FFCP PHASE1:Mm9::chr11:86400319..86400350,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75909|HGNC=|MCL_coexpression_id=1093|UniProt=|association_with_transcript=32bp_to_ENSMUST00000150176_5end|description=CAGE_peak_4_at_Vmp1_5end|id=chr11:86400319..86400350,-|ontology_enrichment_celltype=CL:0000063!8.03e-12!66;CL:0000219!3.73e-11!54;CL:0000144!2.07e-10!121;CL:0000012!2.07e-10!121;CL:0002371!3.02e-09!118;CL:0000548!8.55e-09!115;CL:0000004!8.55e-09!115;CL:0000255!8.55e-09!115;CL:0002320!8.96e-08!46;CL:0000134!8.96e-08!46;CL:0000223!2.49e-07!20;CL:0000066!3.18e-07!25|ontology_enrichment_celltype_v019_2=CL:0000219,2.47e-12,54;CL:0002320,1.37e-08,46;CL:0000134,1.37e-08,46;CL:0000066,6.62e-08,25;CL:0000223,6.65e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!8.96e-08!46;UBERON:0002204!7.81e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.37e-08,46|phase1_expression=0.160148847104794,4.53668029931169,6.3699893514535,7.25914107136392,2.50447864973174,2.68606835059024,4.20502753071946,3.61545305636414,4.08287294239834,1.40438715793196,5.82141091966717,3.43020283679947,0,0.174840804837995,2.33176833270964,3.23960427823721,3.49780939064073,1.10411757875383,0.822686601634433,0.84877930359606,2.04103896362567,3.17731043842833,8.61959304158487,10.3995074815714,13.9939661450974,8.03924749761028,9.04600191934057,5.817723282519,16.9120843316173,4.53654233567875,10.199603490144,3.81018404075779,4.30545351309199,0,4.04392267651784,4.15586613396231,1.42918549383658,1.67412652294763,4.6880120671428,3.66466620781659,9.99993529652724,2.73218193983378,2.42755176515577,55.6463935452052,57.1765892078062,101.134260441087,10.1710874765245,7.41285531693518,11.8630538676615,18.0819806139084,6.01941612989059,15.8127820801469,0.167782606057736,0,0.336093799142464,15.4355661621568,22.9226751951005,21.6582278756526,0,0,0,10.5041804941431,14.2287167377782,29.6966906702862,56.3653826663175,29.8401648277362,28.16241038873,6.53171119046643,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0.919218786610021,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0,0.294628585473668,0.569486723196412,0,29.3817630132754,30.3797671629278,53.6249304098104,19.7897491705719,10.1995700056163,16.7307989407723,16.8941868536394,14.7848872742121,0.280888840263504,6.13549161281008,8.3131521472918,7.77347063922748,1.12674735821344,5.13305909657271,5.09610479413291,7.11066703153331,22.9480503471887,25.0826266820348,18.704404465547,6.62266502370548,11.6522047641227,1.92974780784272,2.25530924795977,8.52503339273995,6.6878494204257,5.27529241934179,1.88141931417128,2.13633205260448,8.40462890296871,2.74738778147832,3.5384422077995,0.808834249737046,1.76673214768315,0.969750506270444,1.86391761218122,0,0,8.68553987709211,9.34557971146178,10.1983464268879,14.7401463404755,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0,0.162241263067758,3.7680564624617,5.84712761867437,5.05445516867349,0.631325567659422,0,0,0.180062129805349,0.30140963567143,0.680364991513279,0.12811372028485,0.468508622798644,0.517406741478031,0,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0.61734640922383,0.398068533636986,7.72434506044558,6.43369767786788,9.37739548005456,2.69263504296152,1.40715635988658,1.08037236876609,0.473489471170421,0.983821158737019,0.617068451549513,0.930135779001631,1.07309360559848,2.10177616260905,1.81015834904829,0.32833492815819,0.243206428637567,0.438599962275997,0.878200461164203,0,0.210289948564127,0.102904612379284,17.1817767151575,8.46241813323342,0.426576501070468,1.16118335930219,1.03093969057675,0.80673409849337,0.667134131534611,1.33157938278791,4.2707615539006,1.4822905925161,1.50801125280162,3.58121649674071,1.55971269695296,4.49409704327111,2.59365659849633,2.98711909881551,0.948339504765408,0.456994050438915,1.1270773567308,0.203651327845314,0.581857461502877,1.19230893813542,