FFCP PHASE1:Hg19::chr3:182970940..182970975,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84002|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15684|TSSclassifier=S|UniProt=Q9BYG0|association_with_transcript=-56bp_to_ENST00000326505,NM_032047,uc003flk.2_5end|coexpression_cluster_id=C2|description=CAGE_peak_4_at_B3GNT5_5end|id=chr3:182970940..182970975,+|ontology_enrichment_celltype=CL:0000766!2.08e-14!76;CL:0000066!5.51e-14!254;CL:0002057!1.23e-13!42;CL:0000860!7.27e-13!45;CL:0000557!3.96e-12!71;CL:0000763!1.51e-11!112;CL:0000049!1.51e-11!112;CL:0002009!1.78e-11!65;CL:0000839!1.30e-10!70;CL:0002194!1.77e-10!63;CL:0000576!1.77e-10!63;CL:0000040!1.77e-10!63;CL:0000559!1.77e-10!63;CL:0002076!6.47e-09!43|ontology_enrichment_celltype_v019=CL:0000860;2.29e-21;33!CL:0002057;2.29e-21;33!CL:0000473;4.64e-16;39!CL:0000234;4.64e-16;39!CL:0002076;6.60e-09;42!CL:0000576;1.96e-08;48!CL:0000766;2.45e-07;69|ontology_enrichment_celltype_v019_2=CL:0000766,2.20e-17,72;CL:0000860,9.09e-17,42;CL:0002057,9.09e-17,42;CL:0000473,1.69e-15,48;CL:0000234,1.69e-15,48;CL:0000557,5.47e-15,67;CL:0000763,5.12e-14,108;CL:0000049,5.12e-14,108;CL:0002009,6.51e-14,61;CL:0000839,3.15e-13,66;CL:0002194,1.30e-12,59;CL:0000576,1.30e-12,59;CL:0000040,1.30e-12,59;CL:0000559,1.30e-12,59;CL:0002076,8.54e-12,42;CL:0000066,1.32e-11,253;CL:0000223,3.99e-08,58|ontology_enrichment_development_v019=CL:0002057;5.90e-13;42|ontology_enrichment_disease=DOID:1749!5.60e-07!14|ontology_enrichment_disease_v019=DOID:1749;6.91e-08;14|ontology_enrichment_disease_v019_2=DOID:1749,4.29e-08,14|ontology_enrichment_uberon=UBERON:0004119!1.56e-09!169;UBERON:0000925!1.56e-09!169;UBERON:0006595!1.56e-09!169;UBERON:0002371!3.52e-09!80;UBERON:0000922!3.54e-08!612;UBERON:0002050!5.27e-08!605;UBERON:0005423!5.27e-08!605;UBERON:0000923!8.24e-08!604;UBERON:0005291!8.24e-08!604;UBERON:0006598!8.24e-08!604;UBERON:0002532!8.24e-08!604;UBERON:0002193!1.69e-07!112;UBERON:0001474!2.82e-07!86;UBERON:0000062!3.19e-07!511;UBERON:0001007!3.82e-07!155;UBERON:0001555!3.82e-07!155;UBERON:0007026!3.82e-07!155;UBERON:0000467!5.42e-07!625;UBERON:0000480!8.02e-07!626|ontology_enrichment_uberon_v019=UBERON:0000165;2.08e-07;28|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.24e-11,76;UBERON:0004765,2.51e-09,90;UBERON:0001474,2.96e-09,82;UBERON:0002405,3.82e-09,93;UBERON:0004119,4.99e-09,160;UBERON:0000925,4.99e-09,160;UBERON:0006595,4.99e-09,160;UBERON:0001434,1.84e-08,100;UBERON:0002193,4.16e-07,108;UBERON:0002390,8.07e-07,98;UBERON:0003061,8.07e-07,98;UBERON:0000922,8.44e-07,592;UBERON:0000165,8.68e-07,29;UBERON:0000930,8.68e-07,29|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0,0,1.47440361900905,2.79120467188971,2.83973783769224,4.74780560811216,1.23766352960047,0,0,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0,0.85870796139317,2.46373965131192,1.25542639594803,0,0,0,0.393364276848904,1.15148819429164,1.39334510984468,1.83884244895785,2.71085326900425,2.58827807116751,0,0,0.587200878669695,1.66198622559563,1.00272223735071,0.217010870715852,0.223915474239924,0,0.515151135268373,3.19876125315042,6.04601509902095,5.57943340731977,4.18372266430232,6.98985409637104,11.1494293522237,11.2200033005639,12.808035326455,12.533558184095,6.89491361473237,7.74581620300591,2.70852973188684,4.51781614902251,6.5497476013883,4.04502272001152,6.42776173978895,6.73950956859797,4.47535988059329,9.89553900560148,14.7603106640008,17.