FFCP PHASE1:Mm9::chr11:81681200..81681211,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:81681200..81681211,-|id=chr11:81681200..81681211,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!2.27e-20!10;UBERON:0000411!2.27e-20!10;UBERON:0001950!2.27e-20!10;UBERON:0000033!1.54e-17!63;UBERON:0002346!2.17e-17!71;UBERON:0003075!2.17e-17!71;UBERON:0007284!2.17e-17!71;UBERON:0003056!1.16e-15!49;UBERON:0001017!2.08e-15!73;UBERON:0005743!2.08e-15!73;UBERON:0002619!2.30e-15!17;UBERON:0000955!2.38e-15!50;UBERON:0006238!2.38e-15!50;UBERON:0000073!8.62e-15!75;UBERON:0001016!8.62e-15!75;UBERON:0001049!1.96e-14!52;UBERON:0005068!1.96e-14!52;UBERON:0006241!1.96e-14!52;UBERON:0007135!1.96e-14!52;UBERON:0002616!3.73e-14!49;UBERON:0000956!5.79e-14!21;UBERON:0001869!5.79e-14!21;UBERON:0000203!5.79e-14!21;UBERON:0004121!8.74e-14!102;UBERON:0000924!8.74e-14!102;UBERON:0006601!8.74e-14!102;UBERON:0002020!7.47e-13!34;UBERON:0002791!2.93e-12!29;UBERON:0003528!2.93e-12!29;UBERON:0001893!2.93e-12!29;UBERON:0003080!5.70e-12!40;UBERON:0007811!7.30e-11!86;UBERON:0002780!7.60e-11!39;UBERON:0001890!7.60e-11!39;UBERON:0006240!7.60e-11!39;UBERON:0000153!3.24e-10!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.45e-50,10;UBERON:0000411,9.45e-50,10;UBERON:0001950,9.45e-50,10;UBERON:0002619,9.55e-29,17;UBERON:0000956,5.11e-23,21;UBERON:0001869,5.11e-23,21;UBERON:0000203,5.11e-23,21;UBERON:0003056,7.38e-21,49;UBERON:0003528,1.27e-19,29;UBERON:0002791,1.27e-19,29;UBERON:0001893,1.27e-19,29;UBERON:0003080,2.05e-19,40;UBERON:0000955,6.11e-19,47;UBERON:0006238,6.11e-19,47;UBERON:0002346,8.78e-18,64;UBERON:0003075,8.78e-18,64;UBERON:0007284,8.78e-18,64;UBERON:0002780,5.53e-17,39;UBERON:0001890,5.53e-17,39;UBERON:0006240,5.53e-17,39;UBERON:0001049,6.16e-17,52;UBERON:0005068,6.16e-17,52;UBERON:0006241,6.16e-17,52;UBERON:0007135,6.16e-17,52;UBERON:0002616,1.24e-16,46;UBERON:0002020,1.66e-16,34;UBERON:0010371,2.58e-15,73;UBERON:0000073,6.96e-14,54;UBERON:0001017,2.54e-13,73;UBERON:0001016,6.60e-13,75;UBERON:0004121,6.75e-13,95;UBERON:0000924,6.75e-13,95;UBERON:0006601,6.75e-13,95;UBERON:0010314,1.12e-11,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.307213066512487,0,0.0914876436024097,0,0,0,0,0.883885756421003,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,1.37250180845588,0,0.695297280769106,1.27857728665165,0.41557608911912,2.43361894601636,0,0,0,0,0.130120442962704,0,0,0,0.272145996605311,1.15302348256365,0.468508622798644,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.315508219416257,0,0.861693590931196,0,0,0,0,0.292255857911312,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,3.22227665555024,9.73922372846974,5.15559547031063,2.05524755931193,1.5107877947794,2.70009000092722,2.70192721934532,3.17199686288943,3.62432218226274,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.17230640686684,0,0.231768651889711,0,0,0,0,0.532427418478012,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr11:81681200..81681211,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:81681200..81681211,- | |||
|id=chr11:81681200..81681211,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.27e-20!10;UBERON:0000411!2.27e-20!10;UBERON:0001950!2.27e-20!10;UBERON:0000033!1.54e-17!63;UBERON:0002346!2.17e-17!71;UBERON:0003075!2.17e-17!71;UBERON:0007284!2.17e-17!71;UBERON:0003056!1.16e-15!49;UBERON:0001017!2.08e-15!73;UBERON:0005743!2.08e-15!73;UBERON:0002619!2.30e-15!17;UBERON:0000955!2.38e-15!50;UBERON:0006238!2.38e-15!50;UBERON:0000073!8.62e-15!75;UBERON:0001016!8.62e-15!75;UBERON:0001049!1.96e-14!52;UBERON:0005068!1.96e-14!52;UBERON:0006241!1.96e-14!52;UBERON:0007135!1.96e-14!52;UBERON:0002616!3.73e-14!49;UBERON:0000956!5.79e-14!21;UBERON:0001869!5.79e-14!21;UBERON:0000203!5.79e-14!21;UBERON:0004121!8.74e-14!102;UBERON:0000924!8.74e-14!102;UBERON:0006601!8.74e-14!102;UBERON:0002020!7.47e-13!34;UBERON:0002791!2.93e-12!29;UBERON:0003528!2.93e-12!29;UBERON:0001893!2.93e-12!29;UBERON:0003080!5.70e-12!40;UBERON:0007811!7.30e-11!86;UBERON:0002780!7.60e-11!39;UBERON:0001890!7.60e-11!39;UBERON:0006240!7.60e-11!39;UBERON:0000153!3.24e-10!