FFCP PHASE1:Mm9::chr13:100204365..100204388,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100204365..100204388,-|id=chr13:100204365..100204388,-|ontology_enrichment_celltype=CL:0000117!4.39e-14!23;CL:0000337!4.39e-14!23;CL:0000540!1.21e-13!33;CL:0000047!1.21e-13!33;CL:0000031!1.21e-13!33;CL:0000404!1.21e-13!33;CL:0000393!1.17e-09!39;CL:0000211!1.17e-09!39;CL:0000221!2.08e-08!44;CL:0000133!2.08e-08!44;CL:0002319!2.24e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.26e-23,23;CL:0000337,3.26e-23,23;CL:0000540,8.92e-18,33;CL:0000047,8.92e-18,33;CL:0000031,8.92e-18,33;CL:0000404,8.92e-18,33;CL:0000393,9.28e-14,39;CL:0000211,9.28e-14,39;CL:0002319,9.87e-12,43;CL:0000221,2.75e-11,44;CL:0000133,2.75e-11,44;CL:0002609,6.19e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.22e-27!71;UBERON:0003075!3.22e-27!71;UBERON:0007284!3.22e-27!71;UBERON:0004121!5.73e-24!102;UBERON:0000924!5.73e-24!102;UBERON:0006601!5.73e-24!102;UBERON:0001017!1.19e-23!73;UBERON:0005743!1.19e-23!73;UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0001049!1.53e-22!52;UBERON:0005068!1.53e-22!52;UBERON:0006241!1.53e-22!52;UBERON:0007135!1.53e-22!52;UBERON:0000033!1.60e-21!63;UBERON:0003056!3.34e-21!49;UBERON:0000955!4.10e-21!50;UBERON:0006238!4.10e-21!50;UBERON:0002616!7.96e-21!49;UBERON:0003080!7.39e-19!40;UBERON:0002020!9.41e-19!34;UBERON:0002780!2.16e-18!39;UBERON:0001890!2.16e-18!39;UBERON:0006240!2.16e-18!39;UBERON:0002791!1.02e-15!29;UBERON:0003528!1.02e-15!29;UBERON:0001893!1.02e-15!29;UBERON:0000956!1.63e-11!21;UBERON:0001869!1.63e-11!21;UBERON:0000203!1.63e-11!21;UBERON:0007811!2.62e-10!86;UBERON:0000025!2.10e-09!114;UBERON:0002619!2.96e-09!17;UBERON:0000153!7.09e-09!94;UBERON:0002021!1.96e-08!10;UBERON:0000411!1.96e-08!10;UBERON:0001950!1.96e-08!10;UBERON:0004111!4.04e-08!122;UBERON:0000468!4.76e-08!333;UBERON:0000922!5.24e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.38e-36,64;UBERON:0003075,3.38e-36,64;UBERON:0007284,3.38e-36,64;UBERON:0000073,8.38e-35,54;UBERON:0001049,2.41e-32,52;UBERON:0005068,2.41e-32,52;UBERON:0006241,2.41e-32,52;UBERON:0007135,2.41e-32,52;UBERON:0001017,1.74e-31,73;UBERON:0001016,3.31e-30,75;UBERON:0003056,3.54e-30,49;UBERON:0002020,7.14e-30,34;UBERON:0010371,1.01e-29,73;UBERON:0004121,4.67e-29,95;UBERON:0000924,4.67e-29,95;UBERON:0006601,4.67e-29,95;UBERON:0002616,4.15e-26,46;UBERON:0010314,5.23e-26,92;UBERON:0003080,7.07e-26,40;UBERON:0000955,2.72e-25,47;UBERON:0006238,2.72e-25,47;UBERON:0002780,4.34e-25,39;UBERON:0001890,4.34e-25,39;UBERON:0006240,4.34e-25,39;UBERON:0003528,1.22e-24,29;UBERON:0002791,1.22e-24,29;UBERON:0001893,1.22e-24,29;UBERON:0000956,7.42e-19,21;UBERON:0001869,7.42e-19,21;UBERON:0000203,7.42e-19,21;UBERON:0002619,5.99e-15,17;UBERON:0002021,1.93e-13,10;UBERON:0000411,1.93e-13,10;UBERON:0001950,1.93e-13,10;UBERON:0000025,8.65e-11,114;UBERON:0004111,3.27e-09,122;UBERON