FFCP PHASE1:Mm9::chr11:5442229..5442246,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104479|HGNC=|UniProt=Q6PB51|association_with_transcript=-9bp_to_NM_134033,uc007hwp.2_5end|description=CAGE_peak_4_at_Ccdc117_5end|id=chr11:5442229..5442246,-|ontology_enrichment_celltype=CL:0000988!1.25e-07!32;CL:0002032!1.25e-07!32;CL:0000037!1.25e-07!32;CL:0000566!1.25e-07!32;CL:0000837!1.25e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,9.34e-09,32;CL:0002032,9.34e-09,32;CL:0000037,9.34e-09,32;CL:0000837,9.34e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.960893082628764,3.14077866875425,1.36499771816861,2.11724947914781,1.50268718983904,3.3575854382378,1.40167584357315,2.7115897922731,1.97104211012333,0.70219357896598,1.36974374580404,1.43589886191606,2.39681021903688,2.44777126773193,1.99865857089398,1.82227740650843,1.39912375625629,1.73504190947031,1.91960207048034,1.27316895539409,1.10556277196391,1.68794617041505,1.82839852397255,0.799962113967033,0.68822784320151,0.57423196411502,1.29228598847722,0.430942465371778,2.28028103347649,1.26015064879965,1.10865255327652,0.635030673459631,1.84519436275371,0,1.73310971850765,1.82858109894342,2.6542016314108,1.67412652294763,0.7813353445238,2.09409497589519,0,2.04913645487534,1.45653105909346,0.629484089877886,0.506884656097573,0.367093504323363,0.782391344348039,0.436050312760893,0,0.194429899074283,1.25987779462826,0,2.68452169692378,2.17608642603403,3.36093799142464,0.514518872071894,0.573066879877513,2.06268836910977,0.606949382578793,1.05798195854407,0,0.677689064138264,0,0.899899717281399,0,1.4209602298922,0,0.384218305321555,0.933206510776299,1.08004750665353,0.841299845405528,0.285650984403804,0.220868540951614,1.10241719293459,1.15014565221884,0,0,0.383062014255563,1.0752457327937,0.923204014111357,0.457438218012048,1.56274011167028,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.854230084794618,0.931997229126503,0.37863096666592,0.0755715601067855,0.869593466105033,3.44169550792555,2.03991400112325,2.15881276655127,1.94932925234301,0,0.983110940922263,0.511290967734173,0.519572009205738,0.35333957451034,0.563373679106722,0,7.64415719119937,0,1.29894624606728,0.506719730950197,0.505524445014783,1.48439043634778,1.29468941823586,0.29688427812965,0.693941307064543,1.21786191324856,1.84492397804847,1.05505848386836,1.52865319276416,1.25666591329675,1.23597483867187,1.73519228303894,0.884610551949874,1.13236794963186,1.76673214768315,0.969750506270444,1.86391761218122,2.34224637609238,1.04723353406728,1.27728527604296,5.51149572727233,3.59941638596045,4.82866862877646,1.19832511523858,0,1.00523481690292,0.695297280769106,0.767146371990992,0.62336413367868,0.486723789203273,1.42575109390443,2.11491850037158,1.0108910337347,2.10441855886474,1.17108398666433,0.689706313300419,0.540186389416048,0.753524089178575,1.36072998302656,1.15302348256365,1.03071897015702,1.81092359517311,1.5089759505299,0.189106080167819,0.879755620819744,1.31517439456545,0.834141747676794,1.74126083261083,0.823128545631774,1.59227413454795,2.80885274925294,2.57347907114715,4.54661599032948,0.207125772535502,0.234526059981096,1.44049649168812,0.473489471170421,0.787056926989615,0.925602677324269,0.465067889500816,1.07309360559848,1.63471479314037,0.329119699826961,0.656669856316381,1.13496333364198,0.877199924551994,0.658650345873152,0.805238512562231,0.420579897128254,0.617427674275707,0.660837565967596,1.05780226665418,0.853153002140936,0.464473343720877,0.77320476793256,0.80673409849337,0.444756087689741,0.760902504450237,0.949058123089023,1.31759163779209,0.754005626400808,1.98956472041151,0.974820435595601,0,0.648414149624083,2.19055400579804,1.32767530667157,0.456994050438915,1.1270773567308,1.01825663922