FFCP PHASE1:Hg19::chr3:123603293..123603307,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4638|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7590|TSSclassifier=S|UniProt=|association_with_transcript=-115bp_to_ENST00000360772_5end|description=CAGE_peak_5_at_MYLK_5end|id=chr3:123603293..123603307,-|ontology_enrichment_celltype=CL:0000055!8.71e-21!180;CL:0000057!1.01e-12!75;CL:0000077!9.93e-08!19;CL:0002620!1.51e-07!23|ontology_enrichment_celltype_v019=CL:0000077;2.00e-09;19!CL:1000507;5.14e-09;10!CL:1000494;5.14e-09;10!CL:1000449;1.49e-08;15!CL:1000497;4.02e-08;17!CL:0002518;4.02e-08;17!CL:0002620;5.62e-08;23!CL:0002681;8.97e-07;12!CL:0002584;8.97e-07;12|ontology_enrichment_celltype_v019_2=CL:0000057,2.04e-12,76;CL:0000077,1.33e-09,19;CL:1000507,7.58e-09,10;CL:1000494,7.58e-09,10;CL:1000449,2.16e-08,15;CL:1000497,4.65e-08,17;CL:0002518,4.65e-08,17;CL:0002620,5.76e-08,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.17e-13!365;UBERON:0005256!4.86e-10!143;UBERON:0002100!3.93e-08!216;UBERON:0003064!1.94e-07!37;UBERON:0004876!3.38e-07!20|ontology_enrichment_uberon_v019=UBERON:0004211;5.14e-09;10!UBERON:0009773;5.14e-09;10!UBERON:0001231;5.14e-09;10!UBERON:0004810;5.14e-09;10!UBERON:0006555;1.49e-08;15!UBERON:0004819;1.49e-08;15!UBERON:0001285;1.49e-08;15!UBERON:0007684;1.49e-08;15!UBERON:0001225;8.97e-07;12!UBERON:0008987;8.97e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0004810,7.58e-09,10;UBERON:0004211,2.16e-08,15;UBERON:0009773,2.16e-08,15;UBERON:0001231,2.16e-08,15;UBERON:0001285,2.16e-08,15;UBERON:0007684,2.16e-08,15;UBERON:0004208,2.16e-08,15;UBERON:0006555,1.26e-07,16;UBERON:0004819,1.26e-07,16|phase1_expression=2.18014055124668,6.63711624062048,4.51054093107108,8.00586386825043,11.6209884551095,1.74467704820074,25.3299878168311,0,0,0.245733936501509,0,1.09220686065086,1.58260186937072,1.23766352960047,1.98838425436749,2.01697543935533,1.20538905604795,2.19093027116212,1.46379839637152,3.32426856807327,7.75202626728161,3.44800193625897,4.00730381983479,7.25434452886286,4.77062030460251,0,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,8.02140657017423,6.66293987219789,1.5905718941022,0.973269740605272,3.21418378357831,4.87804674417641,3.77689578480442,1.44076983047484,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,1.72131935057184,0.860509862246441,1.41867352879343,0.560677600142307,4.2699598291882,1.48000529050296,0.622422070799533,0,0,0.605429710579726,0.576175924479999,0.234321431833797,0.624320153660641,0,0,0.469737994575059,0.485618833104395,0.280901613404497,0.408308342509787,1.10550885580591,0.206651562351531,9.50402285825643,7.41800787835671,0,0.718618141816238,0.168336113954066,0.250237039743928,1.38532057742091,16.6811495934718,9.19463387397059,7.81237906314303,0,36.0573167734613,12.1727711626583,4.4505699243508,11.4034616512073,7.11062451745228,80.6414890342819,26.4285935990858,5.40084263172052,2.24105111870757,55.7878641079493,25.9580714171284,0.323292113637624,47.2162758047097,10.2767140192193,15.7691350848753,0,0,0,0.975789649036763,0.397589304964456,0.813357600086629,1.24393266018445,0.504641701751257,0.72995471815166,6.25798129319264,7.71889125831462,4.14404764057442,0.928735856063958,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0,0,2.80483547606892,1.2347220339942,1.47008711385542,0,0.982827216677626,0,0,0.122988438543114,0.857839051492628,0.109750285408626,0,0,0,0,0,1.44331342025273,2.20267769452646,1.99594780200897,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0.308482478109971,0,0,0.448524337381443,0.87192013766656,0.1466765716419,4.00742318849111,0,0,10.6375246633948,24.9617848587279,0.257207374262142,1.41849132023278,1.3321108950805,1.28680194292333,0,0,0,1.77695974371273,0,7.53598442648965,13.9445353376047,25.3931397602425,0,0,0,0,0,1.42636905040718,1.01346914667305,0.410952645100