156113,2.74033007908257,3.7769694869485,2.70009000092722,2.2516060161211,3.17199686288943,4.14208249401456,1.14166082342594,1.19707462020309,1.36586884603307,2.18796045361465,1.04806581313991,0.919217542250071,0.888986911206461,2.47242068686673,0.64183841918363,0.758091635291392,0.50695859978048,0.943131706930381,1.31098110457835,0.960377286073039,0.459483751644906,0.476293691283074,0.927074607558844,1.35036454324594,0.412085900803307,2.20798380201596,0.342869252385415,1.24233064311536,2.62279808942053,1.16277133305863,0.188218760830661,1.60767754994185,1.46342378298218,1.8414879800649,1.22223702461276,1.12228454331548,1.30498519936592,0.985044823755635,1.63692417267876,0.77468420592983,1.54325288784913,0.999242311751784,1.87145286756327,2.36358159453128,1.72159498861959,0.661774257358546,1.39120701372253
|short_description=p5@Paip1
}}

Revision as of 23:59, 12 September 2013

Short description:p5@Paip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Paip1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -24bp_to_NM_001079849, uc007rzc.1_5end
EntrezGene:Paip1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Paip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G533.26
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D94.61
testis, neonate N20.CNhs11110.839-18H332.37
testis, neonate N30.CNhs11130.1391-42E223.62
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.62e-1354
neural tube3.68e-1352
neural rod3.68e-1352
future spinal cord3.68e-1352
neural keel3.68e-1352
neurectoderm1.05e-1164
neural plate1.05e-1164
presumptive neural plate1.05e-1164
brain1.40e-1147
future brain1.40e-1147
pre-chordal neural plate1.52e-1149
regional part of brain2.26e-1146
anterior neural tube2.46e-1140
ecto-epithelium5.91e-1173
regional part of forebrain9.62e-1139
forebrain9.62e-1139
future forebrain9.62e-1139
epithelium1.67e-09174
cell layer4.25e-09176
gray matter5.38e-0934
tube1.37e-08114
central nervous system3.15e-0873
anatomical conduit3.31e-08122
brain grey matter1.06e-0729
regional part of telencephalon1.06e-0729
telencephalon1.06e-0729
structure with developmental contribution from neural crest1.57e-0792
nervous system1.94e-0775
ectoderm-derived structure4.73e-0795
ectoderm4.73e-0795
presumptive ectoderm4.73e-0795







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