FFCP PHASE1:Hg19::chr3:156807749..156807758,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100498859|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=79bp_to_ENST00000467995,ENST00000471719,ENST00000474477,NR_034008_5end|coexpression_cluster_id=C56|description=CAGE_peak_7_at_LOC100498859_5end|id=chr3:156807749..156807758,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;1.35e-34;4!UBERON:0007284;1.35e-34;4!UBERON:0004140;4.72e-17;1!UBERON:0000358;6.99e-17;1!UBERON:0010227;6.99e-17;1!UBERON:0010226;1.65e-16;1!UBERON:0006603;5.05e-07;65|ontology_enrichment_disease=DOID:114!1.82e-07!2|ontology_enrichment_disease_v019=DOID:114;1.17e-31;2!DOID:178;1.65e-16;1!DOID:326;1.65e-16;1!DOID:3978;1.65e-16;1!DOID:3394;1.65e-16;1!DOID:5844;1.65e-16;1!DOID:1287;2.26e-16;4|ontology_enrichment_disease_v019_2=DOID:114,1.17e-31,2;DOID:178,1.65e-16,1;DOID:326,1.65e-16,1;DOID:3978,1.65e-16,1;DOID:3394,1.65e-16,1;DOID:5844,1.65e-16,1;DOID:1287,2.26e-16,4|ontology_enrichment_uberon=UBERON:0007100!4.34e-14!27;UBERON:0004151!2.16e-10!3;UBERON:0002331!2.43e-10!10;UBERON:0000358!2.43e-10!10;UBERON:0000307!2.43e-10!10;UBERON:0000091!2.43e-10!10;UBERON:0000087!2.43e-10!10;UBERON:0007806!2.43e-10!10;UBERON:0008780!2.43e-10!10;UBERON:0005728!2.43e-10!10;UBERON:0003978!2.75e-10!3;UBERON:0009751!2.75e-10!3;UBERON:0000946!2.75e-10!3;UBERON:0002523!2.75e-10!3;UBERON:0005983!2.75e-10!3;UBERON:0002165!2.75e-10!3;UBERON:0002062!2.75e-10!3;UBERON:0007280!2.75e-10!3;UBERON:0000948!7.11e-09!24;UBERON:0005498!7.11e-09!24;UBERON:0004140!7.11e-09!24;UBERON:0009881!7.11e-09!24;UBERON:0004141!7.11e-09!24;UBERON:0003084!7.11e-09!24;UBERON:0007005!7.11e-09!24;UBERON:0004139!7.11e-09!24;UBERON:0004291!7.11e-09!24;UBERON:0002081!1.76e-07!2;UBERON:0002133!2.18e-07!2|ontology_enrichment_uberon_v019=UBERON:0007100;1.59e-48;25!UBERON:0004151;3.30e-46;3!UBERON:0003978;7.72e-46;3!UBERON:0000946;7.72e-46;3!UBERON:0002081;1.48e-31;2!UBERON:0002133;3.46e-31;2!UBERON:0000948;8.91e-25;22!UBERON:0002079;6.99e-17;1!UBERON:0002084;1.65e-16;1!UBERON:0002135;1.65e-16;1!UBERON:0002146;1.65e-16;1!UBERON:0002134;1.65e-16;1!UBERON:0002082;1.65e-16;1!UBERON:0005208;1.65e-16;1!UBERON:0005623;1.65e-16;1!UBERON:0004145;1.65e-16;1!UBERON:0005946;1.65e-16;1!UBERON:0005965;1.65e-16;1!UBERON:0002078;1.65e-16;1!UBERON:0002331;2.17e-14;10!UBERON:0010313;2.79e-14;10!UBERON:0003103;5.73e-10;61|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.21e-46,3;UBERON:0003978,4.17e-46,3;UBERON:0009751,4.17e-46,3;UBERON:0000946,4.17e-46,3;UBERON:0002523,4.17e-46,3;UBERON:0005983,4.17e-46,3;UBERON:0002165,4.17e-46,3;UBERON:0002062,4.17e-46,3;UBERON:0007280,4.17e-46,3;UBERON:0007100,4.18e-45,27;UBERON:0002081,1.00e-31,2;UBERON:0010227,1.00e-31,2;UBERON:0002133,2.97e-31,2;UBERON:0000948