4752147718405,10.1573233520004,15.8867862913519,8.71951148593805,17.587406567972,14.6015217157656,14.5516525952428,3.02699751316684,6.2607198117886,6.32924774881769,0,0.212604299965044,0.209658645508376,0.44931452458598,0.600707571366025,1.28580469357664,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.383587685530591,0,0,0,0,0,0.850813354476611,1.10864698731282,1.14185221401064,0.589405839739707,0.728590576585084,3.33705998505986,1.29818957461873,2.26368658489047,4.12169677608482,0,1.14398982156026,0.371457501329565,0.198762407366705,2.58070378531837,0,0,0.419499436209906,1.6507082516404,0.835979866147242,1.55050055501597,0.71153252537342,1.00416183829401,1.61131726843659,0.760272105718513,3.1728067481262,1.10298924103761,1.62028389576352,0.803697554556718,1.12264686313085,0.900891843866578,0,0,1.09921046358244,19.7670626154095,19.3890132074163,1.74437620857014,0,0.25326102332916,0,0,0,0.560677600142307,0,0.74000264525148,0.311211035399766,1.21239604862719,1.14423332179421,0,0,1.17160715916898,2.49728061464256,0.570471821544449,2.39117888882882,1.87895197830024,2.5899671098901,2.52811452064047,1.02077085627447,2.94802361548243,1.13658359293342,0,0,1.82032272387605,0,3.19838616512726,3.62843707628696,1.6623846929051,0,0,0,1.02088964844019,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,2.70565194428616,3.81844568827169,4.01526433544605,0.121973706129595,0.2650595366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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |||
|TSSclassifier=S | |||
|UniProt=Q9BYG0 | |||
|association_with_transcript=-56bp_to_ENST00000326505,NM_032047,uc003flk.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_B3GNT5_5end | |||
|id=chr3:182970940..182970975,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.08e-14!76;CL:0000066!5.51e-14!254;CL:0002057!1.23e-13!42;CL:0000860!7.27e-13!45;CL:0000557!3.96e-12!71;CL:0000763!1.51e-11!112;CL:0000049!1.51e-11!112;CL:0002009!1.78e-11!65;CL:0000839!1.30e-10!70;CL:0002194!1.77e-10!63;CL:0000576!1.77e-10!63;CL:0000040!1.77e-10!63;CL:0000559!1.77e-10!63;CL:0002076!6.47e-09!43 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.29e-21;33!CL:0002057;2.29e-21;33!CL:0000473;4.64e-16;39!CL:0000234;4.64e-16;39!CL:0002076;6.60e-09;42!CL:0000576;1.96e-08;48!CL:0000766;2.45e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.20e-17,72;CL:0000860,9.09e-17,42;CL:0002057,9.09e-17,42;CL:0000473,1.69e-15,48;CL:0000234,1.69e-15,48;CL:0000557,5.47e-15,67;CL:0000763,5.12e-14,108;CL:0000049,5.12e-14,108;CL:0002009,6.51e-14,61;CL:0000839,3.15e-13,66;CL:0002194,1.30e-12,59;CL:0000576,1.30e-12,59;CL:0000040,1.30e-12,59;CL:0000559,1.30e-12,59;CL:0002076,8.54e-12,42;CL:0000066,1.32e-11,253;CL:0000223,3.99e-08,58 | |||
|ontology_enrichment_development_v019=CL:0002057;5.90e-13;42 | |||
|ontology_enrichment_disease=DOID:1749!5.60e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.91e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.29e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.56e-09!169;UBERON:0000925!1.56e-09!169;UBERON:0006595!1.56e-09!169;UBERON:0002371!3.52e-09!80;UBERON:0000922!3.54e-08!612;UBERON:0002050!5.27e-08!605;UBERON:0005423!5.27e-08!605;UBERON:0000923!8.24e-08!604;UBERON:0005291!8.24e-08!604;UBERON:0006598!8.24e-08!604;UBERON:0002532!8.24e-08!604;UBERON:0002193!1.69e-07!112;UBERON:0001474!2.82e-07!86;UBERON:0000062!3.19e-07!511;UBERON:0001007!3.82e-07!155;UBERON:0001