FFCP PHASE1:Mm9::chr11:69183184..69183208,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216848|HGNC=|MCL_coexpression_id=2|UniProt=E9Q614,B1AR17|association_with_transcript=-256bp_to_ENSMUST00000092971,uc007jpy.1_5end|description=CAGE_peak_5_at_Chd3_5end|id=chr11:69183184..69183208,-|ontology_enrichment_celltype=CL:0000117!4.09e-08!23;CL:0000337!4.09e-08!23|ontology_enrichment_celltype_v019_2=CL:0002610,5.12e-08,3;CL:0002609,7.26e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!5.98e-16!39;UBERON:0001890!5.98e-16!39;UBERON:0006240!5.98e-16!39;UBERON:0003080!9.79e-16!40;UBERON:0000955!1.86e-15!50;UBERON:0006238!1.86e-15!50;UBERON:0002616!7.97e-15!49;UBERON:0002020!9.32e-15!34;UBERON:0002791!7.03e-14!29;UBERON:0003528!7.03e-14!29;UBERON:0001893!7.03e-14!29;UBERON:0001049!1.77e-13!52;UBERON:0005068!1.77e-13!52;UBERON:0006241!1.77e-13!52;UBERON:0007135!1.77e-13!52;UBERON:0003056!2.55e-13!49;UBERON:0000033!8.01e-12!63;UBERON:0000956!9.99e-12!21;UBERON:0001869!9.99e-12!21;UBERON:0000203!9.99e-12!21;UBERON:0001017!1.81e-10!73;UBERON:0005743!1.81e-10!73;UBERON:0000073!1.21e-09!75;UBERON:0001016!1.21e-09!75;UBERON:0000153!1.72e-09!94;UBERON:0002346!1.75e-09!71;UBERON:0003075!1.75e-09!71;UBERON:0007284!1.75e-09!71;UBERON:0002619!3.84e-09!17;UBERON:0002021!5.46e-09!10;UBERON:0000411!5.46e-09!10;UBERON:0001950!5.46e-09!10;UBERON:0004121!5.77e-08!102;UBERON:0000924!5.77e-08!102;UBERON:0006601!5.77e-08!102;UBERON:0007811!6.15e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.24e-30,21;UBERON:0001869,1.24e-30,21;UBERON:0000203,1.24e-30,21;UBERON:0002021,2.19e-27,10;UBERON:0000411,2.19e-27,10;UBERON:0001950,2.19e-27,10;UBERON:0003528,6.51e-27,29;UBERON:0002791,6.51e-27,29;UBERON:0001893,6.51e-27,29;UBERON:0002780,1.10e-23,39;UBERON:0001890,1.10e-23,39;UBERON:0006240,1.10e-23,39;UBERON:0003080,5.62e-23,40;UBERON:0002020,2.49e-22,34;UBERON:0002619,5.70e-22,17;UBERON:0000073,1.67e-21,54;UBERON:0000955,5.53e-21,47;UBERON:0006238,5.53e-21,47;UBERON:0002616,2.27e-19,46;UBERON:0003056,6.73e-18,49;UBERON:0001017,1.22e-17,73;UBERON:0001016,5.07e-17,75;UBERON:0001049,1.35e-16,52;UBERON:0005068,1.35e-16,52;UBERON:0006241,1.35e-16,52;UBERON:0007135,1.35e-16,52;UBERON:0002346,1.28e-12,64;UBERON:0003075,1.28e-12,64;UBERON:0007284,1.28e-12,64;UBERON:0004121,2.91e-12,95;UBERON:0000924,2.91e-12,95;UBERON:0006601,2.91e-12,95;UBERON:0010371,1.69e-10,73;UBERON:0004684,5.12e-08,3;UBERON:0002275,5.12e-08,3;UBERON:0010314,2.10e-07,92|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,2.16009501330705,1.26194976810829,0.285650984403804,0.662605622854841,0.489963196859816,0.766763768145891,2.75765635983006,1.10115880999389,1.65993539510744,1.99688493233117,0.527545150920775,0.457438218012048,0,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,1.37250180845588,1.88481528169297,5.56237824615285,11.5071955798649,0.83115217823824,3.0825839982874,0.407357455401265,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.360124259610698,0.60281927134286,0.136072998302656,0.512454881139399,0,0,0.215567992932842,0.945530400839096,0.703804496655795,1.31517439456545,0.834141747676794,0.348252166522167,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,2.52347938276953,0.720332286654991,0,0,0.853153002140936,1.39342003116263,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,0.379335801906163,0.342745537829186,1.1270773567308,1.01825663922657,0.775809948670503,0.350679099451593,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,1.52770577197669,2.11221223459652,0.670025029767263,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.35163505977661,0.491804836130026,0,0,0,0,0,0,0.283076530788832,0,0,0,1.60660658210904,0,0.712262414669021,0.651547837414304,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0,0.540183282093931,1.16422815404479,0.643011105094777,0,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0.322928853391811,0.2412516997126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| ||
|EntrezGene=216848 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=E9Q614,B1AR17 | |||
|association_with_transcript=-256bp_to_ENSMUST00000092971,uc007jpy.1_5end | |||
|description=CAGE_peak_5_at_Chd3_5end | |||
|id=chr11:69183184..69183208,- | |||
