FFCP PHASE1:Mm9::chr11:42234760..42234786,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14401|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=0bp_to_ENSMUST00000136050_5end|description=CAGE_peak_1_at_Gabrb2_5end|id=chr11:42234760..42234786,+|ontology_enrichment_celltype=CL:0000117!3.77e-12!23;CL:0000337!3.77e-12!23;CL:0000540!1.87e-07!33;CL:0000047!1.87e-07!33;CL:0000031!1.87e-07!33;CL:0000404!1.87e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.80e-15,23;CL:0000337,5.80e-15,23;CL:0000540,1.52e-08,33;CL:0000047,1.52e-08,33;CL:0000031,1.52e-08,33;CL:0000404,1.52e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.42e-22!63;UBERON:0001049!3.32e-21!52;UBERON:0005068!3.32e-21!52;UBERON:0006241!3.32e-21!52;UBERON:0007135!3.32e-21!52;UBERON:0000955!5.19e-21!50;UBERON:0006238!5.19e-21!50;UBERON:0002616!2.42e-20!49;UBERON:0002346!1.49e-19!71;UBERON:0003075!1.49e-19!71;UBERON:0007284!1.49e-19!71;UBERON:0002020!2.87e-19!34;UBERON:0003056!6.67e-19!49;UBERON:0001017!1.32e-18!73;UBERON:0005743!1.32e-18!73;UBERON:0000073!3.50e-18!75;UBERON:0001016!3.50e-18!75;UBERON:0003080!2.61e-17!40;UBERON:0002791!4.96e-17!29;UBERON:0003528!4.96e-17!29;UBERON:0001893!4.96e-17!29;UBERON:0002780!1.33e-16!39;UBERON:0001890!1.33e-16!39;UBERON:0006240!1.33e-16!39;UBERON:0004121!8.37e-16!102;UBERON:0000924!8.37e-16!102;UBERON:0006601!8.37e-16!102;UBERON:0000956!2.69e-12!21;UBERON:0001869!2.69e-12!21;UBERON:0000203!2.69e-12!21;UBERON:0002619!9.14e-11!17;UBERON:0007811!4.99e-10!86;UBERON:0000153!8.14e-09!94;UBERON:0002021!1.26e-08!10;UBERON:0000411!1.26e-08!10;UBERON:0001950!1.26e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.95e-28,54;UBERON:0001049,2.94e-26,52;UBERON:0005068,2.94e-26,52;UBERON:0006241,2.94e-26,52;UBERON:0007135,2.94e-26,52;UBERON:0002346,5.33e-25,64;UBERON:0003075,5.33e-25,64;UBERON:0007284,5.33e-25,64;UBERON:0002020,5.56e-24,34;UBERON:0000955,2.84e-23,47;UBERON:0006238,2.84e-23,47;UBERON:0001017,1.12e-22,73;UBERON:0002616,1.89e-22,46;UBERON:0003056,1.55e-21,49;UBERON:0001016,1.69e-21,75;UBERON:0003528,3.81e-21,29;UBERON:0002791,3.81e-21,29;UBERON:0001893,3.81e-21,29;UBERON:0003080,9.82e-21,40;UBERON:0010371,3.67e-20,73;UBERON:0002780,7.55e-20,39;UBERON:0001890,7.55e-20,39;UBERON:0006240,7.55e-20,39;UBERON:0004121,7.59e-18,95;UBERON:0000924,7.59e-18,95;UBERON:0006601,7.59e-18,95;UBERON:0000956,3.79e-15,21;UBERON:0001869,3.79e-15,21;UBERON:0000203,3.79e-15,21;UBERON:0002619,3.28e-13,17;UBERON:0010314,4.83e-13,92;UBERON:0002021,1.66e-10,10;UBERON:0000411,1.66e-10,10;UBERON:0001950,1.66e-10,10;UBERON:0002420,3.70e-07,8;UBERON:0007245,3.70e-07,8;UBERON:0010009,3.70e-07,8;UBERON:0010011,3.70e-07,8;UBERON:0000454,3.70e-07,8|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1552597658035,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31811709640683,3.4997381833371,0,0,0,0,0,0,0,0,8.49729135610311,16.9277113367051,6.97214543856797,0,0,0,0,0.7104801149461,0.299600110518405,0,4.76972216618997,3.64516033495565,3.15487442027073,3.14216082844184,4.63823935998388,6.24703075996266,4.69642807989358,1.83843757322004,101.306610519438,82.1029583887757,97.0793290179459,8.04506355154182,9.5147149346506,7.8137005583514,38.2480708631892,54.0252105630413,48.7426410408024,14.4368006882097,11.5321061447273,6.15118171223492,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,2.52799956237153,0,0,0,0.704217098883403,0,0,0,0,0,0,1.82694207550496,0,0,1.04091196059682,0.608930956624282,0,0.452167921657868,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.883366073841574,1.45462575940567,0,114.184510834503,107.027267181676,0,0,0,0,96.4651717767058,64.965085600245,33.5497120141348,95.7772004259443,81.3175154310451,93.0890439626829,78.6870125878625,1.01839363850316,0.124406970610093,0,3.15662783829711,3.513251959993,0.919608417733892,0.180062129805349,1.80845781402858,1.15662048557257,3.33095672740609,2.62364828767