FFCP PHASE1:Mm9::chr11:78001954..78001985,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19376|HGNC=|MCL_coexpression_id=2716|UniProt=Q0PD20|association_with_transcript=22bp_to_ENSMUST00000002128_5end|description=CAGE_peak_1_at_Rab34_5end|id=chr11:78001954..78001985,+|ontology_enrichment_celltype=CL:0000333!1.18e-07!10;CL:0000095!1.18e-07!10;CL:0000243!1.18e-07!10;CL:0000123!1.18e-07!10;CL:0000125!1.18e-07!10;CL:0000030!1.18e-07!10;CL:0000339!1.18e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,1.09e-07,10;CL:0000095,1.09e-07,10;CL:0000243,1.09e-07,10;CL:0000123,1.09e-07,10;CL:0000125,1.09e-07,10;CL:0000030,1.09e-07,10;CL:0000339,1.09e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=12.8119077683835,0.348975407639361,0.909998478779072,0,0,0,0.233612640595526,0,4.22366166455,4.21316147379588,0.171217968225505,0.239316476986009,0,0,0.333109761815663,0,0,0,0,0,7.82398269389842,0.595745707205312,0.783599367416806,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,46.0782353790613,46.0251267736596,45.7031412882587,93.1045699774167,25.9449936092731,30.3166932173571,27.2201858703997,40.3160894281044,47.4383462404406,0,0,0,39.8752125855718,34.9570796725283,44.34779993586,3.84401275633236,3.70293685490423,5.07065122804943,74.8846415872782,43.5754450094458,17.997994345628,15.8218618010716,17.0515227587064,34.4540127096165,19.2109152660777,4.14758449233911,4.99521971827255,5.8890989178387,6.28432165688368,9.718215801871,4.40966877173835,3.73797336971122,5.51531271966013,8.8092704799511,4.72443150915195,4.14737639791857,6.72620067423989,3.84248103130121,3.64639359389732,4.74611098302348,7.31591393041184,4.73674568108111,8.54422897873636,6.83384067835694,5.96478226640962,30.0632987532741,48.1390837880224,6.37701875143691,2.58127163094416,0,0,0,0,2.52799956237153,22.4968025803036,30.1351765339328,23.6737514921928,13.3801248787846,12.8326477414318,25.4805239706646,14.2213340630666,5.41227602528035,9.62767488805375,7.58286667522175,3.53970027129086,2.07150306917737,18.2583831049734,18.5629299639765,14.0054120023585,17.0655467969483,19.8953885529462,14.6985883919631,19.1013218821107,5.93267922562497,8.96516012903452,0,11.9707468961083,4.41683036920787,2.90925151881133,5.59175283654366,6.14839673724249,6.49284791121711,0.766371165625774,0.239630249011841,0.599902730993408,0.381210681219194,4.6435098215495,3.66000482254901,9.80103946480342,2.9550134432687,4.85859368927628,2.90903262383384,5.353961681236,22.4046600470696,6.34475550111474,4.80173241023982,2.52530227063769,18.3469824577412,20.0014830857121,11.5239763075424,14.6183673300644,13.9474823260222,10.7615525039274,11.056803498048,4.39795730256327,19.185551371023,15.1284864134255,16.5394056714112,24.9883134967435,20.2974491934686,15.6713474934975,14.8163138213719,13.5343301436575,0,0.772043721344145,0.284163499395593,7.87077935634907,9.61556845922494,6.48223421259654,8.28606574548236,10.0349758191176,8.02188987014367,6.97601834251224,7.24338183778972,6.889155199663,6.08871444679878,4.43252153013557,3.72916523910936,4.09359964790931,5.04965265169416,3.22095405024892,3.36463917702604,5.35103984372279,0.330418782983798,2.3800550999719,23.8882840599462,19.5078804362768,12.6290112095651,9.27744213267376,9.33987784148455,8.56015317506516,4.2707615539006,5.59976446061637,5.52937459360593,5.57078121715222,3.8992817423824,0,2.80979464837102,2.98711909881551,12.5180814629034,14.2810640762161,15.7790829942313,14.4592442770173,15.3222464862424,19.0068071902763,19.8562726570168,14.3181843540214,13.6588893221996,18.5095745882701,0.889357881261447,1.83529616287703,1.37591296579242,1.34917267430912,2.23146133527353,2.65294875727659,4.32863948028414,2.01387296215567,3.40483976227574,2.74561413188081,4.31304619582064,3.72140947668503,2.18426371180192,1.26289