FFCP PHASE1:Hg19::chr2:68961905..68961932,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28951|TSSclassifier=S|UniProt=P42331,B7Z498,E9PFQ7|association_with_transcript=0bp_to_ENST00000295381,NM_001007231,NM_001166277_5end|coexpression_cluster_id=C18|description=CAGE_peak_4_at_ARHGAP25_5end|id=chr2:68961905..68961932,+|ontology_enrichment_celltype=CL:0000037!1.07e-73!172;CL:0000566!1.07e-73!172;CL:0002032!6.55e-69!165;CL:0000837!6.55e-69!165;CL:0000738!2.29e-68!140;CL:0000988!1.48e-66!182;CL:0002031!7.91e-62!124;CL:0002087!6.87e-61!119;CL:0000763!2.90e-41!112;CL:0000049!2.90e-41!112;CL:0000839!6.26e-37!70;CL:0000557!1.01e-36!71;CL:0000766!1.29e-36!76;CL:0002194!4.92e-33!63;CL:0000576!4.92e-33!63;CL:0000040!4.92e-33!63;CL:0000559!4.92e-33!63;CL:0002009!1.35e-32!65;CL:0002057!9.58e-27!42;CL:0000860!8.08e-24!45;CL:0000542!1.20e-23!53;CL:0000051!1.20e-23!53;CL:0000838!4.59e-23!52;CL:0000084!1.80e-15!25;CL:0000827!1.80e-15!25;CL:0000791!1.22e-14!18;CL:0000789!1.22e-14!18;CL:0002420!1.22e-14!18;CL:0002419!1.22e-14!18;CL:0000790!1.22e-14!18;CL:0000134!3.68e-11!358;CL:0000625!4.78e-11!11;CL:0002320!3.27e-10!365;CL:0000236!1.23e-09!14;CL:0000945!1.20e-07!24;CL:0000826!1.20e-07!24;CL:0000219!4.53e-07!390|ontology_enrichment_celltype_v019=CL:0000473;1.04e-24;39!CL:0000234;1.04e-24;39!CL:0000576;3.25e-24;48!CL:0000860;7.54e-24;33!CL:0002057;7.54e-24;33!CL:0000766;3.18e-22;69!CL:0002087;6.84e-19;104!CL:0000791;9.62e-19;18!CL:0000789;9.62e-19;18!CL:0002419;9.62e-19;18!CL:0000738;5.46e-18;136!CL:0000084;1.61e-17;25!CL:0000542;5.05e-16;53!CL:0000625;7.54e-14;11!CL:0000763;1.10e-13;100!CL:0000988;1.74e-12;177!CL:0000236;3.90e-10;13!CL:0000451;3.23e-08;10!CL:0000624;5.42e-08;6!CL:0000219;5.63e-08;193!CL:0000235;9.19e-08;6!CL:0000945;1.53e-07;24!CL:0000990;5.02e-07;8|ontology_enrichment_celltype_v019_2=CL:0000738,3.58e-86,136;CL:0000037,2.17e-83,168;CL:0002032,1.47e-78,161;CL:0000837,1.47e-78,161;CL:0002087,3.89e-77,115;CL:0000988,4.83e-77,177;CL:0002031,5.28e-76,120;CL:0000557,2.90e-51,67;CL:0000766,2.98e-51,72;CL:0000839,8.28e-49,66;CL:0000763,7.01e-48,108;CL:0000049,7.01e-48,108;CL:0002194,2.40e-46,59;CL:0000576,2.40e-46,59;CL:0000040,2.40e-46,59;CL:0000559,2.40e-46,59;CL:0002009,8.24e-46,61;CL:0000473,4.49e-39,48;CL:0000234,4.49e-39,48;CL:0000860,8.59e-33,42;CL:0002057,8.59e-33,42;CL:0000542,6.53e-26,53;CL:0000051,6.53e-26,53;CL:0000838,3.53e-25,52;CL:0000134,6.10e-19,354;CL:0000791,9.94e-19,18;CL:0000789,9.94e-19,18;CL:0002420,9.94e-19,18;CL:0002419,9.94e-19,18;CL:0000790,9.94e-19,18;CL:0002320,6.99e-18,361;CL:0000084,1.78e-17,25;CL:0000827,1.78e-17,25;CL:0000219,3.22e-14,386;CL:0000625,7.45e-14,11;CL:0000236,8.13e-11,14;CL:0000048,6.13e-10,427;CL:0000034,7.28e-10,441;CL:0000723,2.26e-09,433;CL:0000451,2.68e-08,10;CL:0002393,5.08e-08,9;CL:0002397,5.08e-08,9;CL:0000624,5.67e-08,6;CL:0000235,1.03e-07,6;CL:0000945,1.35e-07,24;CL:0000826,1.35e-07,24;CL:0000990,4.30e-07,8|ontology_enrichment_development_v019=CL:0002057;1.57e-23;42!CL:0000790;9.62e-19;18!CL:0000051;5.05e-16;53!CL:0000049;4.29e-13;108|ontology_enrichment_disease=DOID:1240!1.93e-07!39;DOID:2531!2.49e-07!51;DOID:0060083!2.49e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.54e-38!102;UBERON:0003061!1.54e-38!102;UBERON:0002193!6.93e-35!112;UBERON:0002371!6.06e-31!80;UBERON:0001474!5.34e-27!86;UBERON:0002405!3.49e-22!115;UBERON:0007023!2.41