FFCP PHASE1:Hg19::chr3:168865194..168865245,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |||
|TSSclassifier=N | |||
|UniProt=Q03112 | |||
|association_with_transcript=276bp_to_ENST00000464456,NM_001164000,uc003ffk.2_5end | |||
|description=CAGE_peak_3_at_MECOM_5end | |||
|id=chr3:168865194..168865245,- | |||
|ontology_enrichment_celltype=CL:0002139!6.91e-12!24;CL:0000071!1.69e-10!18;CL:0002546!1.69e-10!18;CL:0000222!6.60e-10!119;CL:0000115!5.26e-09!35;CL:0000220!8.83e-09!246;CL:0000359!1.30e-08!32;CL:0002321!1.60e-08!248;CL:0002078!3.01e-07!44;CL:0000192!8.45e-07!42;CL:0000514!8.45e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000071;5.39e-13;18!CL:0002139;7.65e-13;24!CL:0000115;3.73e-09;36!CL:0000359;3.77e-07;32!CL:0002543;6.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,5.76e-13,18;CL:0002546,5.76e-13,18;CL:0002139,7.92e-13,24;CL:0000115,4.90e-11,36;CL:0000222,8.85e-09,121;CL:0002078,1.35e-08,45;CL:0002321,2.14e-07,250;CL:0000359,2.73e-07,32;CL:0002543,5.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.39e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.68e-29!241;UBERON:0000477!8.11e-29!286;UBERON:0004872!1.12e-23!84;UBERON:0003914!5.68e-23!118;UBERON:0001981!2.66e-21!60;UBERON:0007500!2.66e-21!60;UBERON:0004537!2.66e-21!60;UBERON:0006965!2.66e-21!60;UBERON:0000025!2.92e-21!194;UBERON:0002049!3.80e-21!79;UBERON:0007798!3.80e-21!79;UBERON:0000055!1.47e-20!69;UBERON:0001009!4.78e-19!113;UBERON:0000483!8.33e-19!309;UBERON:0000119!3.85e-18!312;UBERON:0004535!5.80e-18!110;UBERON:0000481!1.53e-17!347;UBERON:0001637!2.39e-15!42;UBERON:0003509!2.39e-15!42;UBERON:0004572!2.39e-15!42;UBERON:0000475!2.94e-14!365;UBERON:0000468!1.27e-13!659;UBERON:0003103!3.59e-13!69;UBERON:0000467!1.31e-12!625;UBERON:0000480!2.11e-12!626;UBERON:0004573!9.90e-12!33;UBERON:0004571!9.90e-12!33;UBERON:0000490!1.21e-10!138;UBERON:0007023!1.23e-10!115;UBERON:0003104!1.28e-10!238;UBERON:0009142!1.28e-10!238;UBERON:0001986!1.69e-10!18;UBERON:0004638!1.69e-10!18;UBERON:0004852!1.69e-10!18;UBERON:0007100!3.13e-09!27;UBERON:0000947!5.35e-09!21;UBERON:0010191!5.35e-09!21;UBERON:0002050!9.21e-09!605;UBERON:0005423!9.21e-09!605;UBERON:0000922!9.39e-09!612;UBERON:0000487!1.26e-08!22;UBERON:0000923!1.67e-08!604;UBERON:0005291!1.67e-08!604;UBERON:0006598!1.67e-08!604;UBERON:0002532!1.67e-08!604;UBERON:0000948!3.99e-08!24;UBERON:0005498!3.99e-08!24;UBERON:0004140!3.99e-08!24;UBERON:0009881!3.99e-08!24;UBERON:0004141!3.99e-08!24;UBERON:0003084!3.99e-08!24;UBERON:0007005!3.99e-08!24;UBERON:0004139!3.99e-08!24;UBERON:0004291!3.99e-08!24;UBERON:0002100!1.04e-07!216;UBERON:0005256!1.40e-07!143;UBERON:0006914!3.82e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.39e-13;18!UBERON:0001986;5.39e-13;18!UBERON:0004852;5.39e-13;18!UBERON:0001637;1.49e-12;42!UBERON:0003509;1.49e-12;42!UBERON:0004572;1.49e-12;42!UBERON:0007500;6.53e-12;56!UBERON:0001981;6.53e-12;56!UBERON:0004537;6.53e-12;56!UBERON:0004573;1.46e-10;33!UBERON:0004571;1.46e-10;33!UBERON:0000487;1.53e-10;22!UBERON:0000055;4.26e-10;65!UBERON:0002049;1.08e-09;75!UBERON:0007798;1.08e-09;75!UBERON:0007100;5.86e-09;25!UBERON:0000947;1.54e-08;21!UBERON:0010191;1.54e-08;21!UBERON:0006914;1.63e-08;25!UBERON:0003914;4.17e-08;74!UBERON:0000