FFCP PHASE1:Hg19::chr3:182983094..182983115,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84002|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15684|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000477699,ENST00000488301_5end|description=CAGE_peak_18_at_B3GNT5_5end|id=chr3:182983094..182983115,+|ontology_enrichment_celltype=CL:0002057!1.49e-12!42;CL:0000860!3.88e-11!45;CL:0000766!2.03e-09!76;CL:0000839!1.79e-08!70;CL:0000557!2.38e-08!71;CL:0002009!1.28e-07!65;CL:0002194!2.51e-07!63;CL:0000576!2.51e-07!63;CL:0000040!2.51e-07!63;CL:0000559!2.51e-07!63|ontology_enrichment_celltype_v019=CL:0000860;7.19e-12;33!CL:0002057;7.19e-12;33!CL:0002393;2.99e-10;6!CL:0002397;2.99e-10;6!CL:0000576;4.11e-09;48!CL:0000226;6.20e-09;3!CL:0000842;6.20e-09;3!CL:0000473;1.49e-08;39!CL:0000234;1.49e-08;39!CL:0000766;9.15e-08;69!CL:0000228;1.14e-07;1!CL:0002372;1.14e-07;1!CL:0000037;2.57e-07;1!CL:0001024;2.57e-07;1|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-18,42;CL:0002057,1.12e-18,42;CL:0000473,4.69e-16,48;CL:0000234,4.69e-16,48;CL:0002194,2.20e-12,59;CL:0000576,2.20e-12,59;CL:0000040,2.20e-12,59;CL:0000559,2.20e-12,59;CL:0002009,6.55e-12,61;CL:0000766,1.56e-11,72;CL:0000839,7.51e-11,66;CL:0000557,1.17e-10,67;CL:0000226,3.38e-09,3;CL:0000842,3.38e-09,3;CL:0000228,1.03e-07,1;CL:0002372,1.03e-07,1;CL:0002087,1.53e-07,115;CL:0001024,2.21e-07,1;CL:0000738,5.60e-07,136;CL:0002393,5.69e-07,9;CL:0002397,5.69e-07,9;CL:0000763,6.62e-07,108;CL:0000049,6.62e-07,108|ontology_enrichment_development_v019=CL:0002057;8.85e-12;42!UBERON:0008947;2.84e-07;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!2.99e-07!86;UBERON:0002371!4.09e-07!80;UBERON:0001017!5.63e-07!82;UBERON:0000922!5.77e-07!612|ontology_enrichment_uberon_v019=UBERON:0003127;1.60e-13;2!UBERON:0002171;1.14e-07;1!UBERON:0006518;1.14e-07;1!UBERON:0008949;1.14e-07;1!UBERON:0000101;1.14e-07;1!UBERON:0002167;1.14e-07;1!UBERON:0001301;2.57e-07;1!UBERON:0004913;2.57e-07;1!UBERON:0003703;2.57e-07;1!UBERON:0001174;2.57e-07;1!UBERON:0004914;2.57e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.04e-13,2;UBERON:0002371,7.59e-11,76;UBERON:0002390,7.91e-11,98;UBERON:0003061,7.91e-11,98;UBERON:0001474,7.02e-10,82;UBERON:0002193,1.47e-09,108;UBERON:0004765,8.61e-09,90;UBERON:0002405,1.97e-08,93;UBERON:0001434,1.12e-07,100;UBERON:0002171,1.18e-07,1;UBERON:0006518,1.18e-07,1;UBERON:0008949,1.18e-07,1;UBERON:0000101,1.18e-07,1;UBERON:0002167,1.18e-07,1;UBERON:0001301,1.51e-07,1;UBERON:0004913,4.90e-07,1;UBERON:0003703,4.90e-07,1;UBERON:0001174,4.90e-07,1;UBERON:0004914,4.90e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0.369754010166788,0,0,1.46800219667424,3.87796785972314,5.01361118675354,4.12320654360118,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,2.06847408441971,1.93645405075148,1.35426486594342,0.188242339542605,0.272906150057846,0,1.22433556948361,2.24650318953266,1.27867425159808,0.329851300186716,0,0.852449501065388,0.870627715885752,0,1.24564449799115,0.502497330513487,0.521482918420201,0.434377689410233,0,1.47311054395026,1.26584954976354,0,0.212604299965044,0.209658645508376,0,0.300353785683013,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.221729397462564,0.263504357079378,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.833296006426766,0,0,0,0.579652024875384,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0.283550194484773,0,0,0,0,0,0.414656231081544,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0.205476322550383,0.358121926479791,0,0.591092280605782,0,0.256686072559497,0,0,0,0.167516265334349,1.27587750330633,0,0,0.828831026872071,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.343143423810856,0,1.94142780736755,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.184161977871793,0,0,0,0,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.551346289938122,0.2148404897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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000477699,ENST00000488301_5end | |||
|description=CAGE_peak_18_at_B3GNT5_5end | |||