e-20!115;UBERON:0004765!5.00e-20!101;UBERON:0001434!5.00e-20!101;UBERON:0002384!2.76e-09!375;UBERON:0003081!5.61e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;4.22e-08;15!UBERON:0000179;4.22e-08;15!UBERON:0000463;4.22e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.45e-55,98;UBERON:0003061,5.45e-55,98;UBERON:0002193,8.17e-51,108;UBERON:0002371,3.30e-44,76;UBERON:0002405,5.36e-43,93;UBERON:0001474,2.34e-39,82;UBERON:0004765,6.32e-34,90;UBERON:0001434,2.10e-28,100;UBERON:0002384,6.40e-17,371;UBERON:0003081,2.65e-15,203;UBERON:0002204,6.19e-10,167;UBERON:0000178,4.09e-08,15;UBERON:0000179,4.09e-08,15;UBERON:0000463,4.09e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.96682138424452,3.83829398097213,1.54816123316076,0,0,0,3.17615522379237,1.56386155736164,3.52320527201817,2.21598163412751,2.80762226458198,1.30206522429511,7.3892106499175,20.0814072931767,11.8484761111726,7.70610665531693,7.17964293008738,5.82201746850759,5.57829688573643,5.75635043230556,5.88442104700697,3.74000110018796,5.89169625016932,3.78371567821736,2.41321976515633,0.645484683583826,6.77132432971709,3.01187743268168,3.547779950752,4.04502272001152,5.20342617030534,5.1348644332175,7.03270838378945,6.26717470354761,4.78712778291916,6.81959600852311,2.61188314765726,1.70215567407342,3.11411124497787,5.27622197039161,2.08593167368081,5.86409880703815,6.65939452896706,3.31449872388808,9.49387162322653,4.85887158517466,2.12604299965044,5.03180749220102,4.94245977044578,4.6554836780867,11.893693415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117188958219,0.653150243690884,0,10.9783846413778,1.64961072403156,0,0,0,0,0,0,0.244482888365733,0.406896178315738,1.99727032255654,8.25222553723207,0.961705476909699|short_description=p4@ARHGAP25}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28951 | |||
|TSSclassifier=S | |||
|UniProt=P42331,B7Z498,E9PFQ7 | |||
|association_with_transcript=0bp_to_ENST00000295381,NM_001007231,NM_001166277_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_ARHGAP25_5end | |||
|id=chr2:68961905..68961932,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.07e-73!172;CL:0000566!1.07e-73!172;CL:0002032!6.55e-69!165;CL:0000837!6.55e-69!165;CL:0000738!2.29e-68!140;CL:0000988!1.48e-66!182;CL:0002031!7.91e-62!124;CL:0002087!6.87e-61!119;CL:0000763!2.90e-41!112;CL:0000049!2.90e-41!112;CL:0000839!6.26e-37!70;CL:0000557!1.01e-36!71;CL:0000766!1.29e-36!76;CL:0002194!4.92e-33!63;CL:0000576!4.92e-33!63;CL:0000040!4.92e-33!63;CL:0000559!4.92e-33!63;CL:0002009!1.35e-32!65;CL:0002057!9.58e-27!42;CL:0000860!8.08e-24!45;CL:0000542!1.20e-23!53;CL:0000051!1.20e-23!53;CL:0000838!4.59e-23!52;CL:0000084!1.80e-15!25;CL:0000827!1.80e-15!25;CL:0000791!1.22e-14!18;CL:0000789!1.22e-14!18;CL:0002420!1.22e-14!18;CL:0002419!1.22e-14!18;CL:0000790!1.22e-14!18;CL:0000134!3.68e-11!358;CL:0000625!4.78e-11!11;CL:0002320!3.27e-10!365;CL:0000236!1.23e-09!14;CL:0000945!1.20e-07!24;CL:0000826!1.20e-07!24;CL:0000219!4.53e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.04e-24;39!CL:0000234;1.04e-24;39!CL:0000576;3.25e-24;48!CL:0000860;7.54e-24;33!CL:0002057;7.54e-24;33!CL:0000766;3.18e-22;69!CL:0002087;6.84e-19;104!CL:0000791;9.62e-19;18!CL:0000789;9.62e-19;18!CL:0002419;9.62e-19;18!CL:0000738;5.46e-18;136!CL:0000084;1.61e-17;25!CL:0000542;5.05e-16;53!CL:0000625;7.54e-14;11!CL:0000763;1.10e-13;100!CL:0000988