FFCP PHASE1:Mm9::chr11:67063506..67063515,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=14|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:67063506..67063515,+|id=chr11:67063506..67063515,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005418!8.04e-21!5;UBERON:0002472!8.04e-21!5;UBERON:0008784!8.04e-21!5;UBERON:0006058!8.04e-21!5;UBERON:0004709!8.04e-21!5;UBERON:0005420!8.04e-21!5;UBERON:0006057!8.04e-21!5;UBERON:0000978!8.04e-21!5;UBERON:0002103!8.04e-21!5;UBERON:0000376!8.04e-21!5;UBERON:0000154!8.04e-21!5;UBERON:0005730!8.04e-21!5;UBERON:0002529!2.08e-17!6;UBERON:0000981!7.90e-15!4;UBERON:0002495!7.90e-15!4;UBERON:0003608!7.90e-15!4;UBERON:0003826!7.90e-15!4;UBERON:0008202!7.90e-15!4;UBERON:0004375!7.90e-15!4;UBERON:0002428!7.90e-15!4;UBERON:0003464!7.90e-15!4;UBERON:0003606!7.90e-15!4;UBERON:0009749!7.90e-15!4;UBERON:0003860!7.90e-15!4;UBERON:0005856!7.90e-15!4;UBERON:0005866!7.90e-15!4;UBERON:0007828!7.90e-15!4;UBERON:0005254!7.90e-15!4;UBERON:0001271!7.90e-15!4;UBERON:0002091!7.90e-15!4;UBERON:0001464!7.90e-15!4;UBERON:0003285!7.90e-15!4;UBERON:0010129!7.90e-15!4;UBERON:0006234!7.90e-15!4;UBERON:0007823!5.53e-12!5;UBERON:0000075!4.42e-10!6;UBERON:0003102!8.28e-10!23;UBERON:0000026!3.64e-08!13;UBERON:0004708!3.64e-08!13;UBERON:0002101!3.64e-08!13;UBERON:0004357!3.64e-08!13;UBERON:0009872!3.64e-08!13;UBERON:0004347!3.64e-08!13;UBERON:0005732!3.64e-08!13;UBERON:0005733!3.64e-08!13;UBERON:0001374!4.65e-08!1;UBERON:0001630!4.65e-08!1;UBERON:0004252!4.65e-08!1;UBERON:0003663!4.65e-08!1;UBERON:0001383!4.65e-08!1;UBERON:0005090!4.65e-08!1;UBERON:0003661!4.65e-08!1;UBERON:0001723!5.41e-08!1;UBERON:0001033!5.41e-08!1;UBERON:0010056!5.41e-08!1|ontology_enrichment_uberon_v019_2=UBERON:0001374,5.15e-19,1;UBERON:0004252,5.15e-19,1;UBERON:0003663,5.15e-19,1;UBERON:0005090,5.15e-19,1;UBERON:0001630,5.15e-19,1;UBERON:0003661,5.15e-19,1;UBERON:0010890,5.15e-19,1;UBERON:0001383,5.15e-19,1;UBERON:0001723,7.74e-19,1;UBERON:0001033,7.74e-19,1;UBERON:0010056,7.74e-19,1;UBERON:0005418,4.39e-15,5;UBERON:0002472,4.39e-15,5;UBERON:0008784,4.39e-15,5;UBERON:0006058,4.39e-15,5;UBERON:0004709,4.39e-15,5;UBERON:0002529,4.39e-15,5;UBERON:0010538,4.39e-15,5;UBERON:0005420,4.39e-15,5;UBERON:0010758,4.39e-15,5;UBERON:0000978,4.39e-15,5;UBERON:0002103,4.39e-15,5;UBERON:0000376,4.39e-15,5;UBERON:0000154,4.39e-15,5;UBERON:0010709,4.39e-15,5;UBERON:0005730,4.39e-15,5;UBERON:0000165,4.13e-10,2;UBERON:0000166,4.13e-10,2;UBERON:0000930,4.13e-10,2;UBERON:0003102,5.39e-08,22;UBERON:0000026,7.23e-07,12;UBERON:0004708,7.23e-07,12;UBERON:0002101,7.23e-07,12;UBERON:0004357,7.23e-07,12;UBERON:0004347,7.23e-07,12;UBERON:0005732,7.23e-07,12;UBERON:0005733,7.23e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,1.98757366614354,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.856249869788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843|short_description=p@chr11:67063506..67063515,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:67063506..67063515,+ | |||
|id=chr11:67063506..67063515,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!8.04e-21!5;UBERON:0002472!8.04e-21!5;UBERON:0008784!8.04e-21!5;UBERON:0006058!8.04e-21!5;UBERON:0004709!8.04e-21!5;UBERON:0005420!8.04e-21!5;UBERON:0006057!8.04e-21!5;UBERON:0000978!8.04e-21!5;UBERON:0002103!8.04e-21!5;UBERON:0000376!8.04e-21!5;UBERON:0000154!8.04e-21!5;UBERON:0005730!8.04e-21!5;UBERON:0002529!2.08e-17!6;UBERON:0000981!7.90e-15!4;UBERON:0002495!7.90e-15!4;UBERON:0003608!7.90e-15!4;UBERON:0003826!7.90e-15!4;UBERON:0008202!7.90e-15!4;UBERON:0004375!7.90e-15!4;UBERON:0002428!7.90e-15!4;UBERON:0003464!7.90e-15