FFCP PHASE1:Mm9::chr11:74433096..74433145,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=432582|HGNC=|MCL_coexpression_id=704|UniProt=D3Z4R5,Q5SUE3|association_with_transcript=0bp_to_ENSMUST00000092916,ENSMUST00000100866,NM_001013784,uc007kbz.1_5end|description=CAGE_peak_1_at_E130309D14Rik_5end|id=chr11:74433096..74433145,+|ontology_enrichment_celltype=CL:0000540!1.84e-09!33;CL:0000047!1.84e-09!33;CL:0000031!1.84e-09!33;CL:0000404!1.84e-09!33;CL:0000117!2.52e-09!23;CL:0000337!2.52e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-10,23;CL:0000337,1.23e-10,23;CL:0000540,9.22e-10,33;CL:0000047,9.22e-10,33;CL:0000031,9.22e-10,33;CL:0000404,9.22e-10,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.94e-22!71;UBERON:0003075!5.94e-22!71;UBERON:0007284!5.94e-22!71;UBERON:0001017!1.93e-20!73;UBERON:0005743!1.93e-20!73;UBERON:0000073!6.32e-20!75;UBERON:0001016!6.32e-20!75;UBERON:0000955!1.16e-19!50;UBERON:0006238!1.16e-19!50;UBERON:0001049!2.27e-19!52;UBERON:0005068!2.27e-19!52;UBERON:0006241!2.27e-19!52;UBERON:0007135!2.27e-19!52;UBERON:0002616!5.02e-19!49;UBERON:0000033!3.98e-18!63;UBERON:0004121!2.62e-16!102;UBERON:0000924!2.62e-16!102;UBERON:0006601!2.62e-16!102;UBERON:0003056!7.62e-16!49;UBERON:0003080!2.49e-15!40;UBERON:0002780!8.89e-15!39;UBERON:0001890!8.89e-15!39;UBERON:0006240!8.89e-15!39;UBERON:0002020!6.56e-13!34;UBERON:0002791!1.44e-11!29;UBERON:0003528!1.44e-11!29;UBERON:0001893!1.44e-11!29;UBERON:0000956!4.10e-08!21;UBERON:0001869!4.10e-08!21;UBERON:0000203!4.10e-08!21;UBERON:0007811!3.37e-07!86;UBERON:0002021!7.46e-07!10;UBERON:0000411!7.46e-07!10;UBERON:0001950!7.46e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.26e-24,54;UBERON:0002346,7.16e-24,64;UBERON:0003075,7.16e-24,64;UBERON:0007284,7.16e-24,64;UBERON:0001017,4.35e-23,73;UBERON:0001049,1.26e-22,52;UBERON:0005068,1.26e-22,52;UBERON:0006241,1.26e-22,52;UBERON:0007135,1.26e-22,52;UBERON:0001016,9.30e-22,75;UBERON:0000955,5.48e-21,47;UBERON:0006238,5.48e-21,47;UBERON:0002616,2.95e-20,46;UBERON:0003056,9.57e-19,49;UBERON:0010371,1.75e-18,73;UBERON:0003080,3.52e-18,40;UBERON:0002780,1.58e-17,39;UBERON:0001890,1.58e-17,39;UBERON:0006240,1.58e-17,39;UBERON:0004121,3.75e-17,95;UBERON:0000924,3.75e-17,95;UBERON:0006601,3.75e-17,95;UBERON:0010314,3.47e-16,92;UBERON:0002020,2.45e-15,34;UBERON:0003528,8.90e-14,29;UBERON:0002791,8.90e-14,29;UBERON:0001893,8.90e-14,29;UBERON:0000956,1.03e-09,21;UBERON:0001869,1.03e-09,21;UBERON:0000203,1.03e-09,21;UBERON:0000025,3.89e-08,114;UBERON:0002619,8.06e-08,17;UBERON:0002021,9.42e-08,10;UBERON:0000411,9.42e-08,10;UBERON:0001950,9.42e-08,10|phase1_expression=1.28119077683835,0.348975407639361,0,0,0,2.35030980676646,1.63528848416868,0,0,0,0,0,0,0,11.9919514253639,23.0821804824402,31.4802845157666,0,0.274228867211478,1.69755860719212,2.8064285749853,0,0,0.319984845586813,0.45881856213434,0,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0.202753862439029,0.183546752161682,3.12956537739216,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.05791152148994,5.81890077199236,4.43681982454325,0.338844532069132,0,0,0,0,0.299600110518405,0,6.0139975138917,4.86021377994086,6.52007380189284,1.71390590642282,5.74258206474195,6.36952155917761,6.61333750025831,2.75765635983006,12.1127469099328,12.7687338085188,11.5204899942183,6.59431438650969,7.95942499340964,2.6045668527838,8.09630697104005,12.9435400307286,8.40390362772456,3.83017161115768,5.55249555116501,5.59198337475902,0.302904773332736,0.529000920747499,