FFCP PHASE1:Mm9::chr11:82930290..82930299,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20555|HGNC=|MCL_coexpression_id=36|UniProt=Q9Z0I7|association_with_transcript=-47bp_to_NM_011407,uc007koi.1_5end|description=CAGE_peak_5_at_Slfn1_5end|id=chr11:82930290..82930299,+|ontology_enrichment_celltype=CL:0000791!4.65e-16!9;CL:0000789!4.65e-16!9;CL:0002420!4.65e-16!9;CL:0002419!4.65e-16!9;CL:0000790!4.65e-16!9;CL:0000624!1.94e-14!8;CL:0000084!9.74e-13!11;CL:0000827!9.74e-13!11;CL:0000838!1.70e-11!12;CL:0000893!2.58e-11!6;CL:0002489!2.58e-11!6;CL:0000898!2.58e-11!6;CL:0000809!2.58e-11!6;CL:0000810!2.58e-11!6;CL:0000895!2.58e-11!6;CL:0000808!2.58e-11!6;CL:0000894!2.58e-11!6;CL:0000806!2.58e-11!6;CL:0000807!2.58e-11!6;CL:0000805!2.58e-11!6;CL:0002425!2.58e-11!6;CL:0002436!2.58e-11!6;CL:0002427!2.58e-11!6;CL:0002428!2.58e-11!6;CL:0002429!2.58e-11!6;CL:0002433!2.58e-11!6;CL:0002431!2.58e-11!6;CL:0002432!2.58e-11!6;CL:0000542!1.91e-10!13;CL:0000051!1.91e-10!13;CL:0002031!9.24e-10!25;CL:0000738!1.70e-07!17;CL:0002087!1.70e-07!17;CL:0000988!6.57e-07!32;CL:0002032!6.57e-07!32;CL:0000037!6.57e-07!32;CL:0000566!6.57e-07!32;CL:0000837!6.57e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,7.96e-23,9;CL:0000789,7.96e-23,9;CL:0002420,7.96e-23,9;CL:0002419,7.96e-23,9;CL:0000790,7.96e-23,9;CL:0000084,1.23e-18,11;CL:0000827,1.23e-18,11;CL:0000624,3.65e-18,8;CL:0000838,4.61e-17,12;CL:0000893,8.73e-16,6;CL:0002489,8.73e-16,6;CL:0000898,8.73e-16,6;CL:0000809,8.73e-16,6;CL:0000810,8.73e-16,6;CL:0000895,8.73e-16,6;CL:0000808,8.73e-16,6;CL:0000894,8.73e-16,6;CL:0000806,8.73e-16,6;CL:0000807,8.73e-16,6;CL:0000805,8.73e-16,6;CL:0002425,8.73e-16,6;CL:0002436,8.73e-16,6;CL:0002427,8.73e-16,6;CL:0002428,8.73e-16,6;CL:0002429,8.73e-16,6;CL:0002433,8.73e-16,6;CL:0002431,8.73e-16,6;CL:0002432,8.73e-16,6;CL:0000542,9.92e-16,13;CL:0000051,9.92e-16,13;CL:0002031,5.41e-14,25;CL:0000738,5.83e-12,17;CL:0002087,5.83e-12,17;CL:0000988,9.24e-11,32;CL:0002032,9.24e-11,32;CL:0000037,9.24e-11,32;CL:0000837,9.24e-11,32;CL:0002320,3.12e-07,46;CL:0000134,3.12e-07,46;CL:0000815,3.67e-07,1;CL:0000792,3.67e-07,1;CL:0000625,6.32e-07,1;CL:0000355,8.81e-07,9|ontology_enrichment_disease=DOID:0060100!5.64e-07!3;DOID:4045!5.64e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.59e-19,3;DOID:4045,2.59e-19,3;DOID:0050686,6.12e-10,6|ontology_enrichment_uberon=UBERON:0004177!3.56e-17!29;UBERON:0002193!4.15e-15!48;UBERON:0002390!7.68e-15!45;UBERON:0003061!7.68e-15!45;UBERON:0000065!6.03e-13!41;UBERON:0001004!1.67e-12!42;UBERON:0002370!4.38e-12!23;UBERON:0000974!4.38e-12!23;UBERON:0004807!4.38e-12!23;UBERON:0005058!4.38e-12!23;UBERON:0003351!4.38e-12!23;UBERON:0009113!4.38e-12!23;UBERON:0003295!4.38e-12!23;UBERON:0009722!4.38e-12!23;UBERON:0005562!4.38e-12!23;UBERON:0007690!4.38e-12!23;UBERON:0006562!1.99e-11!24;UBERON:0003408!1.99e-11!24;UBERON:0001557!1.99e-11!24;UBERON:0001042!1.99e-11!24;UBERON:0008814!1.99e-11!24;UBERON:0009145!1.99e-11!24;UBERON:0000072!9.34e-10!27;UBERON:0002405!3.09e-09!70;UBERON:0005057!1.47e-08!51;UBERON:0003081!2.11e-07!88;UBERON:0000063!9.74e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.12e-07,46;UBERON:0000029,4.21e-07,1;UBERON:0001097,4.21e-07,1;UBERON:0003968,4.21e-07,1;UBERON:0001467,4.21e-07,1;UBERON:0001134,8.81e-07,9;UBERON:0002036,8.81e-07,9;UBERON:0002385,8.81e-07,9;UBERON:0000486,8.81e-07,9;UBERON:0007503,8.81e-07,9;UBERON:0001015,8.81e-07,9;UBERON:0002329,8.81e-07,9;UBERON:0003082,8.81e-07,9;UBERON:0003059,8.81e-07,9;UBERON:0007282,8.81e-07,9;UBERON:0004290,8.81e-07,9;UBERON:0009618,8.81e-07,9|phase1_expression=0,0,0,0,0,0,0,7.10178278928669,1.12630977721333,0.936258105287974,0.856089841127525,1.11681022593471,12.497653284978,9.44140346125172,0.333109761815663,0,0,1.57731082679119,0.685572168028694,1.69755860719212,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,11.3003540298965,11.720030167857,17.2762835511353,10.5881667845583,10.9287277593351,9.71020706062307,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.36619248741323,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0.555583582109135,0.188368457004691,0.683471138605126,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.443068581523732,0.605798699688886,0.381034033274999,0.504130925684203,0.779663045918019,0.769694733122636,0.818138315270983,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p5@Slfn1}} | ||
|EntrezGene=20555 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=Q9Z0I7 | |||
|association_with_transcript=-47bp_to_NM_011407,uc007koi.1_5end | |||
|description=CAGE_peak_5_at_Slfn1_5end | |||
|id=chr11:82930290..82930299,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.65e-16!9;CL:0000789!4.65e-16!9;CL:0002420!4.65e-16!9;CL:0002419!4.65e-16!9;CL:0000790!4.65e-16!9;CL:0000624!1.94e-14!8;CL:0000084!9.74e-13!11;CL:0000827!9.74e-13!11;CL:0000838!1.70e-11!12;CL:0000893!2.58e-11!6;CL:0002489!2.58e-11!6;CL:0000898!2.58e-11!6;CL:0000809!2.58e-11!6;CL:0000810!2.58e-11!6;CL:0000895!2.58e-11!6;CL:0000808!2.58e-11!6;CL:0000894!2.58e-11!6;CL:0000806!2.58e-11!6;CL:0000807!2.58e-11!6;CL:0000805!2.58e-11!6;CL:0002425!2.58e-11!6;CL:0002436!2.58e-11!6;CL:0002427!2.58e-11!6;CL:0002428!2.58e-11!6;CL:0002429!2.58e-11!6;CL:0002433!2.58e-11!6;CL:0002431!2.58e-11!6;CL:0002432!2.58e-11!6;CL:0000542!1.91e-10!13;CL:0000051!1.91e-10!13;CL:0002031!9.24e-10!25;CL:0000738!1.70e-07!17;CL:0002087!1.70e-07!17;CL:0000988!6.57e-07!32;CL:0002032!6.57e-07!32;CL:0000037!6.57e-07!32;CL:0000566!6.57e-07!32;CL:0000837!6.57e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.96e-23,9;CL:0000789,7.96e-23,9;CL:0002420,7.96e-23,9;CL:0002419,7.96e-23,9;CL:0000790,7.96e-23,9;CL:0000084,1.23e-18,11;CL:0000827,1.23e-18,11;CL:0000624,3.65e-18,8;CL:0000838,4.61e-17,12;CL:0000893,8.73e-16,6;CL:0002489,8.73e-16,6;CL:0000898,8.73e-16,6;CL:0000809,8.73e-16,6;CL:0000810,8.73e-16,6;CL:0000895,8.73e-16,6;CL:0000808,8.73e-16,6;CL:0000894,8.73e-16,6;CL:0000806,8.73e-16,6;CL:0000807,8.73e-16,6;CL:0000805,8.73e-16,6;CL:0002425,8.73e-16,6;CL:0002436,8.73e-16,6;CL:0002427,8.73e-16,6;CL:0002428,8.73e-16,6;CL:0002429,8.73e-16,6;CL:0002433,8.73e-16,6;CL:0002431,8.73e-16,6;CL:0002432,8.73e-16,6;CL:0000542,9.92e-16,13;CL:0000051,9.92e-16,13;CL:0002031,5.41e-14,25;CL:0000738,5.83e-12,17;CL:0002087,5.83e-12,17;CL:0000988,9.24e-11,32;CL:0002032,9.24e-11,32;CL:0000037,9.24e-11,32;CL:0000837,9.24e-11,32;CL:0002320,3.12e-07,46;CL:0000134,3.12e-07,46;CL:0000815,3.67e-07,1;CL:0000792,3.67e-07,1;CL:0000625,6.32e-07,1;CL:0000355,8.81e