241,8.79591460512653,0,0.756424320671277,0.527853372491847,0.876782929710299,0,0,0.61734640922383,0.796137067273973,0,0,0,0.621377317606506,0,0.900310307305074,1.18372367792605,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0,0.134206418760372,62.876694620674,17.5966887168576,0,0,0.853153002140936,1.85789337488351,1.03093969057675,1.4117846723634,0.667134131534611,0.760902504450237,0,0,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,0,0.456994050438915,0,0.407302655690628,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.678980343100753,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0,0.518054945597687,0,0,0,0.983528546038072,0,33.5550733074485,37.1561046497284,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,55.2672664245508,2.2710413633323,1.24645922567079,2.11753047159649,0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| ||
|EntrezGene=14401 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000136050_5end | |||
|description=CAGE_peak_1_at_Gabrb2_5end | |||
|id=chr11:42234760..42234786,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.77e-12!23;CL:0000337!3.77e-12!23;CL:0000540!1.87e-07!33;CL:0000047!1.87e-07!33;CL:0000031!1.87e-07!33;CL:0000404!1.87e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.80e-15,23;CL:0000337,5.80e-15,23;CL:0000540,1.52e-08,33;CL:0000047,1.52e-08,33;CL:0000031,1.52e-08,33;CL:0000404,1.52e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.42e-22!63;UBERON:0001049!3.32e-21!52;UBERON:0005068!3.32e-21!52;UBERON:0006241!3.32e-21!52;UBERON:0007135!3.32e-21!52;UBERON:0000955!5.19e-21!50;UBERON:0006238!5.19e-21!50;UBERON:0002616!2.42e-20!49;UBERON:0002346!1.49e-19!71;UBERON:0003075!1.49e-19!71;UBERON:0007284!1.49e-19!71;UBERON:0002020!2.87e-19!34;UBERON:0003056!6.67e-19!49;UBERON:0001017!1.32e-18!73;UBERON:0005743!1.32e-18!73;UBERON:0000073!3.50e-18!75;UBERON:0001016!3.50e-18!75;UBERON:0003080!2.61e-17!40;UBERON:0002791!4.96e-17!29;UBERON:0003528!4.96e-17!29;UBERON:0001893!4.96e-17!29;UBERON:0002780!1.33e-16!39;UBERON:0001890!1.33e-16!39;UBERON:0006240!1.33e-16!39;UBERON:0004121!8.37e-16!102;UBERON:0000924!8.37e-16!102;UBERON:0006601!8.37e-16!102;UBERON:0000956!2.69e-12!21;UBERON:0001869!2.69e-12!21;UBERON:0000203!2.69e-12!21;UBERON:0002619!9.14e-11!17;UBERON:0007811!4.99e-10!86;UBERON:0000153!8.14e-09!94;UBERON:0002021!1.26e-08!10;UBERON:0000411!1.26e-08!10;UBERON:0001950!1.26e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.95e-28,54;UBERON:0001049,2.94e-26,52;UBERON:0005068,2.94e-26,52;UBERON:0006241,2.94e-26,52;UBERON:0007135,2.94e-26,52;UBERON:0002346,5.33e-25,64;UBERON:0003075,5.33e-25,64;UBERON:0007284,5.33e-25,64;UBERON:0002020,5.56e-24,34;UBERON:0000955,2.84e-23,47;UBERON:0006238,2.84e-23,47;UBERON:0001017,1.12e-22,73;UBERON:0002616,1.89e-22,46;UBERON:0003056,1.55e-21,49;UBERON:0001016,1.69e-21,75;UBERON:0003528,3.81e-21,29;UBERON:0002791,3.81e-21,29;UBERON:0001893,3.81e-21,29;UBERON:0003080,9.82e-21,40;UBERON:0010371,3.67e-20,73;UBERON:0002780,7.55e-20,39;UBERON:0001890,7.55e-20,39;UBERON:0006240,7.55e-20,39;UBERON:0004121,7.59e-18,95;UBERON:0000924,7.59e-18,95;UBERON:0006601,7.59e-18,95;UBERON:0000956,3.79e-15,21;UBERON:0001869,3.79e-15,21;UBERON:0000203,3.79e-15,21;UBERON:0002619,3.28e-13,17;UBERON:0010314,4.83e-13,92;UBERON:0002021,1.66e-10,10;UBERON:0000411,1.66e-10,10;UBERON:0001950,1.66e-10,10;UBERON:0002420,3.70e-07,8;UBERON:0007245,3.70e-07,8;UBERON:0010009,3.70e-07,8;UBERON:0010011,3.70e-07,8;UBERON:0000454,3.70e-07,8 