,7.61e-23,24;UBERON:0005498,7.61e-23,24;UBERON:0004140,7.61e-23,24;UBERON:0009881,7.61e-23,24;UBERON:0004141,7.61e-23,24;UBERON:0003084,7.61e-23,24;UBERON:0007005,7.61e-23,24;UBERON:0004139,7.61e-23,24;UBERON:0004291,7.61e-23,24;UBERON:0004797,3.22e-20,7;UBERON:0003103,1.61e-17,68;UBERON:0002079,6.47e-17,1;UBERON:0002084,8.86e-17,1;UBERON:0002082,8.86e-17,1;UBERON:0010226,8.86e-17,1;UBERON:0002146,1.04e-16,1;UBERON:0005623,1.04e-16,1;UBERON:0002134,1.21e-16,1;UBERON:0005208,1.21e-16,1;UBERON:0005946,1.21e-16,1;UBERON:0005965,1.21e-16,1;UBERON:0002078,1.21e-16,1;UBERON:0002135,1.93e-16,1;UBERON:0010313,2.33e-14,10;UBERON:0002342,2.33e-14,10;UBERON:0005062,2.33e-14,10;UBERON:0002331,2.93e-14,10;UBERON:0000358,2.93e-14,10;UBERON:0000307,2.93e-14,10;UBERON:0000091,2.93e-14,10;UBERON:0000087,2.93e-14,10;UBERON:0007010,2.93e-14,10;UBERON:0007806,2.93e-14,10;UBERON:0008780,2.93e-14,10;UBERON:0005728,2.93e-14,10;UBERON:0001009,8.89e-13,112;UBERON:0007023,5.81e-08,114|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0.521482918420201,0.434377689410233,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100498859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=79bp_to_ENST00000467995,ENST00000471719,ENST00000474477,NR_034008_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_7_at_LOC100498859_5end | |||
|id=chr3:156807749..156807758,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.35e-34;4!UBERON:0007284;1.35e-34;4!UBERON:0004140;4.72e-17;1!UBERON:0000358;6.99e-17;1!UBERON:0010227;6.99e-17;1!UBERON:0010226;1.65e-16;1!UBERON:0006603;5.05e-07;65 | |||
|ontology_enrichment_disease=DOID:114!1.82e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.17e-31;2!DOID:178;1.65e-16;1!DOID:326;1.65e-16;1!DOID:3978;1.65e-16;1!DOID:3394;1.65e-16;1!DOID:5844;1.65e-16;1!DOID:1287;2.26e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.17e-31,2;DOID:178,1.65e-16,1;DOID:326,1.65e-16,1;DOID:3978,1.65e-16,1;DOID:3394,1.65e-16,1;DOID:5844,1.65e-16,1;DOID:1287,2.26e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!4.34e-14!27;UBERON:0004151!2.16e-10!3;UBERON:0002331!2.43e-10!10;UBERON:0000358!2.43e-10!10;UBERON:0000307!2.43e-10!10;UBERON:0000091!2.43e-10!10;UBERON:0000087!2.43e-10!10;UBERON:0007806!2.43e-10!10;UBERON:0008780!2.43e-10!10;UBERON:0005728!2.43e-10!10;UBERON:0003978!2.75e-10!3;UBERON:0009751!2.75e-10!3;UBERON:0000946!2.75e-10!3;UBERON:0002523!2.75e-10!3;UBERON:0005983!2.75e-10!3;UBERON:0002165!2.75e-10!3;UBERON:0002062!2.75e-10!3;UBERON:0007280!2.75e-10!3;UBERON:0000948!7.11e-09!24;UBERON:0005498!7.11e-09!24;UBERON:0004140!7.11e-09!24;UBERON:0009881!7.11e-09!24;UBERON:0004141!7.11e-09!24;UBERON:0003084!7.11e-09!24;UBERON:0007005!7.11e-09!24;UBERON:0004139!7.11e-09!24;UBERON:0004291!7.11e-09!24;UBERON