767,2.14873155887875,0,0,0,0,3.30323011489202,0,0,0,0,0,0,0,0.12269149171914,0,1.62759014219841,4.57535895367776,14.0958901149758,4.57337003598411,16.9855051739434,2.40756879782175,2.27407504055985,1.03473071292505,1.32845119707087,2.39679919104214,11.2948698808508,0.587403472388222,0.343143423810856,0,0,0,0.606255142892519,0,1.81434175997808,2.72918588600655,18.7223607411436,7.57782254969299,3.45975702990393,4.09365799253363,5.62988724002626,1.48418066444991,1.3878872442239,0,0.246381468041427,1.55776328755086,0.348631135379878,0.120859449591622,0,0,5.39627906373652,8.92246723232913,16.1283030400092,4.0607965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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7590 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-115bp_to_ENST00000360772_5end | |||
|description=CAGE_peak_5_at_MYLK_5end | |||
|id=chr3:123603293..123603307,- | |||
|ontology_enrichment_celltype=CL:0000055!8.71e-21!180;CL:0000057!1.01e-12!75;CL:0000077!9.93e-08!19;CL:0002620!1.51e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.00e-09;19!CL:1000507;5.14e-09;10!CL:1000494;5.14e-09;10!CL:1000449;1.49e-08;15!CL:1000497;4.02e-08;17!CL:0002518;4.02e-08;17!CL:0002620;5.62e-08;23!CL:0002681;8.97e-07;12!CL:0002584;8.97e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.04e-12,76;CL:0000077,1.33e-09,19;CL:1000507,7.58e-09,10;CL:1000494,7.58e-09,10;CL:1000449,2.16e-08,15;CL:1000497,4.65e-08,17;CL:0002518,4.65e-08,17;CL:0002620,5.76e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.17e-13!365;UBERON:0005256!4.86e-10!143;UBERON:0002100!3.93e-08!216;UBERON:0003064!1.94e-07!37;UBERON:0004876!3.38e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.14e-09;10!UBERON:0009773;5.14e-09;10!UBERON:0001231;5.14e-09;10!UBERON:0004810;5.14e-09;10!UBERON:0006555;1.49e-08;15!UBERON:0004819;1.49e-08;15!UBERON:0001285;1.49e-08;15!UBERON:0007684;1.49e-08;15!UBERON:0001225;8.97e-07;12!UBERON:0008987;8.97e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,7.58e-09,10;UBERON:0004211,2.16e-08,15;UBERON:0009773,2.16e-08,15;UBERON:0001231,2.16e-08,15;UBERON:0001285,2.16e-08,15;UBERON:0007684,2.16e-08,15;UBERON:0004208,2.16e-08,15;UBERON:0006555,1.26e-07,16;UBERON:0004819,1.26e-07,16 | |||
|phase1_expression=2.18014055124668,6.63711624062048,4.51054093107108,8.00586386825043,11.6209884551095,1.74467704820074,25.3299878168311,0,0,0.245733936501509,0,1.09220686065086,1.58260186937072,1.23766352960047,1.98838425436749,2.01697543935533,1.20538905604795,2.19093027116212,1.46379839637152,3.32426856807327,7.75202626728161,3.44800193625897,4.00730381983479,7.25434452886286,4.77062030460251,0,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,8.02140657017423,6.66293987219789,1.5905718941022,0.973269740605272,3.21418378357831,4.87804674417641,3.77689578480442,1.44076983047484,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,1.72131935057184,0.860509862246441,1.41867352879343,0.560677600142307,4.2699598291882,1.48000529050296,0.622422070799533,0,0,0.605429710579726,0.576175924479999,0.234321431833797,0.624320153660641,0,0,0.469737994575059,0.485618833104395,0.280901613404497,0.408308342509787,1.10550885580591,0.206651562351531,9.50402285825643,7.41800787835671,0,0.718618141816238,0.168336113954066,0.250237039743928,1.38532057742091,16.6811495934718,9.19463387397059,7.81237906314303,0,36.0573167734613,12.1727711626583,4.4505699243508,11.4034616512073,7.11062451745228,80.6414890342819,26.4285935990858,5.40084263172052,2.24105111870757,55.7878641079493,25.9580714171284,0.323292113637624,47.2162758047097,10.2767140192193,15.7691350848753,0,0,0,0.975789649036763,0.397589304964456,0.813357600086629,1.24393266018445,0.504641701751257,0.72995471815166,6.25798129319264,7.71889125831462,4.14404764057442,0.928735856063958,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