0.758838445491087,0.590440591918409,1.255989822731,0.987177311374404,0.889357881261447,0.333690211432188,0,0.674586337154561,0.811440485554012,0,0.50925170356284,0.287696137450811,2.59416362840057,2.19649130550465,1.43768206527355,2.60498663367952,0.312037673114561,0.757736633841335,1.25578189465339,0.964887042726734,4.0645701836653,0.757965647081939,1.14075483509418,0.509235257325564,0.234690248288502,3.1826188913945,3.33261097240419,10.5372169843211,2.52216230569906,2.43611158613652,1.43509291791738,1.3109065177259,2.93564469172023,2.60368305446721,66.3481649332798,71.251644580251,0.983528546038072,1.10374698521893,0,0,0.327869890753351,0.504941854408746,3.47059041357882,4.29482618726302,4.30846795465598,8.84184552424442,16.0415045339324,18.1168979704853,10.9298889452221,9.9366991689846,11.0680577825027,0,4.68402281187286,0.35613120733451,1.46598263418218,3.46437258242324,0,1.45668381692989,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,5.68542244970086,2.18120237686503,3.56497378384721,1.26414703174326,1.05418608574999,4.12542172992747,0,0.18006109403131,0.129358683782755,0,0,0,0.493647061806363,0,12.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| ||
|EntrezGene=75909 | |||
|HGNC= | |||
|MCL_coexpression_id=1093 | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENSMUST00000150176_5end | |||
|description=CAGE_peak_4_at_Vmp1_5end | |||
|id=chr11:86400319..86400350,- | |||
|ontology_enrichment_celltype=CL:0000063!8.03e-12!66;CL:0000219!3.73e-11!54;CL:0000144!2.07e-10!121;CL:0000012!2.07e-10!121;CL:0002371!3.02e-09!118;CL:0000548!8.55e-09!115;CL:0000004!8.55e-09!115;CL:0000255!8.55e-09!115;CL:0002320!8.96e-08!46;CL:0000134!8.96e-08!46;CL:0000223!2.49e-07!20;CL:0000066!3.18e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.47e-12,54;CL:0002320,1.37e-08,46;CL:0000134,1.37e-08,46;CL:0000066,6.62e-08,25;CL:0000223,6.65e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.96e-08!46;UBERON:0002204!7.81e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.37e-08,46 | |||
|phase1_expression=0.160148847104794,4.53668029931169,6.3699893514535,7.25914107136392,2.50447864973174,2.68606835059024,4.20502753071946,3.61545305636414,4.08287294239834,1.40438715793196,5.82141091966717,3.43020283679947,0,0.174840804837995,2.33176833270964,3.23960427823721,3.49780939064073,1.10411757875383,0.822686601634433,0.84877930359606,2.04103896362567,3.17731043842833,8.61959304158487,10.3995074815714,13.9939661450974,8.03924749761028,9.04600191934057,5.817723282519,16.9120843316173,4.53654233567875,10.199603490144,3.81018404075779,4.30545351309199,0,4.04392267651784,4.15586613396231,1.42918549383658,1.67412652294763,4.6880120671428,3.66466620781659,9.99993529652724,2.73218193983378,2.42755176515577,55.6463935452052,57.1765892078062,101.134260441087,10.1710874765245,7.41285531693518,11.8630538676615,18.0819806139084,6.01941612989059,15.8127820801469,0.167782606057736,0,0.336093799142464,15.4355661621568,22.9226751951005,21.6582278756526,0,0,0,10.5041804941431,14.2287167377782,29.6966906702862,56.3653826663175,29.8401648277362,28.16241038873,6.53171119046643,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0.919218786610021,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0,0.294628585473668,0.569486723196412,0,29.3817630132754,30.3797671629278,53.6249304098104,19.7897491705719,10.1995700056163,16.7307989407723,16.8941868536394,14.7848872742121,0.280888840263504,6.13549161281008,8.3131521472918,7.77347063922748,1.12674735821344,5.13305909657271,5.09610479413291,7.11066703153331,22.9480503471887,25.0826266820348,18.704404465547,6.62266502370548,11.6522047641227,1.92974780784272,2.25530924795977,8.52503339273995,6.6878494204257,5.27529241934179,1.88141931417128,2.13633205260448,8.40462890296871,2.74738778147832,3.5384422077995,0.808834249737046,1.76673214768315,0.969750506