FFCP PHASE1:Hg19::chr3:111578640..111578645,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90102|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29573|TSSclassifier=S|UniProt=Q86SQ0|association_with_transcript=0bp_to_ENST00000393925_5end|description=CAGE_peak_9_at_PHLDB2_5end|id=chr3:111578640..111578645,+|ontology_enrichment_celltype=CL:0000055!1.18e-07!180|ontology_enrichment_celltype_v019=CL:0002174;1.39e-07;1!CL:0000342;1.39e-07;1!CL:0002565;1.39e-07;1!CL:0000501;1.39e-07;1!CL:1000306;2.17e-07;4!CL:0002547;2.17e-07;4!CL:0000569;3.59e-07;4|ontology_enrichment_celltype_v019_2=CL:0002174,1.39e-07,1;CL:0000501,1.39e-07,1;CL:1000306,1.58e-07,4;CL:0002547,1.58e-07,4;CL:0000342,3.17e-07,1;CL:0002565,3.17e-07,1;CL:0000569,3.38e-07,4;CL:0000011,3.38e-07,4|ontology_enrichment_development_v019=UBERON:0004140;4.87e-08;1!UBERON:0010226;1.39e-07;1!CL:0000011;3.59e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.30e-08!27;UBERON:0000490!9.49e-08!138;UBERON:0004872!1.91e-07!84;UBERON:0001009!2.23e-07!113|ontology_enrichment_uberon_v019=UBERON:0007100;1.25e-11;25!UBERON:0000948;6.20e-10;22!UBERON:0002084;1.39e-07;1!UBERON:0007195;1.39e-07;1!UBERON:0002082;1.39e-07;1!UBERON:0002506;1.39e-07;1!UBERON:0001769;1.39e-07;1!UBERON:0004797;2.17e-07;4!UBERON:0000415;2.17e-07;4!UBERON:0007240;2.17e-07;4!UBERON:0005742;2.17e-07;4!UBERON:0005734;2.17e-07;4!UBERON:0004664;2.17e-07;4!UBERON:0004663;2.17e-07;4!UBERON:0000947;2.37e-07;21!UBERON:0010191;2.37e-07;21!UBERON:0000488;3.59e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001009,1.15e-14,112;UBERON:0004535,2.18e-13,109;UBERON:0007100,9.22e-11,27;UBERON:0002049,1.93e-09,78;UBERON:0007798,1.93e-09,78;UBERON:0000948,3.68e-09,24;UBERON:0005498,3.68e-09,24;UBERON:0004140,3.68e-09,24;UBERON:0009881,3.68e-09,24;UBERON:0004141,3.68e-09,24;UBERON:0003084,3.68e-09,24;UBERON:0007005,3.68e-09,24;UBERON:0004139,3.68e-09,24;UBERON:0004291,3.68e-09,24;UBERON:0004872,7.83e-09,83;UBERON:0002084,1.22e-07,1;UBERON:0002082,1.22e-07,1;UBERON:0010226,1.22e-07,1;UBERON:0000947,1.46e-07,21;UBERON:0010191,1.46e-07,21;UBERON:0000415,1.58e-07,4;UBERON:0007240,1.58e-07,4;UBERON:0005742,1.58e-07,4;UBERON:0005734,1.58e-07,4;UBERON:0004664,1.58e-07,4;UBERON:0004663,1.58e-07,4;UBERON:0007195,2.31e-07,1;UBERON:0002506,3.17e-07,1;UBERON:0001769,3.17e-07,1;UBERON:0000488,3.60e-07,4|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.247532705920093,0,0.672325146451775,0,1.46062018077475,0,0.246242116153576,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,2.43806866313962,0,0.767175371061182,0,0,0,0,0,0.378139268656271,1.99556457716308,0.87834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0,0,0.419499436209906,0.550236083880135,0.626984899610432,1.03366703667732,0,2.34304428935269,0.402829317109147,0,0.732186172644509,0,0.81014194788176,0.535798369704479,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.759783069987479,1.85372853138506,2.0078563452417,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0.653847612453835,0,0.576175924479999,0.234321431833797,0,0,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,0.358779271377724,0,0.423863802319124,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,1.18143432568886,0.584622030967192,1.26216887122057,0.0920498986422993,0.161646056818812,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0.435758888184812,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,1.02940686179115,0.109750285408626,0,0.100528972411631,0,0,0,1.44331342025273,0.34779121492523,0.821860859650752,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0.87192013766656,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.887808626565635,0.246381468041427,0,0.116210378459959,0,0,0,0.344443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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90102 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29573 | |||