:0002240,2.71e-07,6;UBERON:0005174,2.71e-07,6;UBERON:0001137,2.71e-07,6;UBERON:0002420,6.46e-07,8;UBERON:0007245,6.46e-07,8;UBERON:0010009,6.46e-07,8;UBERON:0010011,6.46e-07,8;UBERON:0000454,6.46e-07,8;UBERON:0003076,7.02e-07,12;UBERON:0003057,7.02e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,2.83243045203437,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,6.53244557543409,5.8052553482627,3.78584930432488,2.28520787523043,1.32521124570968,1.83736198822431,1.91690942036473,1.83843757322004,2.20231761998777,11.8749224419225,10.4452442614246,2.63772575460388,3.47653045689157,7.8137005583514,3.07101298901519,1.12552522006336,6.41752640662602,13.5529149317887,8.96941589034349,4.84638559145781,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.693941307064543,0.913396434936424,1.38369298353635,1.3565037649736,1.99900802130698,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,2.92780797011547,0.83778682725382,0,0,0,0,1.64769703345305,0.915001205637253,10.5549655774806,1.56441888173049,6.39288643325826,1.87009240103604,3.73154905055843,0.916554274652847,0,0.758168275301024,0.210441855886474,1.56144531555244,0,1.26043490863744,3.31550599238573,2.38127747029647,4.35586648968489,1.3118241438362,3.10444044886819,0,0.189106080167819,0.175951124163949,0.219195732427575,1.11218899690239,0,0,0.199034266818493,0,0,0,0,0.703578179943289,0.540186184383045,0.23674473558521,1.77087808572663,0.925602677324269,1.62773761325285,0.268273401399619,0.233530684734339,0.822799249567402,0.820837320395476,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,1.68231958851302,13.2746949969277,0,0,0.853153002140936,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0.949058123089023,0.164698954724011,1.00534083520108,0,0,0,0.4322760997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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100204365..100204388,- | |||
|id=chr13:100204365..100204388,- | |||
|ontology_enrichment_celltype=CL:0000117!4.39e-14!23;CL:0000337!4.39e-14!23;CL:0000540!1.21e-13!33;CL:0000047!1.21e-13!33;CL:0000031!1.21e-13!33;CL:0000404!1.21e-13!33;CL:0000393!1.17e-09!39;CL:0000211!1.17e-09!39;CL:0000221!2.08e-08!44;CL:0000133!2.08e-08!44;CL:0002319!2.24e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.26e-23,23;CL:0000337,3.26e-23,23;CL:0000540,8.92e-18,33;CL:0000047,8.92e-18,33;CL:0000031,8.92e-18,33;CL:0000404,8.92e-18,33;CL:0000393,9.28e-14,39;CL:0000211,9.28e-14,39;CL:0002319,9.87e-12,43;CL:0000221,2.75e-11,44;CL:0000133,2.75e-11,44;CL:0002609,6.19e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.22e-27!71;UBERON:0003075!3.22e-27!71;UBERON:0007284!3.22e-27!71;UBERON:0004121!5.73e-24!102;UBERON:0000924!5.73e-24!102;UBERON:0006601!5.73e-24!102;UBERON:0001017!1.19e-23!73;UBERON:0005743!1.19e-23!73;UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0001049!1.53e-22!52;UBERON:0005068!