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.45e-50,10;UBERON:0000411,9.45e-50,10;UBERON:0001950,9.45e-50,10;UBERON:0002619,9.55e-29,17;UBERON:0000956,5.11e-23,21;UBERON:0001869,5.11e-23,21;UBERON:0000203,5.11e-23,21;UBERON:0003056,7.38e-21,49;UBERON:0003528,1.27e-19,29;UBERON:0002791,1.27e-19,29;UBERON:0001893,1.27e-19,29;UBERON:0003080,2.05e-19,40;UBERON:0000955,6.11e-19,47;UBERON:0006238,6.11e-19,47;UBERON:0002346,8.78e-18,64;UBERON:0003075,8.78e-18,64;UBERON:0007284,8.78e-18,64;UBERON:0002780,5.53e-17,39;UBERON:0001890,5.53e-17,39;UBERON:0006240,5.53e-17,39;UBERON:0001049,6.16e-17,52;UBERON:0005068,6.16e-17,52;UBERON:0006241,6.16e-17,52;UBERON:0007135,6.16e-17,52;UBERON:0002616,1.24e-16,46;UBERON:0002020,1.66e-16,34;UBERON:0010371,2.58e-15,73;UBERON:0000073,6.96e-14,54;UBERON:0001017,2.54e-13,73;UBERON:0001016,6.60e-13,75;UBERON:0004121,6.75e-13,95;UBERON:0000924,6.75e-13,95;UBERON:0006601,6.75e-13,95;UBERON:0010314,1.12e-11,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.307213066512487,0,0.0914876436024097,0,0,0,0,0.883885756421003,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,1.37250180845588,0,0.695297280769106,1.27857728665165,0.41557608911912,2.43361894601636,0,0,0,0,0.130120442962704,0,0,0,0.272145996605311,1.15302348256365,0.468508622798644,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.315508219416257,0,0.861693590931196,0,0,0,0,0.292255857911312,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,3.22227665555024,9.73922372846974,5.15559547031063,2.05524755931193,1.5107877947794,2.70009000092722,2.70192721934532,3.17199686288943,3.62432218226274,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.17230640686684,0,0.231768651889711,0,0,0,0,0.532427418478012,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr11:81681200..81681211,- | |||
}} |
Revision as of 21:08, 12 September 2013
Short description: | p@chr11:81681200..81681211, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:81681200..81681211, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.45e-50 | 10 |
visual cortex | 9.45e-50 | 10 |
neocortex | 9.45e-50 | 10 |
regional part of cerebral cortex | 9.55e-29 | 17 |
cerebral cortex | 5.11e-23 | 21 |
cerebral hemisphere | 5.11e-23 | 21 |
pallium | 5.11e-23 | 21 |
pre-chordal neural plate | 7.38e-21 | 49 |
brain grey matter | 1.27e-19 | 29 |
regional part of telencephalon | 1.27e-19 | 29 |
telencephalon | 1.27e-19 | 29 |
anterior neural tube | 2.05e-19 | 40 |
brain | 6.11e-19 | 47 |
future brain | 6.11e-19 | 47 |
neurectoderm | 8.78e-18 | 64 |
neural plate | 8.78e-18 | 64 |
presumptive neural plate | 8.78e-18 | 64 |
regional part of forebrain | 5.53e-17 | 39 |
forebrain | 5.53e-17 | 39 |
future forebrain | 5.53e-17 | 39 |
neural tube | 6.16e-17 | 52 |
neural rod | 6.16e-17 | 52 |
future spinal cord | 6.16e-17 | 52 |
neural keel | 6.16e-17 | 52 |
regional part of brain | 1.24e-16 | 46 |
gray matter | 1.66e-16 | 34 |
ecto-epithelium | 2.58e-15 | 73 |
regional part of nervous system | 6.96e-14 | 54 |
central nervous system | 2.54e-13 | 73 |
nervous system | 6.60e-13 | 75 |
ectoderm-derived structure | 6.75e-13 | 95 |
ectoderm | 6.75e-13 | 95 |
presumptive ectoderm | 6.75e-13 | 95 |
structure with developmental contribution from neural crest | 1.12e-11 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.