FFCP PHASE1:Hg19::chr3:123419392..123419434,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4638|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=7590|TSSclassifier=S|UniProt=|association_with_transcript=159bp_to_BC034911_5end|description=CAGE_peak_32_at_MYLK_5end|id=chr3:123419392..123419434,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;6.73e-09;3!CL:1000428;6.73e-09;3!CL:0000222;2.74e-07;1|ontology_enrichment_celltype_v019_2=CL:0000346,4.88e-09,3;CL:1000428,4.88e-09,3|ontology_enrichment_development_v019=UBERON:0007297;1.65e-13;2!UBERON:0005754;6.58e-08;1!UBERON:0009143;7.74e-08;1!UBERON:0004874;1.14e-07;1!UBERON:0006242;2.74e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;5.24e-19;3!DOID:127;5.24e-19;3!DOID:0060072;2.13e-14;4|ontology_enrichment_disease_v019_2=DOID:0060084,2.29e-19,3;DOID:127,2.29e-19,3;DOID:0060072,1.15e-14,4|ontology_enrichment_uberon=UBERON:0007023!3.28e-15!115;UBERON:0000062!1.30e-07!511;UBERON:0004457!4.28e-07!12;UBERON:0000042!4.28e-07!12;UBERON:0004923!5.66e-07!57|ontology_enrichment_uberon_v019=UBERON:0006947;1.89e-19;3!UBERON:0004054;1.89e-19;3!UBERON:0005904;9.96e-15;4!UBERON:0003135;5.58e-14;11!UBERON:0004175;1.19e-13;21!UBERON:0003101;6.10e-13;22!UBERON:0000079;6.10e-13;22!UBERON:0003133;1.32e-09;44!UBERON:0000412;6.73e-09;3!UBERON:0001992;6.73e-09;3!UBERON:0005156;3.08e-08;59!UBERON:0000990;3.08e-08;59!UBERON:0000998;6.58e-08;1!UBERON:0006868;6.58e-08;1!UBERON:0001000;1.14e-07;1!UBERON:0000989;1.14e-07;1!UBERON:0008811;1.14e-07;1!UBERON:0005352;1.14e-07;1!UBERON:0001301;2.74e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.57e-19,3;UBERON:0004054,1.57e-19,3;UBERON:0005904,8.69e-15,4;UBERON:0003135,5.60e-14,11;UBERON:0003101,6.71e-13,22;UBERON:0000079,6.71e-13,22;UBERON:0005156,1.08e-12,59;UBERON:0000990,1.08e-12,59;UBERON:0004175,1.98e-11,25;UBERON:0003133,4.17e-11,48;UBERON:0000412,4.88e-09,3;UBERON:0001992,4.88e-09,3;UBERON:0000998,6.59e-08,1;UBERON:0006868,6.59e-08,1;UBERON:0007023,8.34e-08,114;UBERON:0000989,9.71e-08,1;UBERON:0008811,9.71e-08,1;UBERON:0006258,9.71e-08,1;UBERON:0005876,9.71e-08,1;UBERON:0004874,9.71e-08,1;UBERON:0001000,1.03e-07,1;UBERON:0005352,1.03e-07,1;UBERON:0003064,1.78e-07,28;UBERON:0001301,2.50e-07,1|phase1_expression=0.54503513781167,0.642301571672949,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.368502951935304,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.368199594569197,0,0.355009592516614,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,1.32969058292435,2.08014873822732,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0.535286966391485,0.315404830067869,0,0,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.384417447767103,1.53512174720011,0.804269605718038,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0.728364672026868,2.22911505431021,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0,0,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0.682499557039929,0.707027159768564,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.7133421029625,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0,0,0,0,3.18796781201712,0.828851746593443,0,0.20453736500431,0,0.622079175323615,0,0,0,2.36744173528641,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,2.15460723810632,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0.995261931078505,2.0345239835768,1.83309043480088,0,0,0,0.337005664903385,0,0,0,0,0,2.36750641709634,0,0,0.189559738885464,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7590 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=159bp_to_BC034911_5end | |||
