FFCP PHASE1:Mm9::chr13:109240094..109240107,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=238871|HGNC=|MCL_coexpression_id=10|UniProt=|association_with_transcript=-34bp_to_ENSMUST00000133929_5end|description=CAGE_peak_34_at_Pde4d_5end|id=chr13:109240094..109240107,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!8.77e-13!18;UBERON:0000948!8.77e-13!18;UBERON:0005498!8.77e-13!18;UBERON:0004140!8.77e-13!18;UBERON:0009881!8.77e-13!18;UBERON:0004141!8.77e-13!18;UBERON:0003084!8.77e-13!18;UBERON:0007005!8.77e-13!18;UBERON:0004139!8.77e-13!18;UBERON:0004291!8.77e-13!18;UBERON:0004535!1.20e-10!23;UBERON:0001009!1.20e-10!23;UBERON:0003103!6.27e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.82e-20,18;UBERON:0000948,1.82e-20,18;UBERON:0005498,1.82e-20,18;UBERON:0004140,1.82e-20,18;UBERON:0009881,1.82e-20,18;UBERON:0004141,1.82e-20,18;UBERON:0003084,1.82e-20,18;UBERON:0007005,1.82e-20,18;UBERON:0004139,1.82e-20,18;UBERON:0004291,1.82e-20,18;UBERON:0004535,7.44e-16,23;UBERON:0001009,7.44e-16,23;UBERON:0004872,8.33e-11,33;UBERON:0003103,4.29e-08,43;UBERON:0002367,2.11e-07,1;UBERON:0009846,2.11e-07,1;UBERON:0003353,2.11e-07,1;UBERON:0004902,2.11e-07,1;UBERON:0003820,2.11e-07,1;UBERON:0009847,2.11e-07,1;UBERON:0003914,2.49e-07,47;UBERON:0001044,4.21e-07,1;UBERON:0001736,4.21e-07,1;UBERON:0003293,4.21e-07,1;UBERON:0003294,4.21e-07,1;UBERON:0001829,4.21e-07,1;UBERON:0010047,4.21e-07,1;UBERON:0000167,4.21e-07,1;UBERON:0006298,4.21e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0.946978942340841,0.983821158737019,0.771335564436891,1.62773761325285,1.07309360559848,2.33530684734339,0.822799249567402,3.447516745661,3.64809642956351,5.26319954731196,3.51280184465681,5.50246316917524,0,0,0,0,0,0,0,0.201683524623343,0,0.760902504450237,0,0.494096864172033,2.26201687920243,1.59165177632921,1.55971269695296,0,0,0,0,0,0,0.203651327845314,0,0,0,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52845436887939,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,3.81868247206045,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.743881101528023,1.83229159388821,0,1.86401793926078,0,0,0,0,0,0,0,0,0.104859344425711,0.724752362478018,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.436039249896986,0.282328141245992,0.169229215783353,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p34@Pde4d}} | ||
|EntrezGene=238871 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENSMUST00000133929_5end | |||
|description=CAGE_peak_34_at_Pde4d_5end | |||
|id=chr13:109240094..109240107,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.77e-13!18;UBERON:0000948!8.77e-13!18;UBERON:0005498!8.77e-13!18;UBERON:0004140!8.77e-13!18;UBERON:0009881!8.77e-13!18;UBERON:0004141!8.77e-13!18;UBERON:0003084!8.77e-13!18;UBERON:0007005!8.77e-13!18;UBERON:0004139!8.77e-13!18;UBERON:0004291!8.77e-13!18;UBERON:0004535!1.20e-10!23;UBERON:0001009!1.20e-10!23;UBERON:0003103!6.27e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.82e-20,18;UBERON:0000948,1.82e-20,18;UBERON:0005498,1.82e-20,18;UBERON:0004140,1.82e-20,18;UBERON:0009881,1.82e-20,18;UBERON:0004141,1.82e-20,18;UBERON:0003084,1.82e-20,18;UBERON:0007005,1.82e-20,18;UBERON:0004139,1.82e-20,18;UBERON:0004291,1.82e-20,18;UBERON:0004535,7.44e-16,23;UBERON:0001009,7.44e-16,23;UBERON:0004872,8.33e-11,33;UBERON:0003103,4.29e-08,43;UBERON:0002367,2.11e-07,1;UBERON:0009846,2.11e-07,1;UBERON:0003353,2.11e-07,1;UBERON:0004902,2.11e-07,1;UBERON:0003820,2.11e-07,1;UBERON:0009847,2.11e-07,1;UBERON:0003914,2.49e-07,47;UBERON:0001044,4.21e-07,1;UBERON:0001736,4.21e-07,1;UBERON:0003293,4.21e-07,1;UBERON:0003294,4.21e-07,1;UBERON:0001829,4.21e-07,1;UBERON:0010047,4.21e-07,1;UBERON:0000167,4.21e-07,1;UBERON:0006298,4.21e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0.946978942340841,0.983821158737019,0.771335564436891,1.62773761325285,1.07309360559848,2.33530684734339,0.822799249567402,3.447516745661,3.64809642956351,5.26319954731196,3.51280184465681,5.50246316917524,0,0,0,0,0,0,0,0.201683524623343,0,0.760902504450237,0,0.494096864172033,2.26201687920243,1.59165177632921,1.55971269695296,0,0,0,0,0,0,0.203651327845314,0,0,0,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52845436887939,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,3.81868247206045,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.743881101528023,1.83229159388821,0,1.86401793926078,0,0,0,0,0,0,0,0,0.104859344425711,0.724752362478018,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.436039249896986,0.282328141245992,0.169229215783353,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p34@Pde4d | |||
}} |
Revision as of 23:49, 12 September 2013
Short description: | p34@Pde4d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_Pde4d_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | -34bp_to_ENSMUST00000133929_5end |
EntrezGene: | Pde4d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.82e-20 | 18 |
heart | 1.82e-20 | 18 |
primitive heart tube | 1.82e-20 | 18 |
primary heart field | 1.82e-20 | 18 |
anterior lateral plate mesoderm | 1.82e-20 | 18 |
heart tube | 1.82e-20 | 18 |
heart primordium | 1.82e-20 | 18 |
cardiac mesoderm | 1.82e-20 | 18 |
cardiogenic plate | 1.82e-20 | 18 |
heart rudiment | 1.82e-20 | 18 |
cardiovascular system | 7.44e-16 | 23 |
circulatory system | 7.44e-16 | 23 |
splanchnic layer of lateral plate mesoderm | 8.33e-11 | 33 |
compound organ | 4.29e-08 | 43 |
prostate gland | 2.11e-07 | 1 |
embryonic cloacal epithelium | 2.11e-07 | 1 |
epithelium of hindgut | 2.11e-07 | 1 |
urogenital sinus epithelium | 2.11e-07 | 1 |
prostate bud | 2.11e-07 | 1 |
prostate field | 2.11e-07 | 1 |
epithelial tube | 2.49e-07 | 47 |
saliva-secreting gland | 4.21e-07 | 1 |
submandibular gland | 4.21e-07 | 1 |
gland of oral region | 4.21e-07 | 1 |
gland of foregut | 4.21e-07 | 1 |
major salivary gland | 4.21e-07 | 1 |
oral gland | 4.21e-07 | 1 |
oral cavity | 4.21e-07 | 1 |
submandibular gland primordium | 4.21e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.