FFCP PHASE1:Hg19::chr3:195163669..195163683,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23527|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16469|TSSclassifier=S|UniProt=F8WAU0|association_with_transcript=-35bp_to_ENST00000447662_5end|description=CAGE_peak_4_at_ACAP2_5end|id=chr3:195163669..195163683,-|ontology_enrichment_celltype=CL:0000860!2.87e-15!45;CL:0002057!3.04e-14!42;CL:0000766!1.95e-13!76;CL:0000763!2.04e-13!112;CL:0000049!2.04e-13!112;CL:0002009!3.40e-13!65;CL:0002194!3.12e-12!63;CL:0000576!3.12e-12!63;CL:0000040!3.12e-12!63;CL:0000559!3.12e-12!63;CL:0000557!9.66e-12!71;CL:0000839!1.51e-10!70;CL:0002032!1.02e-07!165;CL:0000837!1.02e-07!165;CL:0000037!3.02e-07!172;CL:0000566!3.02e-07!172;CL:0000738!9.25e-07!140|ontology_enrichment_celltype_v019=CL:0000860;9.28e-12;33!CL:0002057;9.28e-12;33!CL:0000576;8.72e-10;48!CL:0000473;3.14e-09;39!CL:0000234;3.14e-09;39|ontology_enrichment_celltype_v019_2=CL:0000860,7.51e-15,42;CL:0002057,7.51e-15,42;CL:0000473,8.77e-14,48;CL:0000234,8.77e-14,48;CL:0000766,1.77e-13,72;CL:0002009,2.86e-13,61;CL:0000763,7.86e-13,108;CL:0000049,7.86e-13,108;CL:0002194,2.93e-12,59;CL:0000576,2.93e-12,59;CL:0000040,2.93e-12,59;CL:0000559,2.93e-12,59;CL:0000557,1.05e-11,67;CL:0000839,1.87e-10,66;CL:0002032,1.80e-07,161;CL:0000837,1.80e-07,161;CL:0000037,6.12e-07,168;CL:0000738,8.74e-07,136|ontology_enrichment_development_v019=CL:0002057;1.13e-10;42|ontology_enrichment_disease=DOID:14566!6.10e-10!239;DOID:162!9.96e-10!235;DOID:305!7.45e-09!106;DOID:0050687!7.73e-09!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,1.00e-07,239;DOID:162,1.33e-07,235;DOID:305,1.88e-07,106;DOID:0050687,2.32e-07,143|ontology_enrichment_uberon=UBERON:0002390!5.62e-11!102;UBERON:0003061!5.62e-11!102;UBERON:0001474!6.62e-10!86;UBERON:0002193!1.08e-09!112;UBERON:0002371!1.58e-09!80;UBERON:0007023!2.69e-08!115;UBERON:0004765!3.39e-07!101;UBERON:0001434!3.39e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.21e-11,98;UBERON:0003061,4.21e-11,98;UBERON:0001474,4.86e-10,82;UBERON:0002371,9.38e-10,76;UBERON:0002193,9.59e-10,108;UBERON:0007023,1.47e-08,114;UBERON:0002405,8.79e-08,93;UBERON:0004765,3.06e-07,90|phase1_expression=1.81678379270557,2.78330681058278,3.94672331468719,1.0007329835313,2.23480547213644,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0.655324116390517,0,0.495065411840187,0.994192127183747,0.672325146451775,1.20538905604795,1.46062018077475,1.46379839637152,0.123121058076788,0,0.313454721478088,0.85870796139317,0.547497700291537,0.627713197974014,0.916960868975415,1.14940825229924,1.02324015707783,1.96682138424452,4.60595277716655,1.85779347979291,0,1.204823675113,1.10926203050036,2.24654881682875,2.27470771979874,1.76160263600908,5.53995408531877,3.40925560699241,2.82114131930607,3.35873211359887,3.56283032620878,4.37878464978117,5.67053131240302,3.77875943688809,2.91100873425379,4.41615170120801,4.11167888021826,3.71647645074124,3.16461631554365,1.7931249457037,3.54723344832878,2.75796544589295,2.5819387343353,1.35426486594342,3.9530891303947,3.82068610080984,4.49446968890169,4.28517449319264,5.77672248736969,8.31138263538754,7.25672860410775,4.58766412529753,3.40979800426155,3.19230162491442,2.8369261234557,1.86846674698672,2.00998932205395,1.0429658368404,2.38907729175628,4.23779651843358,2.94622108790052