1.53e-22!52;UBERON:0006241!1.53e-22!52;UBERON:0007135!1.53e-22!52;UBERON:0000033!1.60e-21!63;UBERON:0003056!3.34e-21!49;UBERON:0000955!4.10e-21!50;UBERON:0006238!4.10e-21!50;UBERON:0002616!7.96e-21!49;UBERON:0003080!7.39e-19!40;UBERON:0002020!9.41e-19!34;UBERON:0002780!2.16e-18!39;UBERON:0001890!2.16e-18!39;UBERON:0006240!2.16e-18!39;UBERON:0002791!1.02e-15!29;UBERON:0003528!1.02e-15!29;UBERON:0001893!1.02e-15!29;UBERON:0000956!1.63e-11!21;UBERON:0001869!1.63e-11!21;UBERON:0000203!1.63e-11!21;UBERON:0007811!2.62e-10!86;UBERON:0000025!2.10e-09!114;UBERON:0002619!2.96e-09!17;UBERON:0000153!7.09e-09!94;UBERON:0002021!1.96e-08!10;UBERON:0000411!1.96e-08!10;UBERON:0001950!1.96e-08!10;UBERON:0004111!4.04e-08!122;UBERON:0000468!4.76e-08!333;UBERON:0000922!5.24e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.38e-36,64;UBERON:0003075,3.38e-36,64;UBERON:0007284,3.38e-36,64;UBERON:0000073,8.38e-35,54;UBERON:0001049,2.41e-32,52;UBERON:0005068,2.41e-32,52;UBERON:0006241,2.41e-32,52;UBERON:0007135,2.41e-32,52;UBERON:0001017,1.74e-31,73;UBERON:0001016,3.31e-30,75;UBERON:0003056,3.54e-30,49;UBERON:0002020,7.14e-30,34;UBERON:0010371,1.01e-29,73;UBERON:0004121,4.67e-29,95;UBERON:0000924,4.67e-29,95;UBERON:0006601,4.67e-29,95;UBERON:0002616,4.15e-26,46;UBERON:0010314,5.23e-26,92;UBERON:0003080,7.07e-26,40;UBERON:0000955,2.72e-25,47;UBERON:0006238,2.72e-25,47;UBERON:0002780,4.34e-25,39;UBERON:0001890,4.34e-25,39;UBERON:0006240,4.34e-25,39;UBERON:0003528,1.22e-24,29;UBERON:0002791,1.22e-24,29;UBERON:0001893,1.22e-24,29;UBERON:0000956,7.42e-19,21;UBERON:0001869,7.42e-19,21;UBERON:0000203,7.42e-19,21;UBERON:0002619,5.99e-15,17;UBERON:0002021,1.93e-13,10;UBERON:0000411,1.93e-13,10;UBERON:0001950,1.93e-13,10;UBERON:0000025,8.65e-11,114;UBERON:0004111,3.27e-09,122;UBERON:0002240,2.71e-07,6;UBERON:0005174,2.71e-07,6;UBERON:0001137,2.71e-07,6;UBERON:0002420,6.46e-07,8;UBERON:0007245,6.46e-07,8;UBERON:0010009,6.46e-07,8;UBERON:0010011,6.46e-07,8;UBERON:0000454,6.46e-07,8;UBERON:0003076,7.02e-07,12;UBERON:0003057,7.02e-07,12 | |||
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|short_description=p@chr13:100204365..100204388,- | |||
}} |
Revision as of 23:41, 12 September 2013
Short description: | p@chr13:100204365..100204388, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100204365..100204388, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.26e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.26e-23 | 23 |
neuron | 8.92e-18 | 33 |
neuronal stem cell | 8.92e-18 | 33 |
neuroblast | 8.92e-18 | 33 |
electrically signaling cell | 8.92e-18 | 33 |
electrically responsive cell | 9.28e-14 | 39 |
electrically active cell | 9.28e-14 | 39 |
neural cell | 9.87e-12 | 43 |
ectodermal cell | 2.75e-11 | 44 |
neurectodermal cell | 2.75e-11 | 44 |
neuron of cerebral cortex | 6.19e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.