FFCP PHASE1:Hg19::chr2:85839218..85839255,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10713|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20071|TSSclassifier=S|UniProt=C9J0X5,C9JIU2,B4DHT4|association_with_transcript=0bp_to_ENST00000442708,ENST00000448971,ENST00000450066,ENST00000465282,uc010ysu.1,uc010ysv.1_5end|description=CAGE_peak_3_at_USP39_5end|id=chr2:85839218..85839255,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,1.2846031433459,1.26858963686374,2.00146596706261,1.78784437770915,0.872338524100369,0,0.631719873426831,1.56711376919903,1.22866968250754,1.39560233594486,1.31064823278103,0.791300934685361,1.98026164736075,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.61560529038394,0.612002073732759,3.13454721478088,2.0036519099174,1.36874425072884,1.75759695432724,1.06978768047132,1.06730766284929,0.787107813136792,0.393364276848904,1.53531759238885,1.23852898652861,1.83884244895785,1.8072355126695,2.21852406100073,1.31694240986513,2.98555388223585,1.17440175733939,0.553995408531877,0.601633342410425,0.217010870715852,2.01523926815932,0.647787332037959,1.28787783817093,1.45398238779565,2.26725566213286,1.69808842831471,0.929716147622738,2.46700732813095,2.47765096716083,1.43846196161075,1.0246428261164,1.18241114944293,1.37898272294647,2.5819387343353,0,1.31769637679823,1.09162460023138,2.47195832889593,0.918251677112708,1.92557416245656,0.639337125799041,0.659702600373432,0.797854630486527,2.13112375266347,0.580418477257168,0.56738522469114,2.4912889959823,1.00499466102697,1.5644487552606,1.08594422352558,1.81619850790011,1.47311054395026,1.26584954976354,0.633765858935825,0.637812899895131,1.25795187305026,0.44931452458598,0.450530678524519,0.16072558669708,1.14005097496499,0.39783335439818,2.19196984517561,3.51992488922645,0.546138611262131,0.889509253863555,2.56038133539904,1.60158394814405,2.29900975981793,1.32208974556972,0.954053754535364,0,0,0.382273228125229,0,0,0.526768169550154,0.196709770113833,0,0,0.668745981562712,0,0,0,1.55974639639243,0,0.221533894583621,0,0.384273959177026,0.520237390239513,0.822189523018381,0.552700035571697,0.869409257205157,0.14828656316206,0.535081656179426,0,0.566546713487831,0.383220493601921,0.34362744548263,0.506039384039006,0.637130828648193,1.95325036156926,0.950452044448374,0.451725357233318,0.127986611154418,1.24930726552346,0.473554504088034,0.821127996921047,0.201606743224732,0.534880391567015,0.868946423296794,0,0.670700859703636,1.02290049474824,0.361439152384566,4.51204119572301,1.30361867064741,0,2.91980922181582,1.70162670895322,1.55210578223795,1.14185221401064,1.24430121722827,2.18577172975525,0.370784442784429,0.324547393654683,0.348259474598534,0.531831842075461,1.66943437013739,1.14398982156026,0.371457501329565,1.39133685156694,0,0.347140501607594,0.56530794192401,0,0.550236083880135,1.67195973229448,0.516833518338658,0.71153252537342,1.00416183829401,1.61131726843659,3.80136052859256,0.488124115096339,0.367663080345869,0,0.0892997282840798,1.34717623575702,0.788280363383256,4.5994991239765,2.84779697870439,0.732806975721629,0,0,2.18047026071267,0,0.506522046658319,1.58891016975863,0.286836620748814,0,1.12135520028461,3.20246987189115,1.72667283892012,0.311211035399766,0.67355336034844,0.817309515567294,1.51357427644931,0,3.04617861383936,0.624320153660641,1.71141546463335,0.896692083310806,1.64408298101271,0.647491777472526,1.54495887372473,1.02077085627447,1.71968044236475,1.13658359293342,3.56400857184616,0.989067717114227,1.82032272387605,2.87447256726495,1.68336113954066,1.00094815897571,0.277064115484183,0.877955241761676,0.30648779579902,1.20190447125277,0.453728732640084,0.89694817844431,2.13557388818567,1.90738711043606,0,0.92747276314595,0.257640540045629,1.30281799432113,0.506328996723799,0.487185025805993,0.504867548488229,2.11714766877288,1.13152239773168,0.355009592516614,0.806016785821122,1.52604533079439,0.966304265816484,1.09098448236334,0,0,0.265059536642971,0.580969714347592,0.725627385107593,0.252320850875628,0.72995471815166,0,1.28648187638577,4.14404764057442,1.39310378409594,2.88751792667834,0.354920400119532,0.505754070234305,0.723033089650446,0.772057809126758,0.217879444092406,0.71181185733329,1.34831308160164,0.392442930250692,0,0,0,1.6462960453256,1.47008711385542,0,0,1.77236972004421,0.882926198829301,0.983907508344908,0.343135620597051,0.878002283269004,3.37205259772859,0.603173834469785,1.38882667737794,2.28065813717227,1.03993478527958,0,0.579652024875384,1.29149563659404,1.87676382089396,2.31492756288305,0.190254152234598,3.95102198979638,5.15091697256924,0.492434012174795,1.17002132569619,1.78357394746474,0,1.00789276919316,0.708875486211932,0.626909658919938,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10713 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20071 | |||
|TSSclassifier=S | |||
|UniProt=C9J0X5,C9JIU2,B4DHT4 | |||
|association_with_transcript=0bp_to_ENST00000442708,ENST00000448971,ENST00000450066,ENST00000465282,uc010ysu.1,uc010ysv.1_5end | |||
|description=CAGE_peak_3_at_USP39_5end | |||
|id=chr2:85839218..85839255,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@USP39 | |||
}} |
Revision as of 20:00, 12 September 2013
Short description: | p3@USP39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_USP39_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000442708, ENST00000448971, ENST00000450066, ENST00000465282, uc010ysu.1, uc010ysv.1_5end |
EntrezGene: | USP39 |
HGNC: | 20071 |
UniProt: | C9J0X5C9JIU2B4DHT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.