|description=CAGE_peak_32_at_MYLK_5end | |||
|id=chr3:123419392..123419434,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;6.73e-09;3!CL:1000428;6.73e-09;3!CL:0000222;2.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,4.88e-09,3;CL:1000428,4.88e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.65e-13;2!UBERON:0005754;6.58e-08;1!UBERON:0009143;7.74e-08;1!UBERON:0004874;1.14e-07;1!UBERON:0006242;2.74e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.24e-19;3!DOID:127;5.24e-19;3!DOID:0060072;2.13e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.29e-19,3;DOID:127,2.29e-19,3;DOID:0060072,1.15e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.28e-15!115;UBERON:0000062!1.30e-07!511;UBERON:0004457!4.28e-07!12;UBERON:0000042!4.28e-07!12;UBERON:0004923!5.66e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.89e-19;3!UBERON:0004054;1.89e-19;3!UBERON:0005904;9.96e-15;4!UBERON:0003135;5.58e-14;11!UBERON:0004175;1.19e-13;21!UBERON:0003101;6.10e-13;22!UBERON:0000079;6.10e-13;22!UBERON:0003133;1.32e-09;44!UBERON:0000412;6.73e-09;3!UBERON:0001992;6.73e-09;3!UBERON:0005156;3.08e-08;59!UBERON:0000990;3.08e-08;59!UBERON:0000998;6.58e-08;1!UBERON:0006868;6.58e-08;1!UBERON:0001000;1.14e-07;1!UBERON:0000989;1.14e-07;1!UBERON:0008811;1.14e-07;1!UBERON:0005352;1.14e-07;1!UBERON:0001301;2.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.57e-19,3;UBERON:0004054,1.57e-19,3;UBERON:0005904,8.69e-15,4;UBERON:0003135,5.60e-14,11;UBERON:0003101,6.71e-13,22;UBERON:0000079,6.71e-13,22;UBERON:0005156,1.08e-12,59;UBERON:0000990,1.08e-12,59;UBERON:0004175,1.98e-11,25;UBERON:0003133,4.17e-11,48;UBERON:0000412,4.88e-09,3;UBERON:0001992,4.88e-09,3;UBERON:0000998,6.59e-08,1;UBERON:0006868,6.59e-08,1;UBERON:0007023,8.34e-08,114;UBERON:0000989,9.71e-08,1;UBERON:0008811,9.71e-08,1;UBERON:0006258,9.71e-08,1;UBERON:0005876,9.71e-08,1;UBERON:0004874,9.71e-08,1;UBERON:0001000,1.03e-07,1;UBERON:0005352,1.03e-07,1;UBERON:0003064,1.78e-07,28;UBERON:0001301,2.50e-07,1 | |||
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|short_description=p32@MYLK | |||
}} |
Revision as of 21:13, 12 September 2013
Short description: | p32@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_32_at_MYLK_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_BC034911_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 4.88e-09 | 3 |
stem cell of epidermis | 4.88e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.57e-19 | 3 |
internal male genitalia | 1.57e-19 | 3 |
duct of male reproductive system | 8.69e-15 | 4 |
male reproductive organ | 5.60e-14 | 11 |
male organism | 6.71e-13 | 22 |
male reproductive system | 6.71e-13 | 22 |
reproductive structure | 1.08e-12 | 59 |
reproductive system | 1.08e-12 | 59 |
internal genitalia | 1.98e-11 | 25 |
reproductive organ | 4.17e-11 | 48 |
dermal papilla | 4.88e-09 | 3 |
papillary layer of dermis | 4.88e-09 | 3 |
seminal vesicle | 6.59e-08 | 1 |
seminal fluid secreting gland | 6.59e-08 | 1 |
adult organism | 8.34e-08 | 114 |
penis | 9.71e-08 | 1 |
intromittent organ | 9.71e-08 | 1 |
lateral plate mesenchyme | 9.71e-08 | 1 |
undifferentiated genital tubercle | 9.71e-08 | 1 |
somatopleure | 9.71e-08 | 1 |
vas deferens | 1.03e-07 | 1 |
spermatic cord | 1.03e-07 | 1 |
intermediate mesoderm | 1.78e-07 | 28 |
epididymis | 2.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.29e-19 | 3 |
leiomyoma | 2.29e-19 | 3 |
benign neoplasm | 1.15e-14 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.