555!3.82e-07!155;UBERON:0007026!3.82e-07!155;UBERON:0000467!5.42e-07!625;UBERON:0000480!8.02e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;2.08e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.24e-11,76;UBERON:0004765,2.51e-09,90;UBERON:0001474,2.96e-09,82;UBERON:0002405,3.82e-09,93;UBERON:0004119,4.99e-09,160;UBERON:0000925,4.99e-09,160;UBERON:0006595,4.99e-09,160;UBERON:0001434,1.84e-08,100;UBERON:0002193,4.16e-07,108;UBERON:0002390,8.07e-07,98;UBERON:0003061,8.07e-07,98;UBERON:0000922,8.44e-07,592;UBERON:0000165,8.68e-07,29;UBERON:0000930,8.68e-07,29 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0,0,1.47440361900905,2.79120467188971,2.83973783769224,4.74780560811216,1.23766352960047,0,0,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0,0.85870796139317,2.46373965131192,1.25542639594803,0,0,0,0.393364276848904,1.15148819429164,1.39334510984468,1.83884244895785,2.71085326900425,2.58827807116751,0,0,0.587200878669695,1.66198622559563,1.00272223735071,0.217010870715852,0.223915474239924,0,0.515151135268373,3.19876125315042,6.04601509902095,5.57943340731977,4.18372266430232,6.98985409637104,11.1494293522237,11.2200033005639,12.808035326455,12.533558184095,6.89491361473237,7.74581620300591,2.70852973188684,4.51781614902251,6.5497476013883,4.04502272001152,6.42776173978895,6.73950956859797,4.47535988059329,9.89553900560148,14.7603106640008,17.4752147718405,10.1573233520004,15.8867862913519,8.71951148593805,17.587406567972,14.6015217157656,14.5516525952428,3.02699751316684,6.2607198117886,6.32924774881769,0,0.212604299965044,0.209658645508376,0.44931452458598,0.600707571366025,1.28580469357664,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.383587685530591,0,0,0,0,0,0.850813354476611,1.10864698731282,1.14185221401064,0.589405839739707,0.728590576585084,3.33705998505986,1.29818957461873,2.26368658489047,4.12169677608482,0,1.14398982156026,0.371457501329565,0.198762407366705,2.58070378531837,0,0,0.419499436209906,1.6507082516404,0.835979866147242,1.55050055501597,0.71153252537342,1.00416183829401,1.61131726843659,0.760272105718513,3.1728067481262,1.10298924103761,1.62028389576352,0.803697554556718,1.12264686313085,0.900891843866578,0,0,1.09921046358244,19.7670626154095,19.3890132074163,1.74437620857014,0,0.25326102332916,0,0,0,0.560677600142307,0,0.74000264525148,0.311211035399766,1.21239604862719,1.14423332179421,0,0,1.17160715916898,2.49728061464256,0.570471821544449,2.39117888882882,1.87895197830024,2.5899671098901,2.52811452064047,1.02077085627447,2.94802361548243,1.13658359293342,0,0,1.82032272387605,0,3.19838616512726,3.62843707628696,1.6623846929051,0,0,0,1.02088964844019,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,2.70565194428616,3.81844568827169,4.01526433544605,0.121973706129595,0.265059536642971,0.464775771478074,0.518305275076852,0.252320850875628,1.09493207722749,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,1.47586126251736,2.74508496477641,4.60951198716227,0,6.8359701239909,5.18495292887766,0.977424915930974,0,1.44331342025273,1.507095264676,0.117408694235822,1.44366447761074,0.925971025153221,2.66355813128438,0,0,0.984868024349589,1.8720341211139,1.18904929830983,3.74935335947108,2.51973192298289,2.55195175036296,4.03013352162817,3.48760726216754,1.53353071666084,2.46331618947972,1.49682337822484,2.48793738648926,1.44119953416961,1.76739406796932,0.063497894292169,0,0,0,0.205654985406647,0,0.571652865