FFCP PHASE1:Hg19::chr3:154834468..154834481,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1514|description=CAGE_peak_at_chr3:154834468..154834481,+|id=chr3:154834468..154834481,+|ontology_enrichment_celltype=CL:0000055!7.06e-14!180;CL:0000057!4.55e-13!75;CL:0002620!7.51e-09!23;CL:0000048!4.83e-08!430;CL:0000723!1.64e-07!436;CL:0000034!7.72e-07!444|ontology_enrichment_celltype_v019=CL:0000775;1.16e-14;3!CL:0002561;1.52e-10;2!CL:0002617;2.66e-10;2!CL:0002588;4.72e-10;2!CL:0000723;1.24e-09;61!CL:0000134;3.23e-08;55!CL:0000135;1.93e-07;3!CL:0000388;1.93e-07;3!CL:0000034;3.90e-07;69!CL:0002541;4.10e-07;3!CL:0000048;6.92e-07;58!CL:0002573;9.61e-07;2!CL:0000594;9.61e-07;3|ontology_enrichment_celltype_v019_2=CL:0000775,1.14e-14,3;CL:0002561,1.46e-10,2;CL:0002617,1.93e-10,2;CL:0002588,2.67e-10,2;CL:0000135,2.06e-07,3;CL:0000388,2.06e-07,3;CL:0002541,4.43e-07,3;CL:0000594,8.82e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!4.16e-08!83;UBERON:0002329!4.16e-08!83;UBERON:0003077!4.16e-08!83;UBERON:0003059!4.16e-08!83;UBERON:0007282!4.16e-08!83;UBERON:0009618!4.16e-08!83;UBERON:0007285!4.16e-08!83;UBERON:0002199!8.85e-08!45;UBERON:0002416!8.85e-08!45;UBERON:0003102!2.92e-07!95|ontology_enrichment_uberon_v019=UBERON:0005933;1.52e-10;2!UBERON:0005942;1.52e-10;2!UBERON:0005932;1.52e-10;2!UBERON:0007846;1.93e-07;3!UBERON:0000043;1.93e-07;3!UBERON:0007845;1.93e-07;3!UBERON:0003124;4.10e-07;3!UBERON:0000920;4.10e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.46e-10,2;UBERON:0005942,1.46e-10,2;UBERON:0005932,1.46e-10,2;UBERON:0007846,2.06e-07,3;UBERON:0000043,2.06e-07,3;UBERON:0007845,2.06e-07,3;UBERON:0000920,4.43e-07,3|phase1_expression=1.63510541343501,7.49351833618441,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,1.30592814099919,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,1.04614076386261,0.469737994575059,0.809364721840658,0.421352420106746,0.408308342509787,0.61417158655884,0.103325781175765,0,2.22540236350701,0,0,0.673344455816265,0.250237039743928,0.277064115484183,0.438977620880838,0,0.300476117813194,0.113432183160021,0.538168907066586,0.85422955527427,0.635795703478686,0,0.412210116953756,0.772921620136887,0.744467425326359,0.506328996723799,0.292311015483596,0.252433774244115,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.698476837213859,0.763976851116555,0,1.71072446022705,1.02827492703324,3.30377363628309,0,0,0,0,0.129271715757778,0,1.690605505112,0,2.08014873822732,0,0,0,0.714889968290738,3.25572963234866,0,0,0.710783897485092,2.37585561880029,0,0,0,0,0,0,0,0,0,0.868687840005475,0.61642896765115,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,2.99602809578873,29.9161459204025,1.24324654030811,0,0,0.271265023699736,0,0.713715955188647,0.157702415033935,0,0.300946099727719,0,0,0,0,3.0409265063829,0,0,0,0.215714200818617,0,0,0,0,0.496215615637554,0.61384789315225,1.96462066103151,0,0.511707249066704,0,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0.229628896329213,0.364182336013434,0.655622074797121,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0.308097234229289,0.460511024178389,2.34322173223702,1.28904293841928,1.45016693914229,0.255679882248303,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.762520775695299,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0,0,0.243713489631284,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0,0,0,0,1.86434757865267,2.35797698431491,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0,0,1.38871292465715,0,0,0,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0.47748896947538,0,0.921482106297696,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0,0,1.27600463892768,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,3.28418620588199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0.411125773940253,0.596143835108969,0,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0.149254802886874,0.467426619694449,1.10961172300523,1.13641803165053,1.0062716070103,0,0.228840068396924,0.151230923763239,0,0.443565449968902,0.159296767163702,1.34940933649081,0.310525913752519,0.414706207840855,1.32920857278997,1.04349012362347,0,0,0.406870733204662,0.727394636810238,0,0,1.59238355479446,0.400027764663154,0.686791410365586,0,0,0,0,0.260994291965212,0,0.231522474323834,0.734210113519403,0.179088841081487,0,0,0.530067437837643,0.578742114812744,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,1.76337971845342,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,1.06498800657509,1.19298766662821,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0,0,0,0,0.795803100645473,0,0.11294608203896,0,0.150962843566674,0.617393264863557,1.96703604453562,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,1.5870805215462,5.57992527250127,0.924351257262837,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0.320182037633146,0,0,2.34640942403454,0,0,0,0.201273793591026,0|short_description=p@chr3:154834468..154834481,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1514 | |||
|description=CAGE_peak_at_chr3:154834468..154834481,+ | |||