438973556,0.896987067609561,0.964887042726734,5.35784251483154,22.5494780006877,13.5260930446881,14.7678224624414,13.3773441524446,13.7355131102289,10.9500074807566,12.6836871107569,11.9802709520705,11.9590932410338,8.92946704481928,6.55453258862952,9.84304396635605,8.53429445630918,3.01582567878545,3.26343410291226,1.96705709207614,6.34654516500885,4.17431533968259,4.57125577709592,20.3279332267078,5.04941854408746,12.6203287766503,12.8844785617891,9.69405289797595,18.4005974423465,27.1814382380521,24.3445816478396,22.2645885921192,19.5811424800579,12.6492088942888,8.03303291054518,14.6198287764517,17.450429159391,15.6371480979433,18.6416238958965,3.98235415019888,15.0523994416088,12.9999129494843,15.0884063804718,12.1073776081117,9.53048958626175,11.3708448994017,8.36127577798263,4.9909632973861,4.10847785316561,3.16255825724996,2.06271086496374,6.46835250932197,15.665315180724,21.7322588755028,22.7197257133488,14.5418991586664,16.4099312193905,16.6194510808142,14.9187825066154,2.81606049676452,1.90648863777438,3.08739757276947,6.76033637060068,20.1830533369882,16.5860543552429,13.8471919043638,13.9519764783302,3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| ||
|EntrezGene=19376 | |||
|HGNC= | |||
|MCL_coexpression_id=2716 | |||
|UniProt=Q0PD20 | |||
|association_with_transcript=22bp_to_ENSMUST00000002128_5end | |||
|description=CAGE_peak_1_at_Rab34_5end | |||
|id=chr11:78001954..78001985,+ | |||
|ontology_enrichment_celltype=CL:0000333!1.18e-07!10;CL:0000095!1.18e-07!10;CL:0000243!1.18e-07!10;CL:0000123!1.18e-07!10;CL:0000125!1.18e-07!10;CL:0000030!1.18e-07!10;CL:0000339!1.18e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.09e-07,10;CL:0000095,1.09e-07,10;CL:0000243,1.09e-07,10;CL:0000123,1.09e-07,10;CL:0000125,1.09e-07,10;CL:0000030,1.09e-07,10;CL:0000339,1.09e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=12.8119077683835,0.348975407639361,0.909998478779072,0,0,0,0.233612640595526,0,4.22366166455,4.21316147379588,0.171217968225505,0.239316476986009,0,0,0.333109761815663,0,0,0,0,0,7.82398269389842,0.595745707205312,0.783599367416806,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,46.0782353790613,46.0251267736596,45.7031412882587,93.1045699774167,25.9449936092731,30.3166932173571,27.2201858703997,40.3160894281044,47.4383462404406,0,0,0,39.8752125855718,34.9570796725283,44.34779993586,3.84401275633236,3.70293685490423,5.07065122804943,74.8846415872782,43.5754450094458,17.997994345628,15.8218618010716,17.0515227587064,34.4540127096165,19.2109152660777,4.14758449233911,4.99521971827255,5.8890989178387,6.28432165688368,9.718215801871,4.40966877173835,3.73797336971122,5.51531271966013,8.8092704799511,4.72443150915195,4.14737639791857,6.72620067423989,3.84248103130121,3.64639359389732,4.74611098302348,7.31591393041184,4.73674568108111,8.54422897873636,6.83384067835694,5.96478226640962,30.0632987532741,48.1390837880224,6.37701875143691,2.58127163094416,0,0,0,0,2.52799956237153,22.4968025803036,30.1351765339328,23.6737514921928,13.3801248787846,12.8326477414318,25.4805239706646,14.2213340630666,5.41227602528035,9.62767488805375,7.58286667522175,3.53970027129086,2.07150306917737,18.2583831049734,18.5629299639765,14.0054120023585,17.0655467969483,19.8953885529462,14.6985883919631,19.1013218821107,5.93267922562497,8.96516012903452,0,11.9707468961083,4.41683036920787,2.90925151881133,5.59175283654366,6.14839673724249,6.49284791121711,0.766371165625774,0.239630249011841,0.599902730993408,0.381210681219194,4.6435098215495,3.66000482254901,9.80103946480342,2.9550134432687,4.85859368927628,2.90903262383384,5.353961681236,22.4046600470696,6.34475550111474,4.80173241023982,2.52530227063769,18.3469824577412,20.0014830857121,11.5239763075424,14.6183673300644,13.9474823260222,10.7615