|TSSclassifier=S | |||
|UniProt=Q86SQ0 | |||
|association_with_transcript=0bp_to_ENST00000393925_5end | |||
|description=CAGE_peak_9_at_PHLDB2_5end | |||
|id=chr3:111578640..111578645,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002174;1.39e-07;1!CL:0000342;1.39e-07;1!CL:0002565;1.39e-07;1!CL:0000501;1.39e-07;1!CL:1000306;2.17e-07;4!CL:0002547;2.17e-07;4!CL:0000569;3.59e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,1.39e-07,1;CL:0000501,1.39e-07,1;CL:1000306,1.58e-07,4;CL:0002547,1.58e-07,4;CL:0000342,3.17e-07,1;CL:0002565,3.17e-07,1;CL:0000569,3.38e-07,4;CL:0000011,3.38e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.87e-08;1!UBERON:0010226;1.39e-07;1!CL:0000011;3.59e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.30e-08!27;UBERON:0000490!9.49e-08!138;UBERON:0004872!1.91e-07!84;UBERON:0001009!2.23e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.25e-11;25!UBERON:0000948;6.20e-10;22!UBERON:0002084;1.39e-07;1!UBERON:0007195;1.39e-07;1!UBERON:0002082;1.39e-07;1!UBERON:0002506;1.39e-07;1!UBERON:0001769;1.39e-07;1!UBERON:0004797;2.17e-07;4!UBERON:0000415;2.17e-07;4!UBERON:0007240;2.17e-07;4!UBERON:0005742;2.17e-07;4!UBERON:0005734;2.17e-07;4!UBERON:0004664;2.17e-07;4!UBERON:0004663;2.17e-07;4!UBERON:0000947;2.37e-07;21!UBERON:0010191;2.37e-07;21!UBERON:0000488;3.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,1.15e-14,112;UBERON:0004535,2.18e-13,109;UBERON:0007100,9.22e-11,27;UBERON:0002049,1.93e-09,78;UBERON:0007798,1.93e-09,78;UBERON:0000948,3.68e-09,24;UBERON:0005498,3.68e-09,24;UBERON:0004140,3.68e-09,24;UBERON:0009881,3.68e-09,24;UBERON:0004141,3.68e-09,24;UBERON:0003084,3.68e-09,24;UBERON:0007005,3.68e-09,24;UBERON:0004139,3.68e-09,24;UBERON:0004291,3.68e-09,24;UBERON:0004872,7.83e-09,83;UBERON:0002084,1.22e-07,1;UBERON:0002082,1.22e-07,1;UBERON:0010226,1.22e-07,1;UBERON:0000947,1.46e-07,21;UBERON:0010191,1.46e-07,21;UBERON:0000415,1.58e-07,4;UBERON:0007240,1.58e-07,4;UBERON:0005742,1.58e-07,4;UBERON:0005734,1.58e-07,4;UBERON:0004664,1.58e-07,4;UBERON:0004663,1.58e-07,4;UBERON:0007195,2.31e-07,1;UBERON:0002506,3.17e-07,1;UBERON:0001769,3.17e-07,1;UBERON:0000488,3.60e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.247532705920093,0,0.672325146451775,0,1.46062018077475,0,0.246242116153576,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,2.43806866313962,0,0.767175371061182,0,0,0,0,0,0.378139268656271,1.99556457716308,0.87834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0,0,0.419499436209906,0.550236083880135,0.626984899610432,1.03366703667732,0,2.34304428935269,0.402829317109147,0,0.732186172644509,0,0.81014194788176,0.535798369704479,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.759783069987479,1.85372853138506,2.0078563452417,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0.653847612453835,0,0.576175924479999,0.234321431833797,0,0,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,0.358779271377724,0,0.423863802319124,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,1.18143432568886,0.584622030967192,1.26216887122057,0.0920498986422993,0.161646056818812,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0.435758888184812,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,1.02940686179115,0.109750285408626,0,0.100528972411631,0,0,0,1.44331342025273,0.34779121492523,0.821860859650752,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0.87192013766656,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.887808626565635,0.246381468041427,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0,0,0,0.193341436584244,1.23238893691716,0.614014