|id=chr3:154834468..154834481,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.06e-14!180;CL:0000057!4.55e-13!75;CL:0002620!7.51e-09!23;CL:0000048!4.83e-08!430;CL:0000723!1.64e-07!436;CL:0000034!7.72e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.16e-14;3!CL:0002561;1.52e-10;2!CL:0002617;2.66e-10;2!CL:0002588;4.72e-10;2!CL:0000723;1.24e-09;61!CL:0000134;3.23e-08;55!CL:0000135;1.93e-07;3!CL:0000388;1.93e-07;3!CL:0000034;3.90e-07;69!CL:0002541;4.10e-07;3!CL:0000048;6.92e-07;58!CL:0002573;9.61e-07;2!CL:0000594;9.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.14e-14,3;CL:0002561,1.46e-10,2;CL:0002617,1.93e-10,2;CL:0002588,2.67e-10,2;CL:0000135,2.06e-07,3;CL:0000388,2.06e-07,3;CL:0002541,4.43e-07,3;CL:0000594,8.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.16e-08!83;UBERON:0002329!4.16e-08!83;UBERON:0003077!4.16e-08!83;UBERON:0003059!4.16e-08!83;UBERON:0007282!4.16e-08!83;UBERON:0009618!4.16e-08!83;UBERON:0007285!4.16e-08!83;UBERON:0002199!8.85e-08!45;UBERON:0002416!8.85e-08!45;UBERON:0003102!2.92e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.52e-10;2!UBERON:0005942;1.52e-10;2!UBERON:0005932;1.52e-10;2!UBERON:0007846;1.93e-07;3!UBERON:0000043;1.93e-07;3!UBERON:0007845;1.93e-07;3!UBERON:0003124;4.10e-07;3!UBERON:0000920;4.10e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.46e-10,2;UBERON:0005942,1.46e-10,2;UBERON:0005932,1.46e-10,2;UBERON:0007846,2.06e-07,3;UBERON:0000043,2.06e-07,3;UBERON:0007845,2.06e-07,3;UBERON:0000920,4.43e-07,3 | |||
|phase1_expression=1.63510541343501,7.49351833618441,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,1.30592814099919,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,1.04614076386261,0.469737994575059,0.809364721840658,0.421352420106746,0.408308342509787,0.61417158655884,0.103325781175765,0,2.22540236350701,0,0,0.673344455816265,0.250237039743928,0.277064115484183,0.438977620880838,0,0.300476117813194,0.113432183160021,0.538168907066586,0.85422955527427,0.635795703478686,0,0.412210116953756,0.772921620136887,0.744467425326359,0.506328996723799,0.292311015483596,0.252433774244115,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.698476837213859,0.763976851116555,0,1.71072446022705,1.02827492703324,3.30377363628309,0,0,0,0,0.129271715757778,0,1.690605505112,0,2.08014873822732,0,0,0,0.714889968290738,3.25572963234866,0,0,0.710783897485092,2.37585561880029,0,0,0,0,0,0,0,0,0,0.868687840005475,0.61642896765115,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,2.99602809578873,29.9161459204025,1.24324654030811,0,0,0.271265023699736,0,0.713715955188647,0.157702415033935,0,0.300946099727719,0,0,0,0,3.0409265063829,0,0,0,0.215714200818617,0,0,0,0,0.496215615637554,0.61384789315225,1.96462066103151,0,0.511707249066704,0,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0.229628896329213,0.364182336013434,0.655622074797121,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0.308097234229289,0.460511024178389,2.34322173223702,1.28904293841928,1.45016693914229,0.255679882248303,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.762520775695299,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0,0,0.243713489631284,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0,0,0,0,1.86434757865267,2.35797698431491,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0,0,1.38871292465715,0,0,0,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0.47748896947538,0,0.921482106297696,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0,0,1.27600463892768,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,3.28418620588199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0.411125773940253,0.596143835108969,0,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0.149254802886874,0.467426619694449,1.10961172300523,1.13641803165053,1.0062716070103,0,0.228840068396924,0.151230923763239,0,0.443565449968902,0.159296767163702,1.34940933649081,0.310525913752519,0.414706207840855,1.32920857278997,1.04349012362347,0,0,0.406870733204662,0.727394636810238,0,0,1.59238355479446,0.400027764663154,0.686791410365586,0,0,0,0,0.260994291965212,0,0.231522474323834,0.734210113519403,0.179088841081487,0,0,0.530067437837643,0.578742114812744,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,1.76337971845342,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,1.06498800657509,1.19298766662821,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0,0,0,0,0.795803100645473,0,0.11294608203896,0,0.150962843566674,0.617393264863557,1.96703604453562,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,1.5870805215462,5.57992527250127,0.924351257262837,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0.320182037633146,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr3:154834468..154834481,+ | |||
}} |
Revision as of 22:17, 12 September 2013
Short description: | p@chr3:154834468..154834481, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:154834468..154834481, + |
Coexpression cluster: | C1514_Neutrophils_Adipocyte_tenocyte_chorionic_Hair_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.14e-14 | 3 |
outer root sheath cell | 1.46e-10 | 2 |
adipocyte of breast | 1.93e-10 | 2 |
smooth muscle cell of the umbilical vein | 2.67e-10 | 2 |
fibrocyte | 2.06e-07 | 3 |
tendon cell | 2.06e-07 | 3 |
chorionic membrane mesenchymal stem cell | 4.43e-07 | 3 |
skeletal muscle satellite cell | 8.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.46e-10 | 2 |
hair outer root sheath | 1.46e-10 | 2 |
bulb of hair follicle | 1.46e-10 | 2 |
dense regular connective tissue | 2.06e-07 | 3 |
tendon | 2.06e-07 | 3 |
regular connective tissue | 2.06e-07 | 3 |
egg chorion | 4.43e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.