948;1.40e-07;22!UBERON:0000025;3.98e-07;93!UBERON:0001009;7.16e-07;112!UBERON:0004111;8.93e-07;130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.04e-26,83;UBERON:0003914,2.22e-24,117;UBERON:0007500,1.74e-23,59;UBERON:0001981,1.74e-23,59;UBERON:0004537,1.74e-23,59;UBERON:0006965,1.74e-23,59;UBERON:0000055,4.48e-22,68;UBERON:0002049,7.94e-22,78;UBERON:0007798,7.94e-22,78;UBERON:0001009,5.85e-21,112;UBERON:0004111,3.37e-20,240;UBERON:0004535,1.49e-19,109;UBERON:0000025,2.05e-16,192;UBERON:0001637,2.26e-16,42;UBERON:0003509,2.26e-16,42;UBERON:0004572,2.26e-16,42;UBERON:0003103,1.03e-13,68;UBERON:0004638,5.76e-13,18;UBERON:0001986,5.76e-13,18;UBERON:0004852,5.76e-13,18;UBERON:0004573,1.46e-11,33;UBERON:0004571,1.46e-11,33;UBERON:0000483,1.63e-11,306;UBERON:0000119,4.45e-11,309;UBERON:0000487,1.82e-10,22;UBERON:0007100,4.17e-10,27;UBERON:0000947,1.12e-08,21;UBERON:0010191,1.12e-08,21;UBERON:0000948,1.27e-08,24;UBERON:0005498,1.27e-08,24;UBERON:0004140,1.27e-08,24;UBERON:0009881,1.27e-08,24;UBERON:0004141,1.27e-08,24;UBERON:0003084,1.27e-08,24;UBERON:0007005,1.27e-08,24;UBERON:0004139,1.27e-08,24;UBERON:0004291,1.27e-08,24;UBERON:0006914,1.87e-08,25;UBERON:0000490,1.05e-07,148 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.737201809504527,1.39560233594486,0.436882744260345,0,0.495065411840187,1.65698687863958,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,1.72369481307503,1.83600622119828,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0.560508562981536,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,1.02290049474824,0,0,0,0,0,4.34860158954712,4.21285855178871,2.89854792787316,1.57174890597255,0,0,0,0,0,0,0,0,3.9752481473341,4.30117297553062,2.08284300964557,2.26123176769604,2.93649605346934,2.75118041940067,4.38889429727302,4.65150166504792,6.04802646567407,13.3888245105868,4.02829317109147,1.52054421143703,1.22031028774085,6.25027236587977,0.81014194788176,8.57277391527166,7.4094692966636,6.19363142658272,6.13266549863533,3.79706263827252,2.74802615895611,0,0,0,0,2.91250176828533,2.91300197789081,4.58938593198102,2.4826786753885,1.68203280042692,4.2699598291882,2.22000793575444,2.48968828319813,4.17603083416033,2.94231425604226,0.302714855289863,0,0,0.624320153660641,0.570471821544449,0.298897361103602,0.117434498643765,0,0,1.02077085627447,0.368502951935304,0.929932030581889,1.18800285728205,0,0,0,0.168336113954066,0.375355559615893,1.38532057742091,0.877955241761676,0.30648779579902,0.300476117813194,2.04177929688038,1.25572744982203,0.427114777637135,0.847727604638247,1.80054657650641,3.29768093563004,1.03056216018252,0.18611685633159,1.0126579934476,0.876933046450788,2.27190396819703,0.736399189138395,0.161646056818812,3.19508633264953,2.11579406278045,0.67824236924195,0.773043412653187,0.818238361772504,1.14721838155602,0.121973706129595,0,0.116193942869518,0.725627385107593,0,0,0,1.28648187638577,1.38134921352481,6.96551892047969,2.88751792667834,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0,0.38474715694639,3.69077727312324,0,0,0,0,0,0,0,0.491953754172454,1.02940686179115,0.439001141634502,0,0.301586917234893,0.462942225792648,0,0,2.88662684050547,0.463721619900307,1.99594780200897,0.288732895522148,0.925971025153221,