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,2.3750742250372,2.4287945747259,5.1759131313064,3.68984795609694,3.76806601381556,2.11659672844269,1.63366568728578,0,0,13.2691582792481,2.42650274921114,6.62524555381181,7.27312879702833,1.86391761218122,20.4946557908083,14.0329293565015,0.255457055208591,0,0,0,12.4326230706003,17.3850229071078,11.8115090986093,15.1227158567281,14.0643501531682,12.259494629014,10.058958310201,0,7.71323217782577,0,1.47309299120532,1.04096354370163,1.37941262660084,1.26043490863744,2.56198190320716,2.04109497453984,2.17793324484245,2.71735001223214,4.65666067330228,0.431135985865684,0.189106080167819,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,1.65700618028402,3.28336483973535,1.80062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,9.88362758251398,10.5991750750663,0.660837565967596,0.528901133327089,0.639864751605702,0.696710015581316,0.644337306610467,0,0.667134131534611,0.570676878337677,1.42358718463353,0.823494773620054,1.25667604400135,0.596869416123452,1.36474860983384,0,0.216138049874694,0,0.379335801906163,1.37098215131675,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0.123397163921801,0,18.3529616287703,23.5870794135844,26.5337292614127,29.6175777227214,35.9353968031101,28.7727212513004,23.5910832709665,11.5116011010275,3.56929837144506,2.87536413054709,1.86070473834252,0.624075346229121,0,0,0,0,1.70542270593436,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| ||
|EntrezGene=432582 | |||
|HGNC= | |||
|MCL_coexpression_id=704 | |||
|UniProt=D3Z4R5,Q5SUE3 | |||
|association_with_transcript=0bp_to_ENSMUST00000092916,ENSMUST00000100866,NM_001013784,uc007kbz.1_5end | |||
|description=CAGE_peak_1_at_E130309D14Rik_5end | |||
|id=chr11:74433096..74433145,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.84e-09!33;CL:0000047!1.84e-09!33;CL:0000031!1.84e-09!33;CL:0000404!1.84e-09!33;CL:0000117!2.52e-09!23;CL:0000337!2.52e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-10,23;CL:0000337,1.23e-10,23;CL:0000540,9.22e-10,33;CL:0000047,9.22e-10,33;CL:0000031,9.22e-10,33;CL:0000404,9.22e-10,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.94e-22!71;UBERON:0003075!5.94e-22!71;UBERON:0007284!5.94e-22!71;UBERON:0001017!1.93e-20!73;UBERON:0005743!1.93e-20!73;UBERON:0000073!6.32e-20!75;UBERON:0001016!6.32e-20!75;UBERON:0000955!1.16e-19!50;UBERON:0006238!1.16e-19!50;UBERON:0001049!2.27e-19!52;UBERON:0005068!2.27e-19!52;UBERON:0006241!2.27e-19!52;UBERON:0007135!2.27e-19!52;UBERON:0002616!5.02e-19!49;UBERON:0000033!3.98e-18!63;UBERON:0004121!2.62e-16!102;UBERON:0000924!2.62e-16!102;UBERON:0006601!2.62e-16!102;UBERON:0003056!7.62e-16!49;UBERON:0003080!2.49e-15!40;UBERON:0002780!8.89e-15!39;UBERON:0001890!8.89e-15!39;UBERON:0006240!8.89e-15!39;UBERON:0002020!6.56e-13!34;UBERON:0002791!1.44e-11!29;UBERON:0003528!1.44e-11!29;UBERON:0001893!1.44e-11!29;UBERON:0000956!4.10e-08!21;UBERON:0001869!4.10e-08!21;UBERON:0000203!4.10e-08!21;UBERON:0007811!3.37e-07!86;UBERON:0002021!7.46e-07!10;UBERON:0000411!7.46e-07!10;UBERON:0001950!7.46e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.26e-24,54;UBERON:0002346,7.16e-24,64;UBERON:0003075,7.16e-24,64;UBERON:0007284,7.16e-24,64;UBERON:0001017,4.35e-23,73;UBERON:0001049,1.26e-22,52;UBERON:0005068,1.26e-22,52;UBERON:0006241,1.26e-22,52;UBERON:0007135,1.26e-22,52;UBERON:0001016,9.30e-22,75;UBERON:0000955,5.48e-21,47;UBERON:0006238,5.48e-21,47;UBERON:0002616,2.95e-20,46;UBERON:0003056,9.57e-19,49;UBERON:0010371,1.75e-18,73;UBERON:0003