|ontology_enrichment_celltype=CL:0000117!4.09e-08!23;CL:0000337!4.09e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.12e-08,3;CL:0002609,7.26e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!5.98e-16!39;UBERON:0001890!5.98e-16!39;UBERON:0006240!5.98e-16!39;UBERON:0003080!9.79e-16!40;UBERON:0000955!1.86e-15!50;UBERON:0006238!1.86e-15!50;UBERON:0002616!7.97e-15!49;UBERON:0002020!9.32e-15!34;UBERON:0002791!7.03e-14!29;UBERON:0003528!7.03e-14!29;UBERON:0001893!7.03e-14!29;UBERON:0001049!1.77e-13!52;UBERON:0005068!1.77e-13!52;UBERON:0006241!1.77e-13!52;UBERON:0007135!1.77e-13!52;UBERON:0003056!2.55e-13!49;UBERON:0000033!8.01e-12!63;UBERON:0000956!9.99e-12!21;UBERON:0001869!9.99e-12!21;UBERON:0000203!9.99e-12!21;UBERON:0001017!1.81e-10!73;UBERON:0005743!1.81e-10!73;UBERON:0000073!1.21e-09!75;UBERON:0001016!1.21e-09!75;UBERON:0000153!1.72e-09!94;UBERON:0002346!1.75e-09!71;UBERON:0003075!1.75e-09!71;UBERON:0007284!1.75e-09!71;UBERON:0002619!3.84e-09!17;UBERON:0002021!5.46e-09!10;UBERON:0000411!5.46e-09!10;UBERON:0001950!5.46e-09!10;UBERON:0004121!5.77e-08!102;UBERON:0000924!5.77e-08!102;UBERON:0006601!5.77e-08!102;UBERON:0007811!6.15e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.24e-30,21;UBERON:0001869,1.24e-30,21;UBERON:0000203,1.24e-30,21;UBERON:0002021,2.19e-27,10;UBERON:0000411,2.19e-27,10;UBERON:0001950,2.19e-27,10;UBERON:0003528,6.51e-27,29;UBERON:0002791,6.51e-27,29;UBERON:0001893,6.51e-27,29;UBERON:0002780,1.10e-23,39;UBERON:0001890,1.10e-23,39;UBERON:0006240,1.10e-23,39;UBERON:0003080,5.62e-23,40;UBERON:0002020,2.49e-22,34;UBERON:0002619,5.70e-22,17;UBERON:0000073,1.67e-21,54;UBERON:0000955,5.53e-21,47;UBERON:0006238,5.53e-21,47;UBERON:0002616,2.27e-19,46;UBERON:0003056,6.73e-18,49;UBERON:0001017,1.22e-17,73;UBERON:0001016,5.07e-17,75;UBERON:0001049,1.35e-16,52;UBERON:0005068,1.35e-16,52;UBERON:0006241,1.35e-16,52;UBERON:0007135,1.35e-16,52;UBERON:0002346,1.28e-12,64;UBERON:0003075,1.28e-12,64;UBERON:0007284,1.28e-12,64;UBERON:0004121,2.91e-12,95;UBERON:0000924,2.91e-12,95;UBERON:0006601,2.91e-12,95;UBERON:0010371,1.69e-10,73;UBERON:0004684,5.12e-08,3;UBERON:0002275,5.12e-08,3;UBERON:0010314,2.10e-07,92 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,2.16009501330705,1.26194976810829,0.285650984403804,0.662605622854841,0.489963196859816,0.766763768145891,2.75765635983006,1.10115880999389,1.65993539510744,1.99688493233117,0.527545150920775,0.457438218012048,0,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,1.37250180845588,1.88481528169297,5.56237824615285,11.5071955798649,0.83115217823824,3.0825839982874,0.407357455401265,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.360124259610698,0.60281927134286,0.136072998302656,0.512454881139399,0,0,0.215567992932842,0.945530400839096,0.703804496655795,1.31517439456545,0.834141747676794,0.348252166522167,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,2.52347938276953,0.720332286654991,0,0,0.853153002140936,1.39342003116263,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,0.379335801906163,0.342745537829186,1.1270773567308,1.01825663922657,0.775809948670503,0.350679099451593,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,1.52770577197669,2.11221223459652,0.670025029767263,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.35163505977661,0.491804836130026,0,0,0,0,0,0,0.283076530788832,0,0,0,1.60660658210904,0,0.712262414669021,0.651547837414304,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0,0.540183282093931,1.16422815404479,0.643011105094777,0,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,0.291480836629851,0,0.170870880797853,1.44470807574256,0.185194527369712,0,0.410082683163076,0,0,0,0,0,1.26534397432454,0.609958401380546,0.540026704109006,0.836353184057875,0.218362563746178,0.404593039154462,0,0,0,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.516639293910924,0.168956125490778,0.234714477291508,0.39061315453185,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0.718976700153791,0.389762468933385,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,7.34177395402186,5.9842280745933,6.30185064783336,10.8267504876523,3.42541259885321,6.7985450765073,4.05013500139084,4.05289082901798,2.71885445390523,3.62432218226274,0.415149390336707,0,0.170733605754134,0.729320151204882,0,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.128050304809739,0.402048282689293,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.436039249896986,0.658765662907314,0.423073039458382,0.73171189149109,0,0.407412341537585,0,0.474540072496697,0,0.409231043169689,0.464810523557898,0.192906610981141,1.49886346762768,0,0.859484216193193,0.191288332068843,0,0 | |||
|short_description=p5@Chd3 | |||
}} |
Revision as of 20:34, 12 September 2013
Short description: | p5@Chd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Chd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -256bp_to_ENSMUST00000092971, uc007jpy.1_5end |
EntrezGene: | Chd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.12e-08 | 3 |
neuron of cerebral cortex | 7.26e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.