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1552597658035,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31811709640683,3.4997381833371,0,0,0,0,0,0,0,0,8.49729135610311,16.9277113367051,6.97214543856797,0,0,0,0,0.7104801149461,0.299600110518405,0,4.76972216618997,3.64516033495565,3.15487442027073,3.14216082844184,4.63823935998388,6.24703075996266,4.69642807989358,1.83843757322004,101.306610519438,82.1029583887757,97.0793290179459,8.04506355154182,9.5147149346506,7.8137005583514,38.2480708631892,54.0252105630413,48.7426410408024,14.4368006882097,11.5321061447273,6.15118171223492,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,2.52799956237153,0,0,0,0.704217098883403,0,0,0,0,0,0,1.82694207550496,0,0,1.04091196059682,0.608930956624282,0,0.452167921657868,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.883366073841574,1.45462575940567,0,114.184510834503,107.027267181676,0,0,0,0,96.4651717767058,64.965085600245,33.5497120141348,95.7772004259443,81.3175154310451,93.0890439626829,78.6870125878625,1.01839363850316,0.124406970610093,0,3.15662783829711,3.513251959993,0.919608417733892,0.180062129805349,1.80845781402858,1.15662048557257,3.33095672740609,2.62364828767241,8.79591460512653,0,0.756424320671277,0.527853372491847,0.876782929710299,0,0,0.61734640922383,0.796137067273973,0,0,0,0.621377317606506,0,0.900310307305074,1.18372367792605,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0,0.134206418760372,62.876694620674,17.5966887168576,0,0,0.853153002140936,1.85789337488351,1.03093969057675,1.4117846723634,0.667134131534611,0.760902504450237,0,0,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,0,0.456994050438915,0,0.407302655690628,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.678980343100753,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0,0.518054945597687,0,0,0,0.983528546038072,0,33.5550733074485,37.1561046497284,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,55.2672664245508,2.2710413633323,1.24645922567079,2.11753047159649,0.494910368917606,0,1.94224508923985,0.302323556964751,0.565815239267694,0,1.22974059177571,0.516856586336442,1.45413491791002,1.06949213515416,0,0,0,9.19186935535228,1.8006109403131,0,0,1.59606210278046,1.07021290561242,0.658196082408484,0.304464949114599,0,0,0,0,0.484393280087717,0.482503399425247,0,0,0.291480836629851,17.9862542950194,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,2.53068794864908,3.25311147402958,2.80813886136683,3.13632444021703,2.83871332870031,2.15782954215713,1.98368293740806,1.30877970992015,0.259229946583586,0,0,0.149516546043979,1.15820943319968,2.13896307178452,5.16639293910924,7.60302564708502,4.69428954583016,0.781226309063701,0.524296722128554,0,0,0,0.405450430580328,0.718976700153791,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,1.12609485270709,1.83151624267265,0.214368379079066,0,90.9250466613477,104.493828687129,89.9445956099853,82.3176743426264,102.077295445826,103.488963942389,99.2283075340755,124.738973293109,124.614162470656,123.744714508685,0.415149390336707,1.59609949360412,3.24393850932855,4.86213434136588,1.04806581313991,2.94149613520023,5.11167473943715,6.59312183164461,4.1719497246936,5.05394423527595,6.33698249725599,5.47016390019621,5.3375659257833,5.05798703998467,4.7671439233159,4.28664322154766,3.59241410429052,3.6652751888104,2.88460130562315,5.88795680537589,3.42869252385415,3.90446773550542,6.91464950847231,4.36039249896986,4.6113596403512,3.46919892355874,7.3171189149109,5.5244639401947,4.34573164306758,4.48913817326191,2.72860541685601,3.84167481264697,4.09231043169689,4.49316839439301,3.47231899766054,7.74412791607632,4.91256377735358,4.72716318906256,0.956441660344217,1.76473135295612,0.695603506861264 | |||
|short_description=p1@Gabrb2 | |||
}} |
Revision as of 19:39, 12 September 2013
Short description: | p1@Gabrb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabrb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000136050_5end |
EntrezGene: | Gabrb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.80e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.80e-15 | 23 |
neuron | 1.52e-08 | 33 |
neuronal stem cell | 1.52e-08 | 33 |
neuroblast | 1.52e-08 | 33 |
electrically signaling cell | 1.52e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.