698904518,0.275673144969061,0.537101224341368,0.145016693914229,0.852266274161009,0.356128142586949,0,0,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0.18532421910392,0.572499546967965,0,1.58189712359363,0.190630193923825,0,0.42793898803392,0,0,0.539617372749944,0,0.589062011728432,0,1.58510321173008,0.421258456238981,0,0,0,0.409499734223957,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.573645408816206,1.08073945114433,0,0.709522128141196,0,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,1.48482340416319,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0,1.59398390600856,0.276283915531148,0,0.613612095012929,0,0.311039587661807,0.179736702294654,0,0,0.690503839458535,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.692552326534174,0.569710279235006,0.23056390438806,0,0.325942115766024,0.957003479195758,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,1.22206028986725,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,1.19472429772959,0.284609546029793,0.416024019039416,0,0.0979923974143777,0.261177619741208,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0.822251547880505,0.397429223405979,0,0.586654148204409,0.240476460754601,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.543616824294456,0.104602846312333,0.305994652908965,0.288950589901519,0,0,0,1.28929632425987,0,0,0.916641696046735,0,0.599037001496973,0.429226048136571,1.11585728720936,2.75452237195578,0,0,0.315132729228895,0,0.26961417541674,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.394028536495991,0.419636705079985,0,0,0.383830394638891,0,1.32418394073086,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0,0,0.121792598380896,0,0,0.2506898940227,0.919036730290385,1.31149052283922,0.157054096250234,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0.606596470166591,0.570930667089935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| |||
|short_description=p9@PHLDB2 | |||
}} |
Revision as of 20:43, 12 September 2013
Short description: | p9@PHLDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PHLDB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393925_5end |
EntrezGene: | PHLDB2 |
HGNC: | 29573 |
UniProt: | Q86SQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 1.39e-07 | 1 |
granulosa cell | 1.39e-07 | 1 |
fibroblast of tunica adventitia of artery | 1.58e-07 | 4 |
fibroblast of the aortic adventitia | 1.58e-07 | 4 |
pigment cell (sensu Vertebrata) | 3.17e-07 | 1 |
iris pigment epithelial cell | 3.17e-07 | 1 |
cardiac mesenchymal cell | 3.38e-07 | 4 |
migratory trunk neural crest cell | 3.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 1.15e-14 | 112 |
cardiovascular system | 2.18e-13 | 109 |
primary circulatory organ | 9.22e-11 | 27 |
vasculature | 1.93e-09 | 78 |
vascular system | 1.93e-09 | 78 |
heart | 3.68e-09 | 24 |
primitive heart tube | 3.68e-09 | 24 |
primary heart field | 3.68e-09 | 24 |
anterior lateral plate mesoderm | 3.68e-09 | 24 |
heart tube | 3.68e-09 | 24 |
heart primordium | 3.68e-09 | 24 |
cardiac mesoderm | 3.68e-09 | 24 |
cardiogenic plate | 3.68e-09 | 24 |
heart rudiment | 3.68e-09 | 24 |
splanchnic layer of lateral plate mesoderm | 7.83e-09 | 83 |
heart left ventricle | 1.22e-07 | 1 |
cardiac ventricle | 1.22e-07 | 1 |
future cardiac ventricle | 1.22e-07 | 1 |
aorta | 1.46e-07 | 21 |
aortic system | 1.46e-07 | 21 |
artery wall | 1.58e-07 | 4 |
tunica adventitia of artery | 1.58e-07 | 4 |
adventitia | 1.58e-07 | 4 |
tunica adventitia of blood vessel | 1.58e-07 | 4 |
aorta tunica adventitia | 1.58e-07 | 4 |
aorta wall | 1.58e-07 | 4 |
stroma of bone marrow | 2.31e-07 | 1 |
iris epithelium | 3.17e-07 | 1 |
iris | 3.17e-07 | 1 |
atypical epithelium | 3.60e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.