FFCP PHASE1:Mm9::chr11:86437788..86437799,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=167|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:86437788..86437799,-|id=chr11:86437788..86437799,-|ontology_enrichment_celltype=CL:0000219!5.09e-12!54;CL:0000333!1.61e-11!10;CL:0000095!1.61e-11!10;CL:0000243!1.61e-11!10;CL:0000123!1.61e-11!10;CL:0000125!1.61e-11!10;CL:0000030!1.61e-11!10;CL:0000339!1.61e-11!10;CL:0000144!1.43e-10!121;CL:0000012!1.43e-10!121;CL:0000557!4.48e-10!7;CL:0000192!1.60e-08!3;CL:0000359!1.60e-08!3;CL:0002539!1.60e-08!3;CL:0000514!1.60e-08!3;CL:0000049!1.68e-08!19;CL:0002453!5.03e-08!8;CL:0002371!9.32e-08!118;CL:0000215!1.26e-07!3;CL:0000548!3.56e-07!115;CL:0000004!3.56e-07!115;CL:0000255!3.56e-07!115;CL:0000128!5.01e-07!6;CL:0000126!5.01e-07!6;CL:0000127!5.01e-07!6;CL:0002194!5.28e-07!4;CL:0000766!5.28e-07!4;CL:0000576!5.28e-07!4;CL:0000235!5.28e-07!4;CL:0002009!5.28e-07!4;CL:0000040!5.28e-07!4;CL:0000559!5.28e-07!4|ontology_enrichment_celltype_v019_2=CL:0000557,7.67e-28,7;CL:0000049,4.06e-26,19;CL:0002194,3.24e-18,4;CL:0000766,3.24e-18,4;CL:0000234,3.24e-18,4;CL:0000576,3.24e-18,4;CL:0000235,3.24e-18,4;CL:0000864,3.24e-18,4;CL:0002009,3.24e-18,4;CL:0000040,3.24e-18,4;CL:0000559,3.24e-18,4;CL:0002476,1.19e-16,2;CL:0000988,2.39e-15,32;CL:0002032,2.39e-15,32;CL:0000037,2.39e-15,32;CL:0000837,2.39e-15,32;CL:0000763,2.84e-12,16;CL:0000473,1.08e-10,7;CL:0002320,1.58e-10,46;CL:0000134,1.58e-10,46;CL:0000034,2.81e-09,97;CL:0000219,6.94e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!1.44e-08!5;UBERON:0001981!1.44e-08!5;UBERON:0002049!1.44e-08!5;UBERON:0007500!1.44e-08!5;UBERON:0007798!1.44e-08!5;UBERON:0004537!1.44e-08!5;UBERON:0006965!1.44e-08!5;UBERON:0001135!1.60e-08!3;UBERON:0004237!1.60e-08!3;UBERON:0004695!1.60e-08!3;UBERON:0002111!1.60e-08!3;UBERON:0004178!1.60e-08!3;UBERON:0002204!9.23e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.84e-12,16;UBERON:0002384,1.58e-10,46;UBERON:0001474,6.10e-09,22;UBERON:0004765,6.10e-09,22;UBERON:0001434,6.10e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0.683045484958446,0,0.629484089877886,0.405507724878058,0.550640256485045,0.782391344348039,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87556298814209,2.99951365496704,1.27070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,2.88963330989554,3.21888340344413,1.79659965945751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:86437788..86437799,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=167 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:86437788..86437799,- | |||
|id=chr11:86437788..86437799,- | |||
|ontology_enrichment_celltype=CL:0000219!5.09e-12!54;CL:0000333!1.61e-11!10;CL:0000095!1.61e-11!10;CL:0000243!1.61e-11!10;CL:0000123!1.61e-11!10;CL:0000125!1.61e-11!10;CL:0000030!1.61e-11!10;CL:0000339!1.61e-11!10;CL:0000144!1.43e-10!121;CL:0000012!1.43e-10!121;CL:0000557!4.48e-10!7;CL:0000192!1.60e-08!3;CL:0000359!1.60e-08!3;CL:0002539!1.60e-08!3;CL:0000514!1.60e-08!3;CL:0000049!1.68e-08!19;CL:0002453!5.03e-08!8;CL:0002371!9.32e-08!118;CL:0000215!1.26e-07!3;CL:0