,3.79754864929061,2.11255286311942,1.91343869968539,2.72556239160889,2.80821577866238,2.4028302854641,4.33959084082116,1.42506371870624,2.38700012638908,2.00930569141097,0,1.09227722252426,0,1.70692089026603,0.800791974072025,0,1.32208974556972,0,1.70763890732835,2.34894875748376,2.6759125968766,1.32171328579026,1.68152568894461,1.31692042387539,0.590129310341499,0.393010762749165,1.23360899399706,0.167186495390678,0,0.473447805734733,0,0.891283655081389,0.883817722424512,0.221533894583621,0.270803863765016,0.384273959177026,0.130059347559878,0.822189523018381,0,0,0.14828656316206,0.267540828089713,0,0.566546713487831,0.383220493601921,0.68725489096526,0.253019692019503,0.637130828648193,1.30216690771284,0,0,0.76791966692651,0,0.473554504088034,0.821127996921047,2.82249440514625,1.33720097891754,1.73789284659359,4.87613732627923,2.01210257911091,1.15076305659177,1.44575660953827,0.50133791063589,0.724232594804119,1.5905718941022,0.486634870302636,1.03988298880475,0.665188192387692,0.263504357079378,1.0478326039817,0.728590576585084,0,1.62273696827342,1.56716763569341,2.12732736830184,0.715471872916026,0,0.74291500265913,0.993812036833525,0,1.04142150482278,2.26123176769604,1.25849830862972,1.37559020970034,0.835979866147242,1.55050055501597,1.77883131343355,3.3472061276467,0.805658634218294,0,0,0.735326160691737,0,1.42879565254528,1.12264686313085,1.23872628531654,1.53316637465883,0.949265659568129,1.28241220751285,7.9068250461638,11.6334079244498,0.436094052142534,1.49091585508596,1.39293562831038,3.17782033951725,0.860509862246441,1.06400514659507,0,1.06748995729705,0.74000264525148,3.11211035399766,1.75123873690594,1.4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64376399,1.09726132484042,1.29485767437579,0.410651227424988,1.1598144313382,1.94284397223656,3.04121302500737,0.994753875806841,0.594600453887843,3.50132854320776,1.31928620094515,1.66059127923341,4.01305622161312,2.18559560503957,2.82190377816914,1.71603825227734,2.35676547101626,4.71140321075869,1.48523200163543,2.5359343655004,1.86919826156599,2.6315497034359,1.48253142339228,1.69899965072379,3.21397089490184,3.17605384544123,3.12941330087756,2.92134555298607,3.66983426723633,2.43677291357467,1.89325874631822,0.475940431336403,0,1.5870805215462,0.743990036333503,0,1.29787968637137,1.64016352285603,0.98339014767326,1.39368351112581,2.75369840303351,2.93939145792117,5.97316846976492,1.75495277504663,1.28823786971007,0.535928260312357,2.48750831837634,1.96522692137601,1.49263787330687,2.61870874610114,0.322944549180031,0.806971285846153,2.01837352645104,1.59117895695412,1.0105859447911,2.39488422686657,0,2.42467390852515,1.79305513481691,0.99798106963804,1.46525883499754,5.12291260213034,5.7921684686082,1.07790242527904,0,2.2003459952916,1.62758471326295,5.3260541934841,1.00636896795513,0.641136984606466|short_description=p4@ACAP2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23527 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16469 | |||
|TSSclassifier=S | |||
|UniProt=F8WAU0 | |||
|association_with_transcript=-35bp_to_ENST00000447662_5end | |||
|description=CAGE_peak_4_at_ACAP2_5end | |||
|id=chr3:195163669..195163683,- | |||
