FFCP PHASE1:Mm9::chr12:81216118..81216165,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:81216118..81216165,+|id=chr12:81216118..81216165,+|ontology_enrichment_celltype=CL:0000791!1.87e-07!9;CL:0000789!1.87e-07!9;CL:0002420!1.87e-07!9;CL:0002419!1.87e-07!9;CL:0000790!1.87e-07!9;CL:0000542!3.81e-07!13;CL:0000051!3.81e-07!13;CL:0000838!5.41e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,3.20e-13,9;CL:0000789,3.20e-13,9;CL:0002420,3.20e-13,9;CL:0002419,3.20e-13,9;CL:0000790,3.20e-13,9;CL:0000084,8.62e-11,11;CL:0000827,8.62e-11,11;CL:0000624,5.76e-10,8;CL:0000838,7.06e-10,12;CL:0000542,4.19e-09,13;CL:0000051,4.19e-09,13;CL:0002320,9.06e-09,46;CL:0000134,9.06e-09,46;CL:0000723,5.64e-08,91;CL:0000048,5.64e-08,91;CL:0000034,2.43e-07,97;CL:0000219,2.99e-07,54;CL:0000738,6.49e-07,17;CL:0002087,6.49e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.67e-15,3;DOID:4045,2.67e-15,3;DOID:0050686,6.78e-08,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.06e-09,46|phase1_expression=0.640595388419176,0,0,0.60492842261366,0,0.16787927191189,0,6.19791952519566,0.84473233291,0.468129052643987,0.68487187290202,0.239316476986009,8.21763503669787,3.93391810885488,0,0,0,0.473193248037357,0.274228867211478,0.42438965179803,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.332469290716985,0.408338712524738,6.69650609179052,7.0320181007142,3.66466620781659,39.999741186109,12.9778642142105,3.39857247121808,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0.503347818173209,3.62681071005672,1.68046899571232,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,3.76823835312181,3.44169550792555,2.719885334831,0.539703191637817,0,0.448026887097336,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,0.22836775943812,0.258937883647172,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,0,0.718890747035522,3.59941638596045,0.889491589511453,0,0,0,0,0,0,0.324482526135515,0.712875546952214,0,0.252722758433675,0,0.650602214813519,0.459804208866946,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.646703978798527,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,0.348252166522167,0.411564272815887,0.398068533636986,0,1.54408744268829,0.284163499395593,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0.379335801906163,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0.509235257325564,0.234690248288502,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0.819674726883377,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0,0,0,0,0.849892149969277,0.419854356970974,0.967399816630967,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.563047426353546,0.36630324853453,0.857473516316263,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0.726511433089237,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0.377252682772152,0,0.128050304809739,0.229741875822453,0,0,0.38581844092741,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.57386499620653,0,0|short_description=p@chr12:81216118..81216165,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:81216118..81216165,+ | |||
|id=chr12:81216118..81216165,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.87e-07!9;CL:0000789!1.87e-07!9;CL:0002420!1.87e-07!9;CL:0002419!1.87e-07!9;CL:0000790!1.87e-07!9;CL:0000542!3.81e-07!13;CL:0000051!3.81e-07!13;CL:0000838!5.41e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.20e-13,9;CL:0000789,3.20e-13,9;CL:0002420,3.20e-13,9;CL:0002419,3.20e-13,9;CL:0000790,3.20e-13,9;CL:0000084,8.62e-11,11;CL:0000827,8.62e-11,11;CL:0000624,5.76e-10,8;CL:0000838,7.06e-10,12;CL:0000542,4.19e-09,13;CL:0000051,4.19e-09,13;CL:0002320,9.06e-09,46;CL:0000134,9.06e-09,46;CL:0000723,5.64e-08,91;CL:0000048,5.64e-08,91;CL:0000034,2.43e-07,97;CL:0000219,2.99e-07,54;CL:0000738,6.49e-07,17;CL:0002087,6.49e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.67e-15,3;DOID:4045,2.67e-15,3;DOID:0050686,6.78e-08,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.06e-09,46 | |||
|phase1_expression=0.640595388419176,0,0,0.60492842261366,0,0.16787927191189,0,6.19791952519566,0.84473233291,0.468129052643987,0.68487187290202,0.239316476986009,8.21763503669787,3.93391810885488,0,0,0,0.473193248037357,0.274228867211478,0.42438965179803,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.332469290716985,0.408338712524738,6.69650609179052,7.0320181007142,3.66466620781659,39.999741186109,12.9778642142105,3.39857247121808,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0.503347818173209,3.62681071005672,1.68046899571232,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,3.76823835312181,3.44169550792555,2.719885334831,0.539703191637817,0,0.448026887097336,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,0.22836775943812,0.258937883647172,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,0,0.718890747035522,3.59941638596045,0.889491589511453,0,0,0,0,0,0,0.324482526135515,0.712875546952214,0,0.252722758433675,0,0.650602214813519,0.459804208866946,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.646703978798527,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,0.348252166522167,0.411564272815887,0.398068533636986,0,1.54408744268829,0.284163499395593,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0.379335801906163,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0.509235257325564,0.234690248288502,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0.819674726883377,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0,0,0,0,0.849892149969277,0.419854356970974,0.967399816630967,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.563047426353546,0.36630324853453,0.857473516316263,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0.726511433089237,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0.377252682772152,0,0.128050304809739,0.229741875822453,0,0,0.38581844092741,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.57386499620653,0,0 | |||
|short_description=p@chr12:81216118..81216165,+ | |||
}} |
Revision as of 23:21, 12 September 2013
Short description: | p@chr12:81216118..81216165, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:81216118..81216165, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.20e-13 | 9 |
alpha-beta T cell | 3.20e-13 | 9 |
immature T cell | 3.20e-13 | 9 |
mature T cell | 3.20e-13 | 9 |
immature alpha-beta T cell | 3.20e-13 | 9 |
T cell | 8.62e-11 | 11 |
pro-T cell | 8.62e-11 | 11 |
CD4-positive, alpha-beta T cell | 5.76e-10 | 8 |
lymphoid lineage restricted progenitor cell | 7.06e-10 | 12 |
lymphocyte | 4.19e-09 | 13 |
common lymphoid progenitor | 4.19e-09 | 13 |
connective tissue cell | 9.06e-09 | 46 |
mesenchymal cell | 9.06e-09 | 46 |
somatic stem cell | 5.64e-08 | 91 |
multi fate stem cell | 5.64e-08 | 91 |
stem cell | 2.43e-07 | 97 |
motile cell | 2.99e-07 | 54 |
leukocyte | 6.49e-07 | 17 |
nongranular leukocyte | 6.49e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.06e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.67e-15 | 3 |
muscle cancer | 2.67e-15 | 3 |
organ system cancer | 6.78e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.