000548!3.56e-07!115;CL:0000004!3.56e-07!115;CL:0000255!3.56e-07!115;CL:0000128!5.01e-07!6;CL:0000126!5.01e-07!6;CL:0000127!5.01e-07!6;CL:0002194!5.28e-07!4;CL:0000766!5.28e-07!4;CL:0000576!5.28e-07!4;CL:0000235!5.28e-07!4;CL:0002009!5.28e-07!4;CL:0000040!5.28e-07!4;CL:0000559!5.28e-07!4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.67e-28,7;CL:0000049,4.06e-26,19;CL:0002194,3.24e-18,4;CL:0000766,3.24e-18,4;CL:0000234,3.24e-18,4;CL:0000576,3.24e-18,4;CL:0000235,3.24e-18,4;CL:0000864,3.24e-18,4;CL:0002009,3.24e-18,4;CL:0000040,3.24e-18,4;CL:0000559,3.24e-18,4;CL:0002476,1.19e-16,2;CL:0000988,2.39e-15,32;CL:0002032,2.39e-15,32;CL:0000037,2.39e-15,32;CL:0000837,2.39e-15,32;CL:0000763,2.84e-12,16;CL:0000473,1.08e-10,7;CL:0002320,1.58e-10,46;CL:0000134,1.58e-10,46;CL:0000034,2.81e-09,97;CL:0000219,6.94e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.44e-08!5;UBERON:0001981!1.44e-08!5;UBERON:0002049!1.44e-08!5;UBERON:0007500!1.44e-08!5;UBERON:0007798!1.44e-08!5;UBERON:0004537!1.44e-08!5;UBERON:0006965!1.44e-08!5;UBERON:0001135!1.60e-08!3;UBERON:0004237!1.60e-08!3;UBERON:0004695!1.60e-08!3;UBERON:0002111!1.60e-08!3;UBERON:0004178!1.60e-08!3;UBERON:0002204!9.23e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.84e-12,16;UBERON:0002384,1.58e-10,46;UBERON:0001474,6.10e-09,22;UBERON:0004765,6.10e-09,22;UBERON:0001434,6.10e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0.683045484958446,0,0.629484089877886,0.405507724878058,0.550640256485045,0.782391344348039,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87556298814209,2.99951365496704,1.27070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,2.88963330989554,3.21888340344413,1.79659965945751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:86437788..86437799,- | |||
}} |
Revision as of 21:18, 12 September 2013
Short description: | p@chr11:86437788..86437799, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86437788..86437799, - |
Coexpression cluster: | MCL_coexpression_mm9:167 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.67e-28 | 7 |
common myeloid progenitor | 4.06e-26 | 19 |
monopoietic cell | 3.24e-18 | 4 |
myeloid leukocyte | 3.24e-18 | 4 |
phagocyte | 3.24e-18 | 4 |
monocyte | 3.24e-18 | 4 |
macrophage | 3.24e-18 | 4 |
tissue-resident macrophage | 3.24e-18 | 4 |
macrophage dendritic cell progenitor | 3.24e-18 | 4 |
monoblast | 3.24e-18 | 4 |
promonocyte | 3.24e-18 | 4 |
bone marrow macrophage | 1.19e-16 | 2 |
hematopoietic cell | 2.39e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.39e-15 | 32 |
hematopoietic stem cell | 2.39e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.39e-15 | 32 |
myeloid cell | 2.84e-12 | 16 |
defensive cell | 1.08e-10 | 7 |
connective tissue cell | 1.58e-10 | 46 |
mesenchymal cell | 1.58e-10 | 46 |
stem cell | 2.81e-09 | 97 |
motile cell | 6.94e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.84e-12 | 16 |
connective tissue | 1.58e-10 | 46 |
bone element | 6.10e-09 | 22 |
skeletal element | 6.10e-09 | 22 |
skeletal system | 6.10e-09 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.