FFCP PHASE1:Hg19::chr2:85932253..85932262,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C408|description=CAGE_peak_at_chr2:85932253..85932262,+|id=chr2:85932253..85932262,+|ontology_enrichment_celltype=CL:0002393!7.90e-44!9;CL:0002397!7.90e-44!9;CL:0000767!9.59e-26!3;CL:0002057!1.19e-25!42;CL:0000842!1.96e-24!3;CL:0000738!4.87e-24!140;CL:0000860!8.37e-24!45;CL:0000766!4.42e-21!76;CL:0002087!9.44e-21!119;CL:0000037!6.40e-19!172;CL:0000566!6.40e-19!172;CL:0000224!1.72e-18!4;CL:0000988!1.10e-17!182;CL:0002194!4.00e-16!63;CL:0000576!4.00e-16!63;CL:0000040!4.00e-16!63;CL:0000559!4.00e-16!63;CL:0002009!1.42e-15!65;CL:0000839!2.49e-14!70;CL:0002032!3.25e-14!165;CL:0000837!3.25e-14!165;CL:0000557!4.21e-14!71;CL:0002031!1.57e-13!124;CL:0000763!1.69e-13!112;CL:0000049!1.69e-13!112;CL:0000080!1.60e-12!6;CL:0000875!6.04e-12!3;CL:0002396!6.04e-12!3;CL:0000623!1.59e-11!3;CL:0000825!1.59e-11!3;CL:0000094!5.31e-10!8;CL:0000081!2.14e-07!11;CL:0000134!3.80e-07!358;CL:0002320!6.20e-07!365|ontology_enrichment_celltype_v019=CL:0000767;5.20e-118;3!CL:0000094;5.04e-45;8!CL:0000081;4.79e-33;11!CL:0002393;3.11e-27;6!CL:0002397;3.11e-27;6!CL:0000766;2.46e-08;69|ontology_enrichment_celltype_v019_2=CL:0000767,7.78e-118,3;CL:0000094,5.86e-45,8;CL:0000081,5.35e-33,11;CL:0002393,1.35e-18,9;CL:0002397,1.35e-18,9;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0000738,7.64e-08,136|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.80e-15!102;UBERON:0003061!6.80e-15!102;UBERON:0002193!2.46e-13!112;UBERON:0002371!2.65e-12!80;UBERON:0001474!2.60e-11!86;UBERON:0004765!2.42e-09!101;UBERON:0001434!2.42e-09!101;UBERON:0002405!5.78e-08!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,6.34746105595912,0,0,0,0,0,0,0,0.401088894940283,1.73608696572681,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.633765858935825,0.212604299965044,1.46761051855863,0,0.300353785683013,0.16072558669708,0.570025487482497,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:85932253..85932262,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C408 | |||
|description=CAGE_peak_at_chr2:85932253..85932262,+ | |||
|id=chr2:85932253..85932262,+ | |||
|ontology_enrichment_celltype=CL:0002393!7.90e-44!9;CL:0002397!7.90e-44!9;CL:0000767!9.59e-26!3;CL:0002057!1.19e-25!42;CL:0000842!1.96e-24!3;CL:0000738!4.87e-24!140;CL:0000860!8.37e-24!45;CL:0000766!4.42e-21!76;CL:0002087!9.44e-21!119;CL:0000037!6.40e-19!172;CL:0000566!6.40e-19!172;CL:0000224!1.72e-18!4;CL:0000988!1.10e-17!182;CL:0002194!4.00e-16!63;CL:0000576!4.00e-16!63;CL:0000040!4.00e-16!63;CL:0000559!4.00e-16!63;CL:0002009!1.42e-15!65;CL:0000839!2.49e-14!70;CL:0002032!3.25e-14!165;CL:0000837!3.25e-14!165;CL:0000557!4.21e-14!71;CL:0002031!1.57e-13!124;CL:0000763!1.69e-13!112;CL:0000049!1.69e-13!112;CL:0000080!1.60e-12!6;CL:0000875!6.04e-12!3;CL:0002396!6.04e-12!3;CL:0000623!1.59e-11!3;CL:0000825!1.59e-11!3;CL:0000094!5.31e-10!8;CL:0000081!2.14e-07!11;CL:0000134!3.80e-07!358;CL:0002320!6.20e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000767;5.20e-118;3!CL:0000094;5.04e-45;8!CL:0000081;4.79e-33;11!CL:0002393;3.11e-27;6!CL:0002397;3.11e-27;6!CL:0000766;2.46e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,7.78e-118,3;CL:0000094,5.86e-45,8;CL:0000081,5.35e-33,11;CL:0002393,1.35e-18,9;CL:0002397,1.35e-18,9;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.80e-15!102;UBERON:0003061!6.80e-15!102;UBERON:0002193!2.46e-13!112;UBERON:0002371!2.65e-12!80;UBERON:0001474!2.60e-11!86;UBERON:0004765!2.42e-09!101;UBERON:0001434!2.42e-09!101;UBERON:0002405!5.78e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:85932253..85932262,+ | |||
}} |
Revision as of 20:02, 12 September 2013
Short description: | p@chr2:85932253..85932262, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:85932253..85932262, + |
Coexpression cluster: | C408_Basophils_CD14_amniotic_nasal_Natural_mature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 7.78e-118 | 3 |
granulocyte | 5.86e-45 | 8 |
blood cell | 5.35e-33 | 11 |
intermediate monocyte | 1.35e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.35e-18 | 9 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
leukocyte | 7.64e-08 | 136 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.