0,0,2.80483547606892,1.2347220339942,1.47008711385542,0,0.982827216677626,0,0,0.122988438543114,0.857839051492628,0.109750285408626,0,0,0,0,0,1.44331342025273,2.20267769452646,1.99594780200897,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0.308482478109971,0,0,0.448524337381443,0.87192013766656,0.1466765716419,4.00742318849111,0,0,10.6375246633948,24.9617848587279,0.257207374262142,1.41849132023278,1.3321108950805,1.28680194292333,0,0,0,1.77695974371273,0,7.53598442648965,13.9445353376047,25.3931397602425,0,0,0,0,0,1.42636905040718,1.01346914667305,0.410952645100767,2.14873155887875,0,0,0,0,3.30323011489202,0,0,0,0,0,0,0,0.12269149171914,0,1.62759014219841,4.57535895367776,14.0958901149758,4.57337003598411,16.9855051739434,2.40756879782175,2.27407504055985,1.03473071292505,1.32845119707087,2.39679919104214,11.2948698808508,0.587403472388222,0.343143423810856,0,0,0,0.606255142892519,0,1.81434175997808,2.72918588600655,18.7223607411436,7.57782254969299,3.45975702990393,4.09365799253363,5.62988724002626,1.48418066444991,1.3878872442239,0,0.246381468041427,1.55776328755086,0.348631135379878,0.120859449591622,0,0,5.39627906373652,8.92246723232913,16.1283030400092,4.06079651616671,1.00119938235739,21.9617935369519,2.92278449306521,1.37217117560738,1.13733384070897,0,10.795795805107,1.54227252690289,6.77366093859632,12.5422443463713,10.4499271948466,13.2972161428596,50.3718198124901,0,0,2.3080511260475,10.4964686623906,1.30151357865721,0.9273691048295,7.69183504474085,9.48859249086762,0,0,4.82051789532479,0.193341436584244,0.308097234229289,0.15350367472613,0.137836572484531,0.322260734604821,0.870100163485371,0.426133137080504,0.890320356467374,0,0.192190067365106,0.255225424989168,0,0,1.5740617341532,0,0,0.532306030317022,0.869932992075073,0.9266210955196,0,1.48863347743867,0.632758849437452,7.05331717518152,4.09436466098134,6.41908482050881,0,0,7.01502584574927,2.74537029736055,1.88499843753098,0.404364963146632,0,0.842516912477962,3.90106991271672,0,0,15.2879900776944,6.92886616573193,2.26016233240486,0,0.66343897524122,0,2.89387767133344,5.9030527684197,0,0.6196469961995,1.40847801266121,0.573645408816206,0.294747123039363,0.35667105148125,0.709522128141196,0.633322905892992,2.30506425071931,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,1.11481905075431,2.16403819464667,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0.779160935160341,0,1.26675244876796,15.3420950953324,0.276283915531148,0,3.1703291575668,0,4.3545542272653,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,3.33410970433911,0,0.185536196323703,3.99227596002388,0.260427761085233,0,2.17499872630438,0,0,1.41832609060762,0,0,0.347249989866585,1.77148277162768,0,0,0.110579259931225,0,0.658156191461918,1.52513848926586,0,0.769502585037971,0.91153644677601,0.922255617552241,0.3590305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| |||
|short_description=p5@MYLK | |||
}} |
Revision as of 21:14, 12 September 2013
Short description: | p5@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MYLK_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_ENST00000360772_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.04e-12 | 76 |
mesothelial cell | 1.33e-09 | 19 |
kidney tubule cell | 7.58e-09 | 10 |
nephron tubule epithelial cell | 7.58e-09 | 10 |
epithelial cell of nephron | 2.16e-08 | 15 |
kidney cell | 4.65e-08 | 17 |
kidney epithelial cell | 4.65e-08 | 17 |
skin fibroblast | 5.76e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 7.58e-09 | 10 |
nephron epithelium | 2.16e-08 | 15 |
renal tubule | 2.16e-08 | 15 |
nephron tubule | 2.16e-08 | 15 |
nephron | 2.16e-08 | 15 |
uriniferous tubule | 2.16e-08 | 15 |
nephrogenic mesenchyme | 2.16e-08 | 15 |
excretory tube | 1.26e-07 | 16 |
kidney epithelium | 1.26e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.