!4;UBERON:0003606!7.90e-15!4;UBERON:0009749!7.90e-15!4;UBERON:0003860!7.90e-15!4;UBERON:0005856!7.90e-15!4;UBERON:0005866!7.90e-15!4;UBERON:0007828!7.90e-15!4;UBERON:0005254!7.90e-15!4;UBERON:0001271!7.90e-15!4;UBERON:0002091!7.90e-15!4;UBERON:0001464!7.90e-15!4;UBERON:0003285!7.90e-15!4;UBERON:0010129!7.90e-15!4;UBERON:0006234!7.90e-15!4;UBERON:0007823!5.53e-12!5;UBERON:0000075!4.42e-10!6;UBERON:0003102!8.28e-10!23;UBERON:0000026!3.64e-08!13;UBERON:0004708!3.64e-08!13;UBERON:0002101!3.64e-08!13;UBERON:0004357!3.64e-08!13;UBERON:0009872!3.64e-08!13;UBERON:0004347!3.64e-08!13;UBERON:0005732!3.64e-08!13;UBERON:0005733!3.64e-08!13;UBERON:0001374!4.65e-08!1;UBERON:0001630!4.65e-08!1;UBERON:0004252!4.65e-08!1;UBERON:0003663!4.65e-08!1;UBERON:0001383!4.65e-08!1;UBERON:0005090!4.65e-08!1;UBERON:0003661!4.65e-08!1;UBERON:0001723!5.41e-08!1;UBERON:0001033!5.41e-08!1;UBERON:0010056!5.41e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001374,5.15e-19,1;UBERON:0004252,5.15e-19,1;UBERON:0003663,5.15e-19,1;UBERON:0005090,5.15e-19,1;UBERON:0001630,5.15e-19,1;UBERON:0003661,5.15e-19,1;UBERON:0010890,5.15e-19,1;UBERON:0001383,5.15e-19,1;UBERON:0001723,7.74e-19,1;UBERON:0001033,7.74e-19,1;UBERON:0010056,7.74e-19,1;UBERON:0005418,4.39e-15,5;UBERON:0002472,4.39e-15,5;UBERON:0008784,4.39e-15,5;UBERON:0006058,4.39e-15,5;UBERON:0004709,4.39e-15,5;UBERON:0002529,4.39e-15,5;UBERON:0010538,4.39e-15,5;UBERON:0005420,4.39e-15,5;UBERON:0010758,4.39e-15,5;UBERON:0000978,4.39e-15,5;UBERON:0002103,4.39e-15,5;UBERON:0000376,4.39e-15,5;UBERON:0000154,4.39e-15,5;UBERON:0010709,4.39e-15,5;UBERON:0005730,4.39e-15,5;UBERON:0000165,4.13e-10,2;UBERON:0000166,4.13e-10,2;UBERON:0000930,4.13e-10,2;UBERON:0003102,5.39e-08,22;UBERON:0000026,7.23e-07,12;UBERON:0004708,7.23e-07,12;UBERON:0002101,7.23e-07,12;UBERON:0004357,7.23e-07,12;UBERON:0004347,7.23e-07,12;UBERON:0005732,7.23e-07,12;UBERON:0005733,7.23e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,1.98757366614354,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.856249869788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr11:67063506..67063515,+ | |||
}} |
Revision as of 20:26, 12 September 2013
Short description: | p@chr11:67063506..67063515, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:67063506..67063515, + |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
biceps femoris | 5.15e-19 | 1 |
hindlimb stylopod muscle | 5.15e-19 | 1 |
hindlimb muscle | 5.15e-19 | 1 |
muscle structure | 5.15e-19 | 1 |
muscle organ | 5.15e-19 | 1 |
limb muscle | 5.15e-19 | 1 |
pelvic complex muscle | 5.15e-19 | 1 |
muscle of leg | 5.15e-19 | 1 |
tongue | 7.74e-19 | 1 |
gustatory system | 7.74e-19 | 1 |
future tongue | 7.74e-19 | 1 |
hindlimb bud | 4.39e-15 | 5 |
stylopod | 4.39e-15 | 5 |
lower limb segment | 4.39e-15 | 5 |
multi-limb segment region | 4.39e-15 | 5 |
pelvic appendage | 4.39e-15 | 5 |
limb segment | 4.39e-15 | 5 |
paired limb/fin segment | 4.39e-15 | 5 |
pelvic appendage bud | 4.39e-15 | 5 |
subdivision of organism along appendicular axis | 4.39e-15 | 5 |
leg | 4.39e-15 | 5 |
hindlimb | 4.39e-15 | 5 |
hindlimb stylopod | 4.39e-15 | 5 |
posterior region of body | 4.39e-15 | 5 |
pelvic complex | 4.39e-15 | 5 |
hindlimb/pelvic fin field | 4.39e-15 | 5 |
mouth | 4.13e-10 | 2 |
oral opening | 4.13e-10 | 2 |
stomodeum | 4.13e-10 | 2 |
surface structure | 5.39e-08 | 22 |
appendage | 7.23e-07 | 12 |
paired limb/fin | 7.23e-07 | 12 |
limb | 7.23e-07 | 12 |
paired limb/fin bud | 7.23e-07 | 12 |
limb bud | 7.23e-07 | 12 |
limb/fin field | 7.23e-07 | 12 |
limb field | 7.23e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.