525039274,11.056803498048,4.39795730256327,19.185551371023,15.1284864134255,16.5394056714112,24.9883134967435,20.2974491934686,15.6713474934975,14.8163138213719,13.5343301436575,0,0.772043721344145,0.284163499395593,7.87077935634907,9.61556845922494,6.48223421259654,8.28606574548236,10.0349758191176,8.02188987014367,6.97601834251224,7.24338183778972,6.889155199663,6.08871444679878,4.43252153013557,3.72916523910936,4.09359964790931,5.04965265169416,3.22095405024892,3.36463917702604,5.35103984372279,0.330418782983798,2.3800550999719,23.8882840599462,19.5078804362768,12.6290112095651,9.27744213267376,9.33987784148455,8.56015317506516,4.2707615539006,5.59976446061637,5.52937459360593,5.57078121715222,3.8992817423824,0,2.80979464837102,2.98711909881551,12.5180814629034,14.2810640762161,15.7790829942313,14.4592442770173,15.3222464862424,19.0068071902763,19.8562726570168,14.3181843540214,13.6588893221996,18.5095745882701,0.889357881261447,1.83529616287703,1.37591296579242,1.34917267430912,2.23146133527353,2.65294875727659,4.32863948028414,2.01387296215567,3.40483976227574,2.74561413188081,4.31304619582064,3.72140947668503,2.18426371180192,1.26289438973556,0.896987067609561,0.964887042726734,5.35784251483154,22.5494780006877,13.5260930446881,14.7678224624414,13.3773441524446,13.7355131102289,10.9500074807566,12.6836871107569,11.9802709520705,11.9590932410338,8.92946704481928,6.55453258862952,9.84304396635605,8.53429445630918,3.01582567878545,3.26343410291226,1.96705709207614,6.34654516500885,4.17431533968259,4.57125577709592,20.3279332267078,5.04941854408746,12.6203287766503,12.8844785617891,9.69405289797595,18.4005974423465,27.1814382380521,24.3445816478396,22.2645885921192,19.5811424800579,12.6492088942888,8.03303291054518,14.6198287764517,17.450429159391,15.6371480979433,18.6416238958965,3.98235415019888,15.0523994416088,12.9999129494843,15.0884063804718,12.1073776081117,9.53048958626175,11.3708448994017,8.36127577798263,4.9909632973861,4.10847785316561,3.16255825724996,2.06271086496374,6.46835250932197,15.665315180724,21.7322588755028,22.7197257133488,14.5418991586664,16.4099312193905,16.6194510808142,14.9187825066154,2.81606049676452,1.90648863777438,3.08739757276947,6.76033637060068,20.1830533369882,16.5860543552429,13.8471919043638,13.9519764783302,3.49777003955821,3.52308073819968,0.854354403989263,13.4151464176095,6.66700298530962,1.13021074202815,0.410082683163076,1.60144721244566,0.679913719975421,0.279902904647316,0.690999869022119,2.86401185404534,17.556647643753,15.8589184358942,14.3647103292996,12.5452977608681,8.7345025498471,11.0588764035553,8.18269211680826,4.4498510137285,2.98114438571124,1.86401793926078,2.25477175473676,8.82147621659475,13.567596217482,12.250424865675,15.7574984642832,12.8406655372991,17.0167996036343,14.1922779479906,15.7289016638566,7.73069186643219,3.74439008135225,1.26404448251271,12.9744137785705,6.36807934421929,4.28738715826724,2.8644271306797,3.17890167650024,1.56254084375959,1.32920574457119,0.807731599585181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| |||
|short_description=p1@Rab34 | |||
}} | |||
Revision as of 21:01, 12 September 2013
| Short description: | p1@Rab34 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Rab34_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2716 |
| Association with transcript: | 22bp_to_ENSMUST00000002128_5end |
| EntrezGene: | Rab34 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 1.09e-07 | 10 |
| neuron associated cell | 1.09e-07 | 10 |
| glial cell (sensu Vertebrata) | 1.09e-07 | 10 |
| neuron associated cell (sensu Vertebrata) | 1.09e-07 | 10 |
| glial cell | 1.09e-07 | 10 |
| glioblast | 1.09e-07 | 10 |
| glioblast (sensu Vertebrata) | 1.09e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