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!5.64e-07!3;DOID:4045!5.64e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.59e-19,3;DOID:4045,2.59e-19,3;DOID:0050686,6.12e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.56e-17!29;UBERON:0002193!4.15e-15!48;UBERON:0002390!7.68e-15!45;UBERON:0003061!7.68e-15!45;UBERON:0000065!6.03e-13!41;UBERON:0001004!1.67e-12!42;UBERON:0002370!4.38e-12!23;UBERON:0000974!4.38e-12!23;UBERON:0004807!4.38e-12!23;UBERON:0005058!4.38e-12!23;UBERON:0003351!4.38e-12!23;UBERON:0009113!4.38e-12!23;UBERON:0003295!4.38e-12!23;UBERON:0009722!4.38e-12!23;UBERON:0005562!4.38e-12!23;UBERON:0007690!4.38e-12!23;UBERON:0006562!1.99e-11!24;UBERON:0003408!1.99e-11!24;UBERON:0001557!1.99e-11!24;UBERON:0001042!1.99e-11!24;UBERON:0008814!1.99e-11!24;UBERON:0009145!1.99e-11!24;UBERON:0000072!9.34e-10!27;UBERON:0002405!3.09e-09!70;UBERON:0005057!1.47e-08!51;UBERON:0003081!2.11e-07!88;UBERON:0000063!9.74e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.12e-07,46;UBERON:0000029,4.21e-07,1;UBERON:0001097,4.21e-07,1;UBERON:0003968,4.21e-07,1;UBERON:0001467,4.21e-07,1;UBERON:0001134,8.81e-07,9;UBERON:0002036,8.81e-07,9;UBERON:0002385,8.81e-07,9;UBERON:0000486,8.81e-07,9;UBERON:0007503,8.81e-07,9;UBERON:0001015,8.81e-07,9;UBERON:0002329,8.81e-07,9;UBERON:0003082,8.81e-07,9;UBERON:0003059,8.81e-07,9;UBERON:0007282,8.81e-07,9;UBERON:0004290,8.81e-07,9;UBERON:0009618,8.81e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,7.10178278928669,1.12630977721333,0.936258105287974,0.856089841127525,1.11681022593471,12.497653284978,9.44140346125172,0.333109761815663,0,0,1.57731082679119,0.685572168028694,1.69755860719212,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,11.3003540298965,11.720030167857,17.2762835511353,10.5881667845583,10.9287277593351,9.71020706062307,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.36619248741323,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0.555583582109135,0.188368457004691,0.683471138605126,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.443068581523732,0.605798699688886,0.381034033274999,0.504130925684203,0.779663045918019,0.769694733122636,0.818138315270983,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@Slfn1 | |||
}} |
Revision as of 21:10, 12 September 2013
Short description: | p5@Slfn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slfn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -47bp_to_NM_011407, uc007koi.1_5end |
EntrezGene: | Slfn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.12e-07 | 46 |
lymph node | 4.21e-07 | 1 |
axillary lymph node | 4.21e-07 | 1 |
peripheral lymph node | 4.21e-07 | 1 |
shoulder | 4.21e-07 | 1 |
skeletal muscle tissue | 8.81e-07 | 9 |
striated muscle tissue | 8.81e-07 | 9 |
muscle tissue | 8.81e-07 | 9 |
multilaminar epithelium | 8.81e-07 | 9 |
epithelial vesicle | 8.81e-07 | 9 |
musculature | 8.81e-07 | 9 |
somite | 8.81e-07 | 9 |
myotome | 8.81e-07 | 9 |
presomitic mesoderm | 8.81e-07 | 9 |
presumptive segmental plate | 8.81e-07 | 9 |
dermomyotome | 8.81e-07 | 9 |
trunk paraxial mesoderm | 8.81e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.59e-19 | 3 |
muscle cancer | 2.59e-19 | 3 |
organ system cancer | 6.12e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.