FFCP PHASE1:Mm9::chr12:39506873..39506913,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14009|HGNC=|MCL_coexpression_id=2783|UniProt=E0CXX3|association_with_transcript=0bp_to_ENSMUST00000161164_5end|description=CAGE_peak_1_at_Etv1_5end|id=chr12:39506873..39506913,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.24e-17!102;UBERON:0000924!6.24e-17!102;UBERON:0006601!6.24e-17!102;UBERON:0002346!2.46e-16!71;UBERON:0003075!2.46e-16!71;UBERON:0007284!2.46e-16!71;UBERON:0000033!2.37e-15!63;UBERON:0001017!3.90e-14!73;UBERON:0005743!3.90e-14!73;UBERON:0000073!1.11e-13!75;UBERON:0001016!1.11e-13!75;UBERON:0003056!3.29e-12!49;UBERON:0000955!8.61e-12!50;UBERON:0006238!8.61e-12!50;UBERON:0002616!2.99e-11!49;UBERON:0001049!5.49e-10!52;UBERON:0005068!5.49e-10!52;UBERON:0006241!5.49e-10!52;UBERON:0007135!5.49e-10!52;UBERON:0004111!6.49e-10!122;UBERON:0000468!1.21e-09!333;UBERON:0003080!1.23e-09!40;UBERON:0000025!1.51e-09!114;UBERON:0002780!1.61e-09!39;UBERON:0001890!1.61e-09!39;UBERON:0006240!1.61e-09!39;UBERON:0005157!2.01e-07!27;UBERON:0000922!2.52e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.22e-22,92;UBERON:0004121,1.48e-14,95;UBERON:0000924,1.48e-14,95;UBERON:0006601,1.48e-14,95;UBERON:0001017,3.28e-14,73;UBERON:0002346,3.94e-14,64;UBERON:0003075,3.94e-14,64;UBERON:0007284,3.94e-14,64;UBERON:0001016,9.38e-14,75;UBERON:0010371,2.25e-12,73;UBERON:0003056,2.84e-12,49;UBERON:0000955,4.07e-11,47;UBERON:0006238,4.07e-11,47;UBERON:0002616,1.40e-10,46;UBERON:0000073,1.92e-10,54;UBERON:0001049,4.88e-10,52;UBERON:0005068,4.88e-10,52;UBERON:0006241,4.88e-10,52;UBERON:0007135,4.88e-10,52;UBERON:0004111,9.13e-10,122;UBERON:0003080,1.10e-09,40;UBERON:0002780,1.44e-09,39;UBERON:0001890,1.44e-09,39;UBERON:0006240,1.44e-09,39;UBERON:0000025,2.14e-09,114|phase1_expression=34.4320021275307,0,0,0,0,0.33575854382378,0.934450562382103,0.258246646883153,0,0,0,0,0,0,0.999329285446988,0.202475267389826,0,0.157731082679119,0.411343300817216,0.42438965179803,12.5013636522073,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,7.05022180663233,6.69087746048796,0.917733760808408,3.9119567217402,5.23260375313072,1.97717564461025,1.1665793944457,3.63964696225943,5.75010257459886,0,0,0,8.48956138918625,8.30946975822394,9.28209766099396,5.26022798234954,5.81890077199236,8.23980824558033,4.74382344896785,1.77858959222228,5.39939830368839,5.93319817540185,2.1314403448383,2.09720077362883,4.61061966385865,9.02099627083756,5.13022565660425,5.25812403378455,6.85562362569129,7.50953039235486,12.2490799214954,9.77623804386011,9.19218786610021,9.91042928994498,30.2618991261895,26.2667171868176,7.12185953743047,6.95306091378313,9.89735404057844,15.9134309430787,12.380777420697,19.0997809721013,6.18720029494702,13.0981946335175,7.08317894136142,2.87759534666099,10.8823046553771,6.08715426273523,2.58127163094416,0.679971333707751,0,0.649776417447669,0,6.17955448579708,17.2134625803838,9.87186817490901,8.83348936275851,6.05626705039726,0,0,0,1.73192832808971,2.53359865475099,2.02209778005913,5.1382745873577,5.17875767294343,32.211944177067,10.235634279202,16.7456013071678,20.0635482612771,22.6083960828934,30.5730638552832,29.6573155538034,0.741584903203122,14.6045350489111,2.65383165584962,10.8383789464764,5.96272099843063,6.30337829075789,7.45567044872489,161.322219153362,111.425648024758,3.32094171771169,0.479260498023681,0,0.127070227073065,14.2301107434582,28.3650373747548,19.9790419859454,40.1534179644159,33.4987249102733,42.1809730455907,33.0972176658226,17.1090131268531,9.45492976636707,9.09801930361229,17.2562321826909,23.0313184043986,21.8406999211799,30.9706863265201,25.921228667743,17.5534167810426,17.2953522384547,18.646643187386,15.2634988736019,11.2095356325078,13.4265316919152,19.8824770305262,18.8508329887714,18.0730711996639,23.6811473235073,18.108828003899,12.3401245427466,0.702213187313235,0.51469581422943,0,22.3695834338342,22.2799756982041,24.488440358698,35.2749656021963,33.6466836288061,29.1564843357145,31.1595485965547,26