270444,1.86391761218122,0,0,8.68553987709211,9.34557971146178,10.1983464268879,14.7401463404755,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0,0.162241263067758,3.7680564624617,5.84712761867437,5.05445516867349,0.631325567659422,0,0,0.180062129805349,0.30140963567143,0.680364991513279,0.12811372028485,0.468508622798644,0.517406741478031,0,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0.61734640922383,0.398068533636986,7.72434506044558,6.43369767786788,9.37739548005456,2.69263504296152,1.40715635988658,1.08037236876609,0.473489471170421,0.983821158737019,0.617068451549513,0.930135779001631,1.07309360559848,2.10177616260905,1.81015834904829,0.32833492815819,0.243206428637567,0.438599962275997,0.878200461164203,0,0.210289948564127,0.102904612379284,17.1817767151575,8.46241813323342,0.426576501070468,1.16118335930219,1.03093969057675,0.80673409849337,0.667134131534611,1.33157938278791,4.2707615539006,1.4822905925161,1.50801125280162,3.58121649674071,1.55971269695296,4.49409704327111,2.59365659849633,2.98711909881551,0.948339504765408,0.456994050438915,1.1270773567308,0.203651327845314,0.581857461502877,1.19230893813542,0.758838445491087,0.590440591918409,1.255989822731,0.987177311374404,0.889357881261447,0.333690211432188,0,0.674586337154561,0.811440485554012,0,0.50925170356284,0.287696137450811,2.59416362840057,2.19649130550465,1.43768206527355,2.60498663367952,0.312037673114561,0.757736633841335,1.25578189465339,0.964887042726734,4.0645701836653,0.757965647081939,1.14075483509418,0.509235257325564,0.234690248288502,3.1826188913945,3.33261097240419,10.5372169843211,2.52216230569906,2.43611158613652,1.43509291791738,1.3109065177259,2.93564469172023,2.60368305446721,66.3481649332798,71.251644580251,0.983528546038072,1.10374698521893,0,0,0.327869890753351,0.504941854408746,3.47059041357882,4.29482618726302,4.30846795465598,8.84184552424442,16.0415045339324,18.1168979704853,10.9298889452221,9.9366991689846,11.0680577825027,0,4.68402281187286,0.35613120733451,1.46598263418218,3.46437258242324,0,1.45668381692989,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,5.68542244970086,2.18120237686503,3.56497378384721,1.26414703174326,1.05418608574999,4.12542172992747,0,0.18006109403131,0.129358683782755,0,0,0,0.493647061806363,0,12.4376005273766,4.02480934641258,5.29268155331909,1.31909002353184,4.19807509409354,1.02531972377865,0.596861720015682,1.14898629821543,4.95517422270746,0,1.19609616558497,1.23832120777933,1.48155621895769,0.188368457004691,0.956859594047176,0.457556346413045,16.9978429993855,10.216456019627,15.0637971446822,10.5013767981662,0.158167996790568,1.01659733563424,3.45617090629764,4.18176592028937,6.11415178489297,8.22672512947406,7.3561575595549,6.80565449158477,9.20266310371729,1.86401793926078,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0.352071715937262,0.911430693907651,0.314578033277133,0.241584120826006,0,0.316011120628178,0.202725215290164,1.33524244314275,1.81889152168913,0.716106782669926,0,0.961563596159751,0.295379054349154,0.403865799792591,0.685861259894999,0.201652370273681,0.292373642219257,0.384847366561318,0.350630706544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| |||
|short_description=p4@Vmp1 | |||
}} | |||
Revision as of 21:18, 12 September 2013
| Short description: | p4@Vmp1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Vmp1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1093 |
| Association with transcript: | 32bp_to_ENSMUST00000150176_5end |
| EntrezGene: | Vmp1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 2.47e-12 | 54 |
| connective tissue cell | 1.37e-08 | 46 |
| mesenchymal cell | 1.37e-08 | 46 |
| epithelial cell | 6.62e-08 | 25 |
| endodermal cell | 6.65e-08 | 20 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 1.37e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