261156,0.560655421726804,0,1.10007428731425,0.129271715757778,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0.710783897485092,0.791951872933429,0.602878754119172,1.74306691720059,0.99972991182057,0,0,2.10833939483032,0,0,0,0.434343920002738,0,0.716243852959582,0,0,0,0,0,0,0,0.335032530668698,0,14.2311334549965,5.9832291840805,10.7748033493369,0.36807447515742,0.500170521059677,0.542530047399471,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0.587403472388222,0,0,0.862856803274467,0.426910231213777,2.42502057157008,4.99306318531491,1.20956117331872,0,0,0,0,0,0,0,0.154209693802656,0,0.328508624055237,1.55776328755086,0.116210378459959,0.966875596732978,3.00759705454927,6.26150724764095,0,0,0,1.35359883872224,1.61732207919271,1.56869953835371,2.92278449306521,2.00548094896464,0,2.72149928442425,2.15915916102139,0,1.35473218771926,1.00337954770971,1.27438136522519,1.66215201785745,2.46262230194396,0,0,0.769350375349168,0,0,1.03041011647722,0,0,2.87132768998086,1.30012049207304,0,0.386682873168488,1.84858340537573,1.99554777143968,1.37836572484531,1.82614416276065,1.16013355131383,1.96021243057032,0.178064071293475,2.64455864577565,5.95789208831829,2.93509238737543,8.19378024929954,0,0,0,0.308033580176089,0,0,0,0.143124886741991,1.116475108079,0,0.953150969619124,0,0,0,0.78494864019923,0.719489830333259,0,1.06031162111118,0,1.58510321173008,0,1.46290121726877,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,1.73632660280006,2.62357900818653,0.405820753925408,0.6196469961995,0,0.717056761020258,0.294747123039363,0,0,0,0,0.75894634753143,1.04980416073495,2.59799704358883,3.35151137767894,0,1.03558180854457,1.72202149068492,1.68471475667626,3.54744122829341,5.51336160496703,0.507447609232169,1.52927441428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| |||
|short_description=p4@B3GNT5 | |||
}} |
Revision as of 22:57, 12 September 2013
Short description: | p4@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_B3GNT5_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -56bp_to_ENST00000326505, NM_032047, uc003flk.2_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | Q9BYG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.20e-17 | 72 |
classical monocyte | 9.09e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.09e-17 | 42 |
defensive cell | 1.69e-15 | 48 |
phagocyte | 1.69e-15 | 48 |
granulocyte monocyte progenitor cell | 5.47e-15 | 67 |
myeloid cell | 5.12e-14 | 108 |
common myeloid progenitor | 5.12e-14 | 108 |
macrophage dendritic cell progenitor | 6.51e-14 | 61 |
myeloid lineage restricted progenitor cell | 3.15e-13 | 66 |
monopoietic cell | 1.30e-12 | 59 |
monocyte | 1.30e-12 | 59 |
monoblast | 1.30e-12 | 59 |
promonocyte | 1.30e-12 | 59 |
endo-epithelial cell | 8.54e-12 | 42 |
epithelial cell | 1.32e-11 | 253 |
endodermal cell | 3.99e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.24e-11 | 76 |
skeletal element | 2.51e-09 | 90 |
bone element | 2.96e-09 | 82 |
immune system | 3.82e-09 | 93 |
endoderm-derived structure | 4.99e-09 | 160 |
endoderm | 4.99e-09 | 160 |
presumptive endoderm | 4.99e-09 | 160 |
skeletal system | 1.84e-08 | 100 |
hemolymphoid system | 4.16e-07 | 108 |
hematopoietic system | 8.07e-07 | 98 |
blood island | 8.07e-07 | 98 |
embryo | 8.44e-07 | 592 |
mouth | 8.68e-07 | 29 |
stomodeum | 8.68e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.29e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.