.5590667385623,28.0236821681207,21.228220638839,19.043425833175,19.7807895291888,19.5907983149945,17.344459107993,18.9231050452124,71.078002614675,29.0191006909582,0.330418782983798,2.11560453330835,23.674995809411,34.6032641072053,24.3559501898756,17.7481501668541,16.0112191568307,11.9842144450912,3.79623249235609,8.23494773620054,11.0587491872119,13.3300836267571,10.7230247915516,6.29173586057955,5.18731319699266,4.18196673834171,6.82804443431094,8.11164439529075,5.63538678365402,7.73875045812194,8.72786192254316,8.6968416663995,7.01925562079256,5.16635517928608,3.29697328466887,3.08492909804501,1.48226313543574,3.50374722003798,2.16214894624523,1.57403478669398,1.01430060694251,1.92941727801933,1.78238096246994,2.30156909960649,1.62135226775035,0.274561413188081,4.31304619582064,2.97712758134803,3.74445207737473,1.76805214562978,1.07638448113147,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| ||
|EntrezGene=14009 | |||
|HGNC= | |||
|MCL_coexpression_id=2783 | |||
|UniProt=E0CXX3 | |||
|association_with_transcript=0bp_to_ENSMUST00000161164_5end | |||
|description=CAGE_peak_1_at_Etv1_5end | |||
|id=chr12:39506873..39506913,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.24e-17!102;UBERON:0000924!6.24e-17!102;UBERON:0006601!6.24e-17!102;UBERON:0002346!2.46e-16!71;UBERON:0003075!2.46e-16!71;UBERON:0007284!2.46e-16!71;UBERON:0000033!2.37e-15!63;UBERON:0001017!3.90e-14!73;UBERON:0005743!3.90e-14!73;UBERON:0000073!1.11e-13!75;UBERON:0001016!1.11e-13!75;UBERON:0003056!3.29e-12!49;UBERON:0000955!8.61e-12!50;UBERON:0006238!8.61e-12!50;UBERON:0002616!2.99e-11!49;UBERON:0001049!5.49e-10!52;UBERON:0005068!5.49e-10!52;UBERON:0006241!5.49e-10!52;UBERON:0007135!5.49e-10!52;UBERON:0004111!6.49e-10!122;UBERON:0000468!1.21e-09!333;UBERON:0003080!1.23e-09!40;UBERON:0000025!1.51e-09!114;UBERON:0002780!1.61e-09!39;UBERON:0001890!1.61e-09!39;UBERON:0006240!1.61e-09!39;UBERON:0005157!2.01e-07!27;UBERON:0000922!2.52e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.22e-22,92;UBERON:0004121,1.48e-14,95;UBERON:0000924,1.48e-14,95;UBERON:0006601,1.48e-14,95;UBERON:0001017,3.28e-14,73;UBERON:0002346,3.94e-14,64;UBERON:0003075,3.94e-14,64;UBERON:0007284,3.94e-14,64;UBERON:0001016,9.38e-14,75;UBERON:0010371,2.25e-12,73;UBERON:0003056,2.84e-12,49;UBERON:0000955,4.07e-11,47;UBERON:0006238,4.07e-11,47;UBERON:0002616,1.40e-10,46;UBERON:0000073,1.92e-10,54;UBERON:0001049,4.88e-10,52;UBERON:0005068,4.88e-10,52;UBERON:0006241,4.88e-10,52;UBERON:0007135,4.88e-10,52;UBERON:0004111,9.13e-10,122;UBERON:0003080,1.10e-09,40;UBERON:0002780,1.44e-09,39;UBERON:0001890,1.44e-09,39;UBERON:0006240,1.44e-09,39;UBERON:0000025,2.14e-09,114 | |||
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| |||
|short_description=p1@Etv1 | |||
}} |
Revision as of 22:48, 12 September 2013
Short description: | p1@Etv1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Etv1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2783 |
Association with transcript: | 0bp_to_ENSMUST00000161164_5end |
EntrezGene: | Etv1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.22e-22 | 92 |
ectoderm-derived structure | 1.48e-14 | 95 |
ectoderm | 1.48e-14 | 95 |
presumptive ectoderm | 1.48e-14 | 95 |
central nervous system | 3.28e-14 | 73 |
neurectoderm | 3.94e-14 | 64 |
neural plate | 3.94e-14 | 64 |
presumptive neural plate | 3.94e-14 | 64 |
nervous system | 9.38e-14 | 75 |
ecto-epithelium | 2.25e-12 | 73 |
pre-chordal neural plate | 2.84e-12 | 49 |
brain | 4.07e-11 | 47 |
future brain | 4.07e-11 | 47 |
regional part of brain | 1.40e-10 | 46 |
regional part of nervous system | 1.92e-10 | 54 |
neural tube | 4.88e-10 | 52 |
neural rod | 4.88e-10 | 52 |
future spinal cord | 4.88e-10 | 52 |
neural keel | 4.88e-10 | 52 |
anatomical conduit | 9.13e-10 | 122 |
anterior neural tube | 1.10e-09 | 40 |
regional part of forebrain | 1.44e-09 | 39 |
forebrain | 1.44e-09 | 39 |
future forebrain | 1.44e-09 | 39 |
tube | 2.14e-09 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.