FFCP PHASE1:Mm9::chr11:87613391..87613402,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=130|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:87613391..87613402,+|id=chr11:87613391..87613402,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,6.12e-24,19;CL:0000557,4.54e-17,7;CL:0000988,2.40e-14,32;CL:0002032,2.40e-14,32;CL:0000037,2.40e-14,32;CL:0000837,2.40e-14,32;CL:0002320,4.79e-10,46;CL:0000134,4.79e-10,46;CL:0000219,1.40e-08,54;CL:0000763,7.36e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007823!3.42e-11!5;UBERON:0002529!2.44e-09!6;UBERON:0002106!1.22e-08!6;UBERON:0004457!1.22e-08!6;UBERON:0000042!1.22e-08!6;UBERON:0004854!1.22e-08!6;UBERON:0009034!1.22e-08!6;UBERON:0002095!1.22e-08!6;UBERON:0004782!1.22e-08!6;UBERON:0003281!1.22e-08!6;UBERON:0009664!1.22e-08!6;UBERON:0002296!1.22e-08!6;UBERON:0005602!1.22e-08!6;UBERON:0001179!1.22e-08!6;UBERON:0006293!1.22e-08!6;UBERON:0000981!2.54e-08!4;UBERON:0002495!2.54e-08!4;UBERON:0003608!2.54e-08!4;UBERON:0003826!2.54e-08!4;UBERON:0008202!2.54e-08!4;UBERON:0004375!2.54e-08!4;UBERON:0002428!2.54e-08!4;UBERON:0003464!2.54e-08!4;UBERON:0003606!2.54e-08!4;UBERON:0009749!2.54e-08!4;UBERON:0003860!2.54e-08!4;UBERON:0005856!2.54e-08!4;UBERON:0005866!2.54e-08!4;UBERON:0007828!2.54e-08!4;UBERON:0005254!2.54e-08!4;UBERON:0001271!2.54e-08!4;UBERON:0002091!2.54e-08!4;UBERON:0001464!2.54e-08!4;UBERON:0003285!2.54e-08!4;UBERON:0010129!2.54e-08!4;UBERON:0006234!2.54e-08!4;UBERON:0003887!1.11e-07!10;UBERON:0005418!9.84e-07!5;UBERON:0002472!9.84e-07!5;UBERON:0008784!9.84e-07!5;UBERON:0006058!9.84e-07!5;UBERON:0004709!9.84e-07!5;UBERON:0005420!9.84e-07!5;UBERON:0006057!9.84e-07!5;UBERON:0000978!9.84e-07!5;UBERON:0002103!9.84e-07!5;UBERON:0000376!9.84e-07!5;UBERON:0000154!9.84e-07!5;UBERON:0005730!9.84e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.79e-10,46;UBERON:0002371,7.36e-08,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,3.59445373517761,4.19931911695385,4.70159840170339,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83098462238529,13.6394390770799,10.5140494776369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608580364165509,0.482354319504834,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.441182838239031,0|short_description=p@chr11:87613391..87613402,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=130 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:87613391..87613402,+ | |||
|id=chr11:87613391..87613402,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,6.12e-24,19;CL:0000557,4.54e-17,7;CL:0000988,2.40e-14,32;CL:0002032,2.40e-14,32;CL:0000037,2.40e-14,32;CL:0000837,2.40e-14,32;CL:0002320,4.79e-10,46;CL:0000134,4.79e-10,46;CL:0000219,1.40e-08,54;CL:0000763,7.36e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007823!3.42e-11!5;UBERON:0002529!2.44e-09!6;UBERON:0002106!1.22e-08!6;UBERON:0004457!1.22e-08!6;UBERON:0000042!1.22e-08!6;UBERON:0004854!1.22e-08!6;UBERON:0009034!1.22e-08!6;UBERON:0002095!1.22e-08!6;UBERON:0004782!1.22e-08!6;UBERON:0003281!1.22e-08!6;UBERON:0009664!1.22e-08!6;UBERON:0002296!1.22e-08!6;UBERON:0005602!1.22e-08!6;UBERON:0001179!1.22e-08!6;UBERON:0006293!1.22e-08!6;UBERON:0000981!2.54e-08!4;UBERON:0002495!2.54e-08!4;UBERON:0003608!2.54e-08!4;UBERON:0003826!2.54e-08!4;UBERON:0008202!2.54e-08!4;UBERON:0004375!2.54e-08!4;UBERON:0002428!2.54e-08!4;UBERON:0003464!2.54e-08!4;UBERON:0003606!2.54e-08!4;UBERON:0009749!2.54e-08!4;UBERON:0003860!2.54e-08!4;UBERON:0005856!2.54e-08!4;UBERON:0005866!2.54e-08!4;UBERON:0007828!2.54e-08!4;UBERON:0005254!2.54e-08!4;UBERON:0001271!2.54e-08!4;UBERON:0002091!2.54e-08!4;UBERON:0001464!2.54e-08!4;UBERON:0003285!2.54e-08!4;UBERON:0010129!2.54e-08!4;UBERON:0006234!2.54e-08!4;UBERON:0003887!1.11e-07!10;UBERON:0005418!9.84e-07!5;UBERON:0002472!9.84e-07!5;UBERON:0008784!9.84e-07!5;UBERON:0006058!9.84e-07!5;UBERON:0004709!9.84e-07!5;UBERON:0005420!9.84e-07!5;UBERON:0006057!9.84e-07!5;UBERON:0000978!9.84e-07!5;UBERON:0002103!9.84e-07!5;UBERON:0000376!9.84e-07!5;UBERON:0000154!9.84e-07!5;UBERON:0005730!9.84e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.79e-10,46;UBERON:0002371,7.36e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,3.59445373517761,4.19931911695385,4.70159840170339,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83098462238529,13.6394390770799,10.5140494776369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608580364165509,0.482354319504834,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.441182838239031,0 | |||
|short_description=p@chr11:87613391..87613402,+ | |||
}} |
Revision as of 21:23, 12 September 2013
Short description: | p@chr11:87613391..87613402, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:87613391..87613402, + |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 6.12e-24 | 19 |
granulocyte monocyte progenitor cell | 4.54e-17 | 7 |
hematopoietic cell | 2.40e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.40e-14 | 32 |
hematopoietic stem cell | 2.40e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.40e-14 | 32 |
connective tissue cell | 4.79e-10 | 46 |
mesenchymal cell | 4.79e-10 | 46 |
motile cell | 1.40e-08 | 54 |
myeloid cell | 7.36e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.79e-10 | 46 |
bone marrow | 7.36e-08 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.