FFCP PHASE1:Hg19::chr3:128369643..128369678,-: Difference between revisions
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{{FFCP | 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211.137495361824,153.079163239805,313.710511740068,255.988478639707,305.179720225102,306.860753982575,179.447055012046,457.22055221531,493.942825996404,314.817596499666,300.405803799352,309.449669834563,235.04482585722,158.762497623346,79.5229689809303,116.181505413174,200.941435581274,173.02461123932,165.345254535616,227.448604358567,222.081160958132,128.181564548432,248.892538198655,307.499869881471,270.088674307105,175.718959968292,196.857498587464,246.227198160848,215.837988564757,237.028925390825,228.078878276311,514.220622860766,656.808333312964,457.222304153173,241.854986956225,259.822828171658,236.157798194595,227.530679772412,841.502925779549,393.545460069297,124.887335845258,144.53023370476,455.604249285969,291.793419239102,348.020177558117,203.736779409167,213.747352559153,293.234118890863,576.235518614405,137.747428768793,323.639017689482,223.047299381484,261.720249359699,200.04366162654,189.838253180977,533.826873154546,63.796908957623,87.1267531400017,115.050465319273,143.352298922518,156.853678873109,179.582797306481,107.496889345451,334.697532522521,225.805536019514,261.200780193645,317.373590772834,226.674094410531,196.802756853501,447.316644251962,448.028414977129,555.360667364116,316.303018809399,411.31351936546,421.770519036758,810.322682193506,373.086688923911,417.970632367097,438.834085169233,461.164140938918,640.969434833137,498.704617486545,478.156257640506,550.292349135049,521.745061811734,477.668939002157,515.610257276549,434.131072329374,427.526197785217,510.20014595182,510.901169626222,381.773957261973,278.419324205555,267.161858632213,280.849073630777,285.177869996751,319.363678815309,786.357315571853,479.185520048128,342.552653449044,288.013958058849,259.665643481362,337.582465438604,454.24692877379,330.68034676469,234.113118378292,354.768916380212,388.567613502067,199.612142980011,219.348266999311,429.050258122464,113.095400772116,171.671932087501,237.695199320607,173.706448699707,357.09473524259,415.847761611293,259.068663237677,156.390143558555,257.233760292574,449.825526874051,258.21975887291,258.852966054088,340.746480804567,234.523127032431,216.525170617082,191.928164286094,321.294319211596,224.425806484589,456.580505576328,118.829380336841,172.64251961279,376.526674713966,318.958363705379,197.942979953146,187.3335550988,341.037637548891,379.438146440615,121.971298458177,92.1027746116302,113.340039930577,138.043313134028,119.481984009094,178.564025862611,119.007550830674,212.72643618614,445.590641994656,274.043667336801,252.030894368787,326.013429876254,405.409167481599,334.824564139149,523.149664165803,219.915000093228,251.324515604586,334.487996807764,366.145558885029,280.541294694796,235.239033171319,127.983722851858,79.6699660586124,103.343398250592,124.041324739282,82.0462213527329,417.224160578316,150.848198230345,141.576351709495,425.448884039852,87.855101084039,105.593088776711,208.189202253165,204.895972216168,310.192188458748,232.88788885023,443.125016386289,146.134925900188,150.75119700605,153.179217785623,175.300689381901,185.714657684316,80.757413216825,425.733416073646,157.063299927633,320.436545368434,240.786850695073,186.339350668543,115.507950176623,228.298159422998,225.668037448748,231.694584407043,218.820269356167,192.058286730694,184.566329704363,363.111890844314,242.462269496928,270.041279681771,320.927384044724,420.181996909788,406.680571605923,344.949556970853,275.388073086165,338.912756673434,375.50720894539,154.088063250719,166.211084300264,202.967525484185,198.655796161188,170.541868863875,181.443106947168,199.191152052427,244.076483286193,343.23429327923,483.081099413355,209.836535895502,221.182275230005,532.399179481244,140.715136686742,359.40673432998,117.981388736082,142.285225756674