080,3.52e-18,40;UBERON:0002780,1.58e-17,39;UBERON:0001890,1.58e-17,39;UBERON:0006240,1.58e-17,39;UBERON:0004121,3.75e-17,95;UBERON:0000924,3.75e-17,95;UBERON:0006601,3.75e-17,95;UBERON:0010314,3.47e-16,92;UBERON:0002020,2.45e-15,34;UBERON:0003528,8.90e-14,29;UBERON:0002791,8.90e-14,29;UBERON:0001893,8.90e-14,29;UBERON:0000956,1.03e-09,21;UBERON:0001869,1.03e-09,21;UBERON:0000203,1.03e-09,21;UBERON:0000025,3.89e-08,114;UBERON:0002619,8.06e-08,17;UBERON:0002021,9.42e-08,10;UBERON:0000411,9.42e-08,10;UBERON:0001950,9.42e-08,10 | |||
|phase1_expression=1.28119077683835,0.348975407639361,0,0,0,2.35030980676646,1.63528848416868,0,0,0,0,0,0,0,11.9919514253639,23.0821804824402,31.4802845157666,0,0.274228867211478,1.69755860719212,2.8064285749853,0,0,0.319984845586813,0.45881856213434,0,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0.202753862439029,0.183546752161682,3.12956537739216,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.05791152148994,5.81890077199236,4.43681982454325,0.338844532069132,0,0,0,0,0.299600110518405,0,6.0139975138917,4.86021377994086,6.52007380189284,1.71390590642282,5.74258206474195,6.36952155917761,6.61333750025831,2.75765635983006,12.1127469099328,12.7687338085188,11.5204899942183,6.59431438650969,7.95942499340964,2.6045668527838,8.09630697104005,12.9435400307286,8.40390362772456,3.83017161115768,5.55249555116501,5.59198337475902,0.302904773332736,0.529000920747499,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,2.3750742250372,2.4287945747259,5.1759131313064,3.68984795609694,3.76806601381556,2.11659672844269,1.63366568728578,0,0,13.2691582792481,2.42650274921114,6.62524555381181,7.27312879702833,1.86391761218122,20.4946557908083,14.0329293565015,0.255457055208591,0,0,0,12.4326230706003,17.3850229071078,11.8115090986093,15.1227158567281,14.0643501531682,12.259494629014,10.058958310201,0,7.71323217782577,0,1.47309299120532,1.04096354370163,1.37941262660084,1.26043490863744,2.56198190320716,2.04109497453984,2.17793324484245,2.71735001223214,4.65666067330228,0.431135985865684,0.189106080167819,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,1.65700618028402,3.28336483973535,1.80062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,9.88362758251398,10.5991750750663,0.660837565967596,0.528901133327089,0.639864751605702,0.696710015581316,0.644337306610467,0,0.667134131534611,0.570676878337677,1.42358718463353,0.823494773620054,1.25667604400135,0.596869416123452,1.36474860983384,0,0.216138049874694,0,0.379335801906163,1.37098215131675,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0.123397163921801,0,18.3529616287703,23.5870794135844,26.5337292614127,29.6175777227214,35.9353968031101,28.7727212513004,23.5910832709665,11.5116011010275,3.56929837144506,2.87536413054709,1.86070473834252,0.624075346229121,0,0,0,0,1.70542270593436,0.651859905768103,0,0.234690248288502,0.167506257441816,0,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0,0,0,0,0,12.2018448390722,10.0802050469295,0,0,1.89304931649754,1.56175497718655,3.87762115919038,0.955875191810208,1.78238939265915,1.13230612315533,0.809621403349789,2.04579100537918,3.95287777946523,14.7807805554031,0,0.35613120733451,0.325773918707152,0,1.32745138339963,0.242780636154981,1.209294227859,0.943025398779491,0.885905678642318,1.22974059177571,1.55056975900933,0,0.356497378384721,0,0,0,24.8520912200265,1.26042765821917,1.16422815404479,1.07168517515796,6.0295679438373,8.20496560969525,8.55654907131029,15.8321773539592,0,0,0.220528398054