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,0.581267877027924,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0.1466765716419,2.58543431515556,0,0,0,1.04007436911366,1.28603687131071,0,1.3321108950805,0,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0.723906533337896,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0.500170521059677,0.271265023699736,0.623912584592421,0.178428988797162,0.630809660135739,1.7571212248907,0.601892199455438,2.27407504055985,0,0.664225598535437,0.553107505625109,1.99832313276591,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0.925258162815933,0,1.23190734020714,2.07701771673448,0,0.120859449591622,2.6065841139427,1.56537681191024,0.459257792658427,0.546273504020151,0.393373244878272,1.35359883872224,1.84836809050595,0.784349769176855,0,1.68882606228601,1.13733384070897,1.53084334748864,1.51141141271498,1.54227252690289,0.541892875087706,0.501689773854853,0.509752546090077,0,1.56712328305525,0.219259876645935,0,0,0.328014645699706,0,1.33953315142039,0,0,0,0.650060246036521,0,1.06337790121334,0.616194468458578,0.614014698904518,0.137836572484531,0.322260734604821,0,0.0852266274161009,0.445160178233687,1.4875642382488,1.92190067365106,4.59405764980503,1.2138933702666,2.78907329578371,3.1481234683064,1.3940745403212,2.46426864140871,1.59691809095107,3.47973196830029,3.52116016297448,4.57999637574372,0.372158369359667,1.2655176988749,0.38126038784765,0.255897791311334,2.1396949401696,0.636406495851874,0.78494864019923,0,0,0,1.01091240786658,0,1.68503382495592,0,2.19342140668156,2.11300293513511,0.682499557039929,0.282810863907425,3.39024349860728,2.75682671773062,1.99031692572366,3.5076070820301,1.15755106853338,3.9353685122798,1.21746226177622,2.478587984798,1.69017361519345,1.14729081763241,0.687743287091848,1.426684205925,0.709522128141196,0,0,0.379473173765715,0,1.05844323998063,1.34060455107157,0,1.88287601553558,0,0,0.886860307073351,2.52695740227655,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,4.0216127727797,0,0,0,0,0,0,12.358299779517,0,0,0,0,0,0,0,0.390776190804081,1.9488432172667,2.46174797895425,1.6227340708559,0,4.22961015263549,3.36852972734796,5.27429445378818,0,0,0,0,1.18785872333055,0,0,0.844016498463076,1.44701316529778,0,0.211125408127993,1.79323189425963,1.93398740871803,0,0.102268682502155,0,0.311039587661807,3.50486569474575,1.9692329214317,0,4.438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| |||
|short_description=p3@MECOM | |||
}} |
Revision as of 22:37, 12 September 2013
Short description: | p3@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MECOM_5end |
Coexpression cluster: | NA |
Association with transcript: | 276bp_to_ENST00000464456, NM_001164000, uc003ffk.2_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | Q03112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 5.76e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.76e-13 | 18 |
endothelial cell of vascular tree | 7.92e-13 | 24 |
endothelial cell | 4.90e-11 | 36 |
mesodermal cell | 8.85e-09 | 121 |
meso-epithelial cell | 1.35e-08 | 45 |
embryonic cell | 2.14e-07 | 250 |
vascular associated smooth muscle cell | 2.73e-07 | 32 |
vein endothelial cell | 5.34e-07 | 6 |
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