657,0.775809948670503,1.1221731182451,1.07502113111237,1.18088118383682,1.09899109488962,1.97435462274881,1.1858105083486,0.667380422864376,1.37591296579242,0.674586337154561,1.42002084971952,1.20588579876208,0.25462585178142,0.863088412352432,0.972811360650212,1.37280706594041,0,0.372140947668503,1.24815069245824,0.757736633841335,1.61457672169721,0.964887042726734,1.29327233116623,1.32643988239339,1.14075483509418,0.509235257325564,0.469380496577004,0.837531287209079,0.714130922658041,2.34160377429359,1.41871629695572,0.664394068946325,1.2756381492599,0.655453258862952,1.89953480052485,1.15719246865209,3.01582567878545,2.71952841909355,1.47529281905711,2.20749397043786,0.642202359951168,1.40654023910644,0.163934945376675,3.28212205365685,0.315508219416257,0.390438744296638,0,0.716906393857656,0.668396022247182,0,0,0.876767573733936,0.790575555893047,1.60660658210904,1.27746076687442,1.24645922567079,0.488660878060728,0.989820737835213,0,0.242780636154981,0.302323556964751,1.69744571780308,1.47650946440386,2.45948118355142,0.516856586336442,0.363533729477506,0.356497378384721,1.58018378967908,0,0,1.36175842301515,0.720244376125241,1.03486947026204,0.214337035031592,0.532020700926821,1.24858172321449,0.493647061806363,1.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| ||
|EntrezGene=104479 | |||
|HGNC= | |||
|UniProt=Q6PB51 | |||
|association_with_transcript=-9bp_to_NM_134033,uc007hwp.2_5end | |||
|description=CAGE_peak_4_at_Ccdc117_5end | |||
|id=chr11:5442229..5442246,- | |||
|ontology_enrichment_celltype=CL:0000988!1.25e-07!32;CL:0002032!1.25e-07!32;CL:0000037!1.25e-07!32;CL:0000566!1.25e-07!32;CL:0000837!1.25e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.34e-09,32;CL:0002032,9.34e-09,32;CL:0000037,9.34e-09,32;CL:0000837,9.34e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.960893082628764,3.14077866875425,1.36499771816861,2.11724947914781,1.50268718983904,3.3575854382378,1.40167584357315,2.7115897922731,1.97104211012333,0.70219357896598,1.36974374580404,1.43589886191606,2.39681021903688,2.44777126773193,1.99865857089398,1.82227740650843,1.39912375625629,1.73504190947031,1.91960207048034,1.27316895539409,1.10556277196391,1.68794617041505,1.82839852397255,0.799962113967033,0.68822784320151,0.57423196411502,1.29228598847722,0.430942465371778,2.28028103347649,1.26015064879965,1.10865255327652,0.635030673459631,1.84519436275371,0,1.73310971850765,1.82858109894342,2.6542016314108,1.67412652294763,0.7813353445238,2.09409497589519,0,2.04913645487534,1.45653105909346,0.629484089877886,0.506884656097573,0.367093504323363,0.782391344348039,0.436050312760893,0,0.194429899074283,1.25987779462826,0,2.68452169692378,2.17608642603403,3.36093799142464,0.514518872071894,0.573066879877513,2.06268836910977,0.606949382578793,1.05798195854407,0,0.677689064138264,0,0.899899717281399,0,1.4209602298922,0,0.384218305321555,0.933206510776299,1.08004750665353,0.841299845405528,0.285650984403804,0.220868540951614,1.10241719293459,1.15014565221884,0,0,0.383062014255563,1.0752457327937,0.923204014111357,0.457438218012048,1.56274011167028,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.854230084794618,0.931997229126503,0.37863096666592,0.0755715601067855,0.869593466105033,3.44169550792555,2.03991400112325,2.15881276655127,1.94932925234301,0,0.983110940922263,0.511290967734173,0.519572009205738,0.35333957451034,0.563373679106722,0,7.64415719119937,0,1.29894624606728,0.506719730950197,0.505524445014783,1.48439043634778,1.29468941823586,0.29688427812965,0.693941307064543,1.21786191324856,1.84492397804847,1.05505848386836,1.52865319276416,1.25666591329675,1.23597483867187,1.73519228303894,0.884610551949874,1.13236794963186,1.76673214768315,0.969750506