FFCP PHASE1:Mm9::chr12:109416693..109416707,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=170|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:109416693..109416707,+|id=chr12:109416693..109416707,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,5.39e-15,9;CL:0000789,5.39e-15,9;CL:0002420,5.39e-15,9;CL:0002419,5.39e-15,9;CL:0000790,5.39e-15,9;CL:0000084,2.49e-12,11;CL:0000827,2.49e-12,11;CL:0000988,4.25e-12,32;CL:0002032,4.25e-12,32;CL:0000037,4.25e-12,32;CL:0000837,4.25e-12,32;CL:0000838,2.50e-11,12;CL:0000542,1.77e-10,13;CL:0000051,1.77e-10,13;CL:0000624,7.14e-10,8;CL:0000625,1.19e-09,1;CL:0000815,2.52e-09,1;CL:0000792,2.52e-09,1;CL:0002320,2.71e-08,46;CL:0000134,2.71e-08,46;CL:0000738,4.49e-08,17;CL:0002087,4.49e-08,17;CL:0000219,5.36e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.71e-08,46|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,1.42035655785734,0,0.468129052643987,0,0,0.684802919724823,3.67165690159789,0,0,0,0.157731082679119,0,0.42438965179803,0.17008658030214,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0.577703239502549,0.498703936075477,0.204169356262369,0,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,7.97898356212479,3.6970317905671,0,0,0,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,0,0.662605622854841,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0.884610551949874,0,0,0,0,0,0.41889341362691,0,0.958520996047362,1.79970819298022,1.65191295194984,0,0.915001205637253,0.376963056338593,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.272145996605311,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,1.02939162845886,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0.482354319504834,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0,0,0,0.849892149969277,1.11961161858926,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0,0.360586348559907,0.295379054349154,0,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.350630706544707,0,0,0,0.167884616364078,0,0,0.183151624267265,0,0,0,0.920650473014354,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0,0,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr12:109416693..109416707,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=170 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:109416693..109416707,+ | |||
|id=chr12:109416693..109416707,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.39e-15,9;CL:0000789,5.39e-15,9;CL:0002420,5.39e-15,9;CL:0002419,5.39e-15,9;CL:0000790,5.39e-15,9;CL:0000084,2.49e-12,11;CL:0000827,2.49e-12,11;CL:0000988,4.25e-12,32;CL:0002032,4.25e-12,32;CL:0000037,4.25e-12,32;CL:0000837,4.25e-12,32;CL:0000838,2.50e-11,12;CL:0000542,1.77e-10,13;CL:0000051,1.77e-10,13;CL:0000624,7.14e-10,8;CL:0000625,1.19e-09,1;CL:0000815,2.52e-09,1;CL:0000792,2.52e-09,1;CL:0002320,2.71e-08,46;CL:0000134,2.71e-08,46;CL:0000738,4.49e-08,17;CL:0002087,4.49e-08,17;CL:0000219,5.36e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.71e-08,46 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,1.42035655785734,0,0.468129052643987,0,0,0.684802919724823,3.67165690159789,0,0,0,0.157731082679119,0,0.42438965179803,0.17008658030214,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0.577703239502549,0.498703936075477,0.204169356262369,0,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,7.97898356212479,3.6970317905671,0,0,0,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,0,0.662605622854841,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0.884610551949874,0,0,0,0,0,0.41889341362691,0,0.958520996047362,1.79970819298022,1.65191295194984,0,0.915001205637253,0.376963056338593,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.272145996605311,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,1.02939162845886,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0.482354319504834,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0,0,0,0.849892149969277,1.11961161858926,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0,0.360586348559907,0.295379054349154,0,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.350630706544707,0,0,0,0.167884616364078,0,0,0.183151624267265,0,0,0,0.920650473014354,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0,0,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr12:109416693..109416707,+ | |||
}} |
Revision as of 22:09, 12 September 2013
Short description: | p@chr12:109416693..109416707, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109416693..109416707, + |
Coexpression cluster: | MCL_coexpression_mm9:170 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.39e-15 | 9 |
alpha-beta T cell | 5.39e-15 | 9 |
immature T cell | 5.39e-15 | 9 |
mature T cell | 5.39e-15 | 9 |
immature alpha-beta T cell | 5.39e-15 | 9 |
T cell | 2.49e-12 | 11 |
pro-T cell | 2.49e-12 | 11 |
hematopoietic cell | 4.25e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.25e-12 | 32 |
hematopoietic stem cell | 4.25e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.25e-12 | 32 |
lymphoid lineage restricted progenitor cell | 2.50e-11 | 12 |
lymphocyte | 1.77e-10 | 13 |
common lymphoid progenitor | 1.77e-10 | 13 |
CD4-positive, alpha-beta T cell | 7.14e-10 | 8 |
CD8-positive, alpha-beta T cell | 1.19e-09 | 1 |
regulatory T cell | 2.52e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.52e-09 | 1 |
connective tissue cell | 2.71e-08 | 46 |
mesenchymal cell | 2.71e-08 | 46 |
leukocyte | 4.49e-08 | 17 |
nongranular leukocyte | 4.49e-08 | 17 |
motile cell | 5.36e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.71e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.