FFCP PHASE1:Hg19::chr3:197282821..197282869,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=622 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1027 | |||
|TSSclassifier=S | |||
|UniProt=Q02338,C9JQ90,E9PCG9,C9JB83,C9K0G7 | |||
|association_with_transcript=0bp_to_ENST00000392379,ENST00000432819,ENST00000441275,ENST00000445160,ENST00000446746,ENST00000468710,ENST00000492681,NM_004051,NM_203314,uc003fxr.2,uc003fxs.2,uc003fxt.2_5end | |||
|description=CAGE_peak_1_at_BDH1_5end | |||
|id=chr3:197282821..197282869,- | |||
|ontology_enrichment_celltype=CL:0000542!8.04e-09!53;CL:0000051!8.04e-09!53;CL:0000838!1.76e-08!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.15e-09,53;CL:0000051,6.15e-09,53;CL:0000838,1.35e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.30e-08!51;DOID:0060083!1.30e-08!51;DOID:1240!2.16e-08!39;DOID:8692!8.16e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.27e-09,51;DOID:0060083,7.27e-09,51;DOID:1240,1.26e-08,39;DOID:8692,4.83e-07,31 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;5.05e-10;32!UBERON:0001893;9.07e-10;34!UBERON:0002791;1.79e-09;32!UBERON:0002619;2.09e-09;22!UBERON:0003528;2.71e-09;34!UBERON:0002020;2.71e-09;34!UBERON:0001950;8.83e-09;20!UBERON:0002780;1.18e-08;41!UBERON:0001890;1.18e-08;41!UBERON:0000956;1.63e-08;25!UBERON:0000203;1.63e-08;25!UBERON:0000073;4.10e-08;53!UBERON:0002616;4.10e-08;53 | |||
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| |||
|short_description=p1@BDH1 | |||
}} |
Revision as of 23:36, 12 September 2013
Short description: | p1@BDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392379, ENST00000432819, ENST00000441275, ENST00000445160, ENST00000446746, ENST00000468710, ENST00000492681, NM_004051, NM_203314, uc003fxr.2, uc003fxs.2, uc003fxt.2_5end |
EntrezGene: | BDH1 |
HGNC: | 1027 |
UniProt: | Q02338C9JQ90E9PCG9C9JB83C9K0G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.15e-09 | 53 |
common lymphoid progenitor | 6.15e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.35e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.83e-18 | 114 |
neural tube | 1.56e-14 | 56 |
neural rod | 1.56e-14 | 56 |
future spinal cord | 1.56e-14 | 56 |
neural keel | 1.56e-14 | 56 |
regional part of nervous system | 2.64e-14 | 53 |
regional part of brain | 2.64e-14 | 53 |
ecto-epithelium | 3.51e-12 | 104 |
regional part of forebrain | 1.12e-11 | 41 |
forebrain | 1.12e-11 | 41 |
anterior neural tube | 1.12e-11 | 41 |
future forebrain | 1.12e-11 | 41 |
brain | 2.34e-11 | 68 |
future brain | 2.34e-11 | 68 |
neurectoderm | 4.64e-11 | 86 |
telencephalon | 5.28e-11 | 34 |
cerebral hemisphere | 5.90e-11 | 32 |
neural plate | 6.87e-11 | 82 |
presumptive neural plate | 6.87e-11 | 82 |
nervous system | 7.16e-11 | 89 |
brain grey matter | 1.45e-10 | 34 |
gray matter | 1.45e-10 | 34 |
regional part of telencephalon | 2.65e-10 | 32 |
central nervous system | 4.55e-10 | 81 |
ectoderm-derived structure | 6.20e-10 | 171 |
ectoderm | 6.20e-10 | 171 |
presumptive ectoderm | 6.20e-10 | 171 |
regional part of cerebral cortex | 2.18e-09 | 22 |
organ system subdivision | 5.05e-09 | 223 |
pre-chordal neural plate | 7.22e-09 | 61 |
neocortex | 9.18e-09 | 20 |
cerebral cortex | 1.63e-08 | 25 |
pallium | 1.63e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.27e-09 | 51 |
immune system cancer | 7.27e-09 | 51 |
leukemia | 1.26e-08 | 39 |
myeloid leukemia | 4.83e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.