|id=chr3:182983094..182983115,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.49e-12!42;CL:0000860!3.88e-11!45;CL:0000766!2.03e-09!76;CL:0000839!1.79e-08!70;CL:0000557!2.38e-08!71;CL:0002009!1.28e-07!65;CL:0002194!2.51e-07!63;CL:0000576!2.51e-07!63;CL:0000040!2.51e-07!63;CL:0000559!2.51e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.19e-12;33!CL:0002057;7.19e-12;33!CL:0002393;2.99e-10;6!CL:0002397;2.99e-10;6!CL:0000576;4.11e-09;48!CL:0000226;6.20e-09;3!CL:0000842;6.20e-09;3!CL:0000473;1.49e-08;39!CL:0000234;1.49e-08;39!CL:0000766;9.15e-08;69!CL:0000228;1.14e-07;1!CL:0002372;1.14e-07;1!CL:0000037;2.57e-07;1!CL:0001024;2.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-18,42;CL:0002057,1.12e-18,42;CL:0000473,4.69e-16,48;CL:0000234,4.69e-16,48;CL:0002194,2.20e-12,59;CL:0000576,2.20e-12,59;CL:0000040,2.20e-12,59;CL:0000559,2.20e-12,59;CL:0002009,6.55e-12,61;CL:0000766,1.56e-11,72;CL:0000839,7.51e-11,66;CL:0000557,1.17e-10,67;CL:0000226,3.38e-09,3;CL:0000842,3.38e-09,3;CL:0000228,1.03e-07,1;CL:0002372,1.03e-07,1;CL:0002087,1.53e-07,115;CL:0001024,2.21e-07,1;CL:0000738,5.60e-07,136;CL:0002393,5.69e-07,9;CL:0002397,5.69e-07,9;CL:0000763,6.62e-07,108;CL:0000049,6.62e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;8.85e-12;42!UBERON:0008947;2.84e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.99e-07!86;UBERON:0002371!4.09e-07!80;UBERON:0001017!5.63e-07!82;UBERON:0000922!5.77e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.60e-13;2!UBERON:0002171;1.14e-07;1!UBERON:0006518;1.14e-07;1!UBERON:0008949;1.14e-07;1!UBERON:0000101;1.14e-07;1!UBERON:0002167;1.14e-07;1!UBERON:0001301;2.57e-07;1!UBERON:0004913;2.57e-07;1!UBERON:0003703;2.57e-07;1!UBERON:0001174;2.57e-07;1!UBERON:0004914;2.57e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.04e-13,2;UBERON:0002371,7.59e-11,76;UBERON:0002390,7.91e-11,98;UBERON:0003061,7.91e-11,98;UBERON:0001474,7.02e-10,82;UBERON:0002193,1.47e-09,108;UBERON:0004765,8.61e-09,90;UBERON:0002405,1.97e-08,93;UBERON:0001434,1.12e-07,100;UBERON:0002171,1.18e-07,1;UBERON:0006518,1.18e-07,1;UBERON:0008949,1.18e-07,1;UBERON:0000101,1.18e-07,1;UBERON:0002167,1.18e-07,1;UBERON:0001301,1.51e-07,1;UBERON:0004913,4.90e-07,1;UBERON:0003703,4.90e-07,1;UBERON:0001174,4.90e-07,1;UBERON:0004914,4.90e-07,1 | |||
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| |||
|short_description=p18@B3GNT5 | |||
}} |
Revision as of 22:58, 12 September 2013
Short description: | p18@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_B3GNT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000477699, ENST00000488301_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.12e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-18 | 42 |
defensive cell | 4.69e-16 | 48 |
phagocyte | 4.69e-16 | 48 |
monopoietic cell | 2.20e-12 | 59 |
monocyte | 2.20e-12 | 59 |
monoblast | 2.20e-12 | 59 |
promonocyte | 2.20e-12 | 59 |
macrophage dendritic cell progenitor | 6.55e-12 | 61 |
myeloid leukocyte | 1.56e-11 | 72 |
myeloid lineage restricted progenitor cell | 7.51e-11 | 66 |
granulocyte monocyte progenitor cell | 1.17e-10 | 67 |
single nucleate cell | 3.38e-09 | 3 |
mononuclear cell | 3.38e-09 | 3 |
multinucleate cell | 1.03e-07 | 1 |
myotube | 1.03e-07 | 1 |
nongranular leukocyte | 1.53e-07 | 115 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.21e-07 | 1 |
leukocyte | 5.60e-07 | 136 |
intermediate monocyte | 5.69e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.69e-07 | 9 |
myeloid cell | 6.62e-07 | 108 |
common myeloid progenitor | 6.62e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.04e-13 | 2 |
bone marrow | 7.59e-11 | 76 |
hematopoietic system | 7.91e-11 | 98 |
blood island | 7.91e-11 | 98 |
bone element | 7.02e-10 | 82 |
hemolymphoid system | 1.47e-09 | 108 |
skeletal element | 8.61e-09 | 90 |
immune system | 1.97e-08 | 93 |
skeletal system | 1.12e-07 | 100 |
lower lobe of right lung | 1.18e-07 | 1 |
right lung lobe | 1.18e-07 | 1 |
lower lobe of lung | 1.18e-07 | 1 |
lobe of lung | 1.18e-07 | 1 |
right lung | 1.18e-07 | 1 |
epididymis | 1.51e-07 | 1 |
hepatopancreatic ampulla | 4.90e-07 | 1 |
extrahepatic bile duct | 4.90e-07 | 1 |
common bile duct | 4.90e-07 | 1 |
duodenal papilla | 4.90e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.