:0002081!1.76e-07!2;UBERON:0002133!2.18e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.59e-48;25!UBERON:0004151;3.30e-46;3!UBERON:0003978;7.72e-46;3!UBERON:0000946;7.72e-46;3!UBERON:0002081;1.48e-31;2!UBERON:0002133;3.46e-31;2!UBERON:0000948;8.91e-25;22!UBERON:0002079;6.99e-17;1!UBERON:0002084;1.65e-16;1!UBERON:0002135;1.65e-16;1!UBERON:0002146;1.65e-16;1!UBERON:0002134;1.65e-16;1!UBERON:0002082;1.65e-16;1!UBERON:0005208;1.65e-16;1!UBERON:0005623;1.65e-16;1!UBERON:0004145;1.65e-16;1!UBERON:0005946;1.65e-16;1!UBERON:0005965;1.65e-16;1!UBERON:0002078;1.65e-16;1!UBERON:0002331;2.17e-14;10!UBERON:0010313;2.79e-14;10!UBERON:0003103;5.73e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.21e-46,3;UBERON:0003978,4.17e-46,3;UBERON:0009751,4.17e-46,3;UBERON:0000946,4.17e-46,3;UBERON:0002523,4.17e-46,3;UBERON:0005983,4.17e-46,3;UBERON:0002165,4.17e-46,3;UBERON:0002062,4.17e-46,3;UBERON:0007280,4.17e-46,3;UBERON:0007100,4.18e-45,27;UBERON:0002081,1.00e-31,2;UBERON:0010227,1.00e-31,2;UBERON:0002133,2.97e-31,2;UBERON:0000948,7.61e-23,24;UBERON:0005498,7.61e-23,24;UBERON:0004140,7.61e-23,24;UBERON:0009881,7.61e-23,24;UBERON:0004141,7.61e-23,24;UBERON:0003084,7.61e-23,24;UBERON:0007005,7.61e-23,24;UBERON:0004139,7.61e-23,24;UBERON:0004291,7.61e-23,24;UBERON:0004797,3.22e-20,7;UBERON:0003103,1.61e-17,68;UBERON:0002079,6.47e-17,1;UBERON:0002084,8.86e-17,1;UBERON:0002082,8.86e-17,1;UBERON:0010226,8.86e-17,1;UBERON:0002146,1.04e-16,1;UBERON:0005623,1.04e-16,1;UBERON:0002134,1.21e-16,1;UBERON:0005208,1.21e-16,1;UBERON:0005946,1.21e-16,1;UBERON:0005965,1.21e-16,1;UBERON:0002078,1.21e-16,1;UBERON:0002135,1.93e-16,1;UBERON:0010313,2.33e-14,10;UBERON:0002342,2.33e-14,10;UBERON:0005062,2.33e-14,10;UBERON:0002331,2.93e-14,10;UBERON:0000358,2.93e-14,10;UBERON:0000307,2.93e-14,10;UBERON:0000091,2.93e-14,10;UBERON:0000087,2.93e-14,10;UBERON:0007010,2.93e-14,10;UBERON:0007806,2.93e-14,10;UBERON:0008780,2.93e-14,10;UBERON:0005728,2.93e-14,10;UBERON:0001009,8.89e-13,112;UBERON:0007023,5.81e-08,114 | |||
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|short_description=p7@LOC100498859 | |||
}} |
Revision as of 22:21, 12 September 2013
Short description: | p7@LOC100498859 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LOC100498859_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 79bp_to_ENST00000467995, ENST00000471719, ENST00000474477, NR_034008_5end |
EntrezGene: | LOC100498859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.17e-31 | 2 |
vascular disease | 1.65e-16 | 1 |
ischemia | 1.65e-16 | 1 |
extrinsic cardiomyopathy | 1.65e-16 | 1 |
myocardial ischemia | 1.65e-16 | 1 |
myocardial infarction | 1.65e-16 | 1 |
cardiovascular system disease | 2.26e-16 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.