;1.74e-12;177!CL:0000236;3.90e-10;13!CL:0000451;3.23e-08;10!CL:0000624;5.42e-08;6!CL:0000219;5.63e-08;193!CL:0000235;9.19e-08;6!CL:0000945;1.53e-07;24!CL:0000990;5.02e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.58e-86,136;CL:0000037,2.17e-83,168;CL:0002032,1.47e-78,161;CL:0000837,1.47e-78,161;CL:0002087,3.89e-77,115;CL:0000988,4.83e-77,177;CL:0002031,5.28e-76,120;CL:0000557,2.90e-51,67;CL:0000766,2.98e-51,72;CL:0000839,8.28e-49,66;CL:0000763,7.01e-48,108;CL:0000049,7.01e-48,108;CL:0002194,2.40e-46,59;CL:0000576,2.40e-46,59;CL:0000040,2.40e-46,59;CL:0000559,2.40e-46,59;CL:0002009,8.24e-46,61;CL:0000473,4.49e-39,48;CL:0000234,4.49e-39,48;CL:0000860,8.59e-33,42;CL:0002057,8.59e-33,42;CL:0000542,6.53e-26,53;CL:0000051,6.53e-26,53;CL:0000838,3.53e-25,52;CL:0000134,6.10e-19,354;CL:0000791,9.94e-19,18;CL:0000789,9.94e-19,18;CL:0002420,9.94e-19,18;CL:0002419,9.94e-19,18;CL:0000790,9.94e-19,18;CL:0002320,6.99e-18,361;CL:0000084,1.78e-17,25;CL:0000827,1.78e-17,25;CL:0000219,3.22e-14,386;CL:0000625,7.45e-14,11;CL:0000236,8.13e-11,14;CL:0000048,6.13e-10,427;CL:0000034,7.28e-10,441;CL:0000723,2.26e-09,433;CL:0000451,2.68e-08,10;CL:0002393,5.08e-08,9;CL:0002397,5.08e-08,9;CL:0000624,5.67e-08,6;CL:0000235,1.03e-07,6;CL:0000945,1.35e-07,24;CL:0000826,1.35e-07,24;CL:0000990,4.30e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-23;42!CL:0000790;9.62e-19;18!CL:0000051;5.05e-16;53!CL:0000049;4.29e-13;108 | |||
|ontology_enrichment_disease=DOID:1240!1.93e-07!39;DOID:2531!2.49e-07!51;DOID:0060083!2.49e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-38!102;UBERON:0003061!1.54e-38!102;UBERON:0002193!6.93e-35!112;UBERON:0002371!6.06e-31!80;UBERON:0001474!5.34e-27!86;UBERON:0002405!3.49e-22!115;UBERON:0007023!2.41e-20!115;UBERON:0004765!5.00e-20!101;UBERON:0001434!5.00e-20!101;UBERON:0002384!2.76e-09!375;UBERON:0003081!5.61e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.22e-08;15!UBERON:0000179;4.22e-08;15!UBERON:0000463;4.22e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.45e-55,98;UBERON:0003061,5.45e-55,98;UBERON:0002193,8.17e-51,108;UBERON:0002371,3.30e-44,76;UBERON:0002405,5.36e-43,93;UBERON:0001474,2.34e-39,82;UBERON:0004765,6.32e-34,90;UBERON:0001434,2.10e-28,100;UBERON:0002384,6.40e-17,371;UBERON:0003081,2.65e-15,203;UBERON:0002204,6.19e-10,167;UBERON:0000178,4.09e-08,15;UBERON:0000179,4.09e-08,15;UBERON:0000463,4.09e-08,15 | |||
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| |||
|short_description=p4@ARHGAP25 | |||
}} |
Revision as of 19:27, 12 September 2013
Short description: | p4@ARHGAP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ARHGAP25_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000295381, NM_001007231, NM_001166277_5end |
EntrezGene: | ARHGAP25 |
HGNC: | 28951 |
UniProt: | P42331B7Z498E9PFQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.45e-55 | 98 |
blood island | 5.45e-55 | 98 |
hemolymphoid system | 8.17e-51 | 108 |
bone marrow | 3.30e-44 | 76 |
immune system | 5.36e-43 | 93 |
bone element | 2.34e-39 | 82 |
skeletal element | 6.32e-34 | 90 |
skeletal system | 2.10e-28 | 100 |
connective tissue | 6.40e-17 | 371 |
lateral plate mesoderm | 2.65e-15 | 203 |
musculoskeletal system | 6.19e-10 | 167 |
blood | 4.09e-08 | 15 |
haemolymphatic fluid | 4.09e-08 | 15 |
organism substance | 4.09e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.