962,0,0,0.120625849856312,0,0,0.874442509889552,11.3109434226411,17.5997007221788,1.44470807574256,5.55583582109135,25.8064786096427,16.6766957819651,24.4792645330979,0,0,0,1.90934123603023,0.949007980743406,1.21991680276109,0.756037385752609,0.836353184057875,0.436725127492355,0.674321731924103,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0.448549638131936,0.165458490457098,2.33341426012857,2.19571699912143,1.01373675294467,0.58678619322877,0.39061315453185,0.314578033277133,0,0,0,0.810900861160657,0.205421914329655,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0.443971906748129,1.07656627931371,0,0.579568782096571,0,0,0,0,13.5540442228096,17.0320337507655,8.02053718815155,12.5452823110892,11.6464028361009,12.8416962556249,14.8504950050997,11.2580300806055,16.3131267234314,13.9795284172991,0.726511433089237,1.59609949360412,3.24393850932855,6.80698807791223,4.40187641518763,3.12533964365024,4.66718128383392,3.29656091582231,3.85103051510178,3.28506375292937,1.77435509923168,3.39527414494937,4.02658482120494,4.67383612555546,3.67587001315925,4.28664322154766,3.82418275618023,4.05109362973781,4.94503080963968,2.35518272215036,2.05721551431249,2.30718548007139,3.57654284920981,2.47088908274958,3.10560955370591,3.9768865709088,3.65855945745545,2.63069711437843,2.58027816307137,1.12228454331548,3.32178050747688,4.13718825977367,3.27384834535751,2.16911577660352,2.50778594275484,4.24677982494508,2.33931608445408,2.57845264857958,0.956441660344217,1.54413993383661,3.2461496986859 | |||
|short_description=p1@E130309D14Rik | |||
}} |
Revision as of 20:51, 12 September 2013
Short description: | p1@E130309D14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_E130309D14Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:704 |
Association with transcript: | 0bp_to_ENSMUST00000092916, ENSMUST00000100866, NM_001013784, uc007kbz.1_5end |
EntrezGene: | E130309D14Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.23e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-10 | 23 |
neuron | 9.22e-10 | 33 |
neuronal stem cell | 9.22e-10 | 33 |
neuroblast | 9.22e-10 | 33 |
electrically signaling cell | 9.22e-10 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.26e-24 | 54 |
neurectoderm | 7.16e-24 | 64 |
neural plate | 7.16e-24 | 64 |
presumptive neural plate | 7.16e-24 | 64 |
central nervous system | 4.35e-23 | 73 |
neural tube | 1.26e-22 | 52 |
neural rod | 1.26e-22 | 52 |
future spinal cord | 1.26e-22 | 52 |
neural keel | 1.26e-22 | 52 |
nervous system | 9.30e-22 | 75 |
brain | 5.48e-21 | 47 |
future brain | 5.48e-21 | 47 |
regional part of brain | 2.95e-20 | 46 |
pre-chordal neural plate | 9.57e-19 | 49 |
ecto-epithelium | 1.75e-18 | 73 |
anterior neural tube | 3.52e-18 | 40 |
regional part of forebrain | 1.58e-17 | 39 |
forebrain | 1.58e-17 | 39 |
future forebrain | 1.58e-17 | 39 |
ectoderm-derived structure | 3.75e-17 | 95 |
ectoderm | 3.75e-17 | 95 |
presumptive ectoderm | 3.75e-17 | 95 |
structure with developmental contribution from neural crest | 3.47e-16 | 92 |
gray matter | 2.45e-15 | 34 |
brain grey matter | 8.90e-14 | 29 |
regional part of telencephalon | 8.90e-14 | 29 |
telencephalon | 8.90e-14 | 29 |
cerebral cortex | 1.03e-09 | 21 |
cerebral hemisphere | 1.03e-09 | 21 |
pallium | 1.03e-09 | 21 |
tube | 3.89e-08 | 114 |
regional part of cerebral cortex | 8.06e-08 | 17 |
occipital lobe | 9.42e-08 | 10 |
visual cortex | 9.42e-08 | 10 |
neocortex | 9.42e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.