FFCP PHASE1:Mm9::chr11:87025927..87025940,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:87025927..87025940,-|id=chr11:87025927..87025940,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.41e-11,9|ontology_enrichment_disease=DOID:0060100!6.26e-08!3;DOID:4045!6.26e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-33,3;DOID:4045,3.61e-33,3;DOID:0050686,5.29e-17,6|ontology_enrichment_uberon=UBERON:0002106!9.70e-12!6;UBERON:0004457!9.70e-12!6;UBERON:0000042!9.70e-12!6;UBERON:0004854!9.70e-12!6;UBERON:0009034!9.70e-12!6;UBERON:0002095!9.70e-12!6;UBERON:0004782!9.70e-12!6;UBERON:0003281!9.70e-12!6;UBERON:0009664!9.70e-12!6;UBERON:0002296!9.70e-12!6;UBERON:0005602!9.70e-12!6;UBERON:0001179!9.70e-12!6;UBERON:0006293!9.70e-12!6;UBERON:0003887!6.97e-09!10;UBERON:0002193!1.82e-08!48;UBERON:0002405!3.81e-07!70;UBERON:0002465!7.46e-07!3;UBERON:0000945!9.63e-07!16;UBERON:0010039!9.63e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.11e-12,1;UBERON:0001097,7.11e-12,1;UBERON:0003968,7.11e-12,1;UBERON:0001467,7.11e-12,1;UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809901069559304,0,0.630924330716475,1.37114433605739,0.84877930359606,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,8.5946887897618,9.42342739152837,12.9410927366823,10.9287277593351,13.5942898848723,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.915112692826091,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr11:87025927..87025940,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:87025927..87025940,- | |||
|id=chr11:87025927..87025940,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.41e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.26e-08!3;DOID:4045!6.26e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-33,3;DOID:4045,3.61e-33,3;DOID:0050686,5.29e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0002106!9.70e-12!6;UBERON:0004457!9.70e-12!6;UBERON:0000042!9.70e-12!6;UBERON:0004854!9.70e-12!6;UBERON:0009034!9.70e-12!6;UBERON:0002095!9.70e-12!6;UBERON:0004782!9.70e-12!6;UBERON:0003281!9.70e-12!6;UBERON:0009664!9.70e-12!6;UBERON:0002296!9.70e-12!6;UBERON:0005602!9.70e-12!6;UBERON:0001179!9.70e-12!6;UBERON:0006293!9.70e-12!6;UBERON:0003887!6.97e-09!10;UBERON:0002193!1.82e-08!48;UBERON:0002405!3.81e-07!70;UBERON:0002465!7.46e-07!3;UBERON:0000945!9.63e-07!16;UBERON:0010039!9.63e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.11e-12,1;UBERON:0001097,7.11e-12,1;UBERON:0003968,7.11e-12,1;UBERON:0001467,7.11e-12,1;UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809901069559304,0,0.630924330716475,1.37114433605739,0.84877930359606,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,8.5946887897618,9.42342739152837,12.9410927366823,10.9287277593351,13.5942898848723,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.915112692826091,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:87025927..87025940,- | |||
}} |
Revision as of 21:20, 12 September 2013
Short description: | p@chr11:87025927..87025940, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:87025927..87025940, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.41e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.11e-12 | 1 |
axillary lymph node | 7.11e-12 | 1 |
peripheral lymph node | 7.11e-12 | 1 |
shoulder | 7.11e-12 | 1 |
skeletal muscle tissue | 1.41e-11 | 9 |
striated muscle tissue | 1.41e-11 | 9 |
muscle tissue | 1.41e-11 | 9 |
multilaminar epithelium | 1.41e-11 | 9 |
epithelial vesicle | 1.41e-11 | 9 |
musculature | 1.41e-11 | 9 |
somite | 1.41e-11 | 9 |
myotome | 1.41e-11 | 9 |
presomitic mesoderm | 1.41e-11 | 9 |
presumptive segmental plate | 1.41e-11 | 9 |
dermomyotome | 1.41e-11 | 9 |
trunk paraxial mesoderm | 1.41e-11 | 9 |
musculature of body | 1.74e-10 | 10 |
dense mesenchyme tissue | 1.36e-09 | 11 |
paraxial mesoderm | 1.36e-09 | 11 |
presumptive paraxial mesoderm | 1.36e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.61e-33 | 3 |
muscle cancer | 3.61e-33 | 3 |
organ system cancer | 5.29e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.