270444,1.86391761218122,2.34224637609238,1.04723353406728,1.27728527604296,5.51149572727233,3.59941638596045,4.82866862877646,1.19832511523858,0,1.00523481690292,0.695297280769106,0.767146371990992,0.62336413367868,0.486723789203273,1.42575109390443,2.11491850037158,1.0108910337347,2.10441855886474,1.17108398666433,0.689706313300419,0.540186389416048,0.753524089178575,1.36072998302656,1.15302348256365,1.03071897015702,1.81092359517311,1.5089759505299,0.189106080167819,0.879755620819744,1.31517439456545,0.834141747676794,1.74126083261083,0.823128545631774,1.59227413454795,2.80885274925294,2.57347907114715,4.54661599032948,0.207125772535502,0.234526059981096,1.44049649168812,0.473489471170421,0.787056926989615,0.925602677324269,0.465067889500816,1.07309360559848,1.63471479314037,0.329119699826961,0.656669856316381,1.13496333364198,0.877199924551994,0.658650345873152,0.805238512562231,0.420579897128254,0.617427674275707,0.660837565967596,1.05780226665418,0.853153002140936,0.464473343720877,0.77320476793256,0.80673409849337,0.444756087689741,0.760902504450237,0.949058123089023,1.31759163779209,0.754005626400808,1.98956472041151,0.974820435595601,0,0.648414149624083,2.19055400579804,1.32767530667157,0.456994050438915,1.1270773567308,1.01825663922657,0.775809948670503,1.1221731182451,1.07502113111237,1.18088118383682,1.09899109488962,1.97435462274881,1.1858105083486,0.667380422864376,1.37591296579242,0.674586337154561,1.42002084971952,1.20588579876208,0.25462585178142,0.863088412352432,0.972811360650212,1.37280706594041,0,0.372140947668503,1.24815069245824,0.757736633841335,1.61457672169721,0.964887042726734,1.29327233116623,1.32643988239339,1.14075483509418,0.509235257325564,0.469380496577004,0.837531287209079,0.714130922658041,2.34160377429359,1.41871629695572,0.664394068946325,1.2756381492599,0.655453258862952,1.89953480052485,1.15719246865209,3.01582567878545,2.71952841909355,1.47529281905711,2.20749397043786,0.642202359951168,1.40654023910644,0.163934945376675,3.28212205365685,0.315508219416257,0.390438744296638,0,0.716906393857656,0.668396022247182,0,0,0.876767573733936,0.790575555893047,1.60660658210904,1.27746076687442,1.24645922567079,0.488660878060728,0.989820737835213,0,0.242780636154981,0.302323556964751,1.69744571780308,1.47650946440386,2.45948118355142,0.516856586336442,0.363533729477506,0.356497378384721,1.58018378967908,0,0,1.36175842301515,0.720244376125241,1.03486947026204,0.214337035031592,0.532020700926821,1.24858172321449,0.493647061806363,1.522324745573,1.17335854031855,2.33015277950202,1.10264199027481,1.81374878235628,1.77610869365496,0.844380948994182,0.477489376012546,0.820704498725306,0.874442509889552,1.66882771809459,0.683483523191411,0.82554747185289,1.29636169158798,0.753473828018764,1.0935538217682,1.60144721244566,3.90950388985867,3.63873776041511,5.8043988997858,0.954670618015114,1.26534397432454,0.406638934253697,1.18805874903981,0.209088296014469,0.218362563746178,1.07891477107857,0.991841468704031,1.04702376793612,1.68499465279331,1.24267862617385,2.81846469342095,1.04661582230785,0.4963754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| |||
|short_description=p4@Ccdc117 | |||
}} | |||
Revision as of 20:00, 12 September 2013
| Short description: | p4@Ccdc117 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Ccdc117_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -9bp_to_NM_134033, uc007hwp.2_5end |
| EntrezGene: | Ccdc117 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 9.34e-09 | 32 |
| hematopoietic oligopotent progenitor cell | 9.34e-09 | 32 |
| hematopoietic stem cell | 9.34e-09 | 32 |
| hematopoietic multipotent progenitor cell | 9.34e-09 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