|ontology_enrichment_celltype=CL:0000860!2.87e-15!45;CL:0002057!3.04e-14!42;CL:0000766!1.95e-13!76;CL:0000763!2.04e-13!112;CL:0000049!2.04e-13!112;CL:0002009!3.40e-13!65;CL:0002194!3.12e-12!63;CL:0000576!3.12e-12!63;CL:0000040!3.12e-12!63;CL:0000559!3.12e-12!63;CL:0000557!9.66e-12!71;CL:0000839!1.51e-10!70;CL:0002032!1.02e-07!165;CL:0000837!1.02e-07!165;CL:0000037!3.02e-07!172;CL:0000566!3.02e-07!172;CL:0000738!9.25e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.28e-12;33!CL:0002057;9.28e-12;33!CL:0000576;8.72e-10;48!CL:0000473;3.14e-09;39!CL:0000234;3.14e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.51e-15,42;CL:0002057,7.51e-15,42;CL:0000473,8.77e-14,48;CL:0000234,8.77e-14,48;CL:0000766,1.77e-13,72;CL:0002009,2.86e-13,61;CL:0000763,7.86e-13,108;CL:0000049,7.86e-13,108;CL:0002194,2.93e-12,59;CL:0000576,2.93e-12,59;CL:0000040,2.93e-12,59;CL:0000559,2.93e-12,59;CL:0000557,1.05e-11,67;CL:0000839,1.87e-10,66;CL:0002032,1.80e-07,161;CL:0000837,1.80e-07,161;CL:0000037,6.12e-07,168;CL:0000738,8.74e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-10;42 | |||
|ontology_enrichment_disease=DOID:14566!6.10e-10!239;DOID:162!9.96e-10!235;DOID:305!7.45e-09!106;DOID:0050687!7.73e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.00e-07,239;DOID:162,1.33e-07,235;DOID:305,1.88e-07,106;DOID:0050687,2.32e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.62e-11!102;UBERON:0003061!5.62e-11!102;UBERON:0001474!6.62e-10!86;UBERON:0002193!1.08e-09!112;UBERON:0002371!1.58e-09!80;UBERON:0007023!2.69e-08!115;UBERON:0004765!3.39e-07!101;UBERON:0001434!3.39e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.21e-11,98;UBERON:0003061,4.21e-11,98;UBERON:0001474,4.86e-10,82;UBERON:0002371,9.38e-10,76;UBERON:0002193,9.59e-10,108;UBERON:0007023,1.47e-08,114;UBERON:0002405,8.79e-08,93;UBERON:0004765,3.06e-07,90 | |||
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| |||
|short_description=p4@ACAP2 | |||
}} |
Revision as of 23:29, 12 September 2013
Short description: | p4@ACAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ACAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000447662_5end |
EntrezGene: | ACAP2 |
HGNC: | 16469 |
UniProt: | F8WAU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.51e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.51e-15 | 42 |
defensive cell | 8.77e-14 | 48 |
phagocyte | 8.77e-14 | 48 |
myeloid leukocyte | 1.77e-13 | 72 |
macrophage dendritic cell progenitor | 2.86e-13 | 61 |
myeloid cell | 7.86e-13 | 108 |
common myeloid progenitor | 7.86e-13 | 108 |
monopoietic cell | 2.93e-12 | 59 |
monocyte | 2.93e-12 | 59 |
monoblast | 2.93e-12 | 59 |
promonocyte | 2.93e-12 | 59 |
granulocyte monocyte progenitor cell | 1.05e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.87e-10 | 66 |
hematopoietic oligopotent progenitor cell | 1.80e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-07 | 161 |
hematopoietic stem cell | 6.12e-07 | 168 |
leukocyte | 8.74e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.21e-11 | 98 |
blood island | 4.21e-11 | 98 |
bone element | 4.86e-10 | 82 |
bone marrow | 9.38e-10 | 76 |
hemolymphoid system | 9.59e-10 | 108 |
adult organism | 1.47e-08 | 114 |
immune system | 8.79e-08 | 93 |
skeletal element | 3.06e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.00e-07 | 239 |
cancer | 1.33e-07 | 235 |
carcinoma | 1.88e-07 | 106 |
cell type cancer | 2.32e-07 | 143 |
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