,177.515405585028,400.688136433872,271.519539043797,235.529122655451,169.10043582498,237.298184406919,163.03743073265,307.645399886271,298.707582792826,303.220056330401,159.250276881262,128.899366311832,158.420172144831,96.4335025652234,223.249326697499,372.367013184918,213.525140427715,311.058498167004,177.516159742956,196.350232818761,146.33676866821,316.981282838079,404.834368977324,250.137916533848,293.578528511371,191.795885190364,195.881779144166,87.8919605826306,144.806194206653,167.38867579227,164.740586572908,166.833154106404,126.446193020663,252.1845589438,373.608819092828,297.718619335457,154.79660775474,146.133619563415,207.107563019857,297.862318995785,256.481134896976,329.764641143058,383.684808430387,287.677700607541,278.997077743059,220.562485859247,237.637367491492,233.96530253155,254.984844513051,165.044510744642,145.858663997971|short_description=p1@RPN1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10381 | |||
|TSSclassifier=S | |||
|UniProt=F8WF32,B4DNJ5,F5H6I5 | |||
|association_with_transcript=0bp_to_ENST00000476931,ENST00000481168,ENST00000497415,ENST00000537139,ENST00000545956_5end | |||
|coexpression_cluster_id=C2341 | |||
|description=CAGE_peak_1_at_RPN1_5end | |||
|id=chr3:128369643..128369678,- | |||
|ontology_enrichment_celltype=CL:0000548!6.39e-34!679;CL:0000004!6.39e-34!679;CL:0000255!6.39e-34!679;CL:0000012!1.66e-33!682;CL:0000144!1.40e-28!625;CL:0002371!1.06e-23!591;CL:0000220!1.04e-17!246;CL:0000003!2.18e-17!722;CL:0002321!4.42e-17!248;CL:0000055!7.27e-17!180;CL:0000063!1.70e-16!578;CL:0000222!2.08e-16!119;CL:0000066!1.50e-11!254;CL:0000183!5.84e-11!59;CL:0000192!1.24e-10!42;CL:0000514!1.24e-10!42;CL:0000057!4.82e-10!75;CL:0000680!8.18e-10!57;CL:0000056!8.18e-10!57;CL:0000355!8.18e-10!57;CL:0000359!9.51e-10!32;CL:0000187!2.13e-09!54;CL:0000048!5.82e-08!430;CL:0000723!7.06e-08!436;CL:0000034!6.73e-07!444;CL:0000213!8.91e-07!57;CL:0000215!8.91e-07!57;CL:0000393!9.38e-07!60;CL:0000211!9.38e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.22e-09;32!CL:0000192;1.50e-07;43!CL:0000134;1.68e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.15e-17,250;CL:0000222,2.47e-16,121;CL:0000066,9.40e-12,253;CL:0000057,2.24e-10,76;CL:0000192,4.37e-10,43;CL:0000514,4.37e-10,43;CL:0000359,9.51e-10,32;CL:0000680,2.16e-09,58;CL:0000056,2.16e-09,58;CL:0000355,2.16e-09,58;CL:0000187,5.62e-09,55;CL:0000048,1.15e-07,427;CL:0000723,1.39e-07,433;CL:0000213,4.83e-07,58;CL:0000215,4.83e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.50e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!6.56e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.59e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.56e-07,14 | |||
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| |||
|short_description=p1@RPN1 | |||
}} |
Revision as of 21:25, 12 September 2013
Short description: | p1@RPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RPN1_5end |
Coexpression cluster: | C2341_Smooth_Fibroblast_mesenchymal_Hepatic_Adipocyte_Pericytes_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000476931, ENST00000481168, ENST00000497415, ENST00000537139, ENST00000545956_5end |
EntrezGene: | RPN1 |
HGNC: | 10381 |
UniProt: | F8WF32B4DNJ5F5H6I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.15e-17 | 250 |
mesodermal cell | 2.47e-16 | 121 |
epithelial cell | 9.40e-12 | 253 |
fibroblast | 2.24e-10 | 76 |
smooth muscle cell | 4.37e-10 | 43 |
smooth muscle myoblast | 4.37e-10 | 43 |
vascular associated smooth muscle cell | 9.51e-10 | 32 |
muscle precursor cell | 2.16e-09 | 58 |
myoblast | 2.16e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.16e-09 | 58 |
muscle cell | 5.62e-09 | 55 |
multi fate stem cell | 1.15e-07 | 427 |
somatic stem cell | 1.39e-07 | 433 |
lining cell | 4.83e-07 | 58 |
barrier cell | 4.83e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.56e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.