FFCP PHASE1:Hg19::chr2:65593906..65593917,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=200734|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17722|TSSclassifier=S|UniProt=B3KPL5,E9PEP0,Q7Z698|association_with_transcript=13bp_to_NM_001128210,uc010fcw.2_5end|coexpression_cluster_id=C61|description=CAGE_peak_11_at_SPRED2_5end|id=chr2:65593906..65593917,-|ontology_enrichment_celltype=CL:0000990!3.49e-08!8|ontology_enrichment_celltype_v019=CL:0000453;4.74e-27;5!CL:0002549;2.43e-17;2!CL:0000990;3.91e-15;8!CL:0000451;2.05e-12;10|ontology_enrichment_celltype_v019_2=CL:0000453,4.91e-27,5;CL:0002549,2.65e-17,2;CL:0000990,3.98e-15,8;CL:0000451,2.08e-12,10|ontology_enrichment_development_v019=UBERON:0008425;1.03e-09;1!UBERON:0001045;1.16e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!4.29e-16!22;UBERON:0001950!7.81e-14!20;UBERON:0000956!1.43e-13!25;UBERON:0000203!1.43e-13!25;UBERON:0001893!1.83e-12!34;UBERON:0001869!1.96e-12!32;UBERON:0002791!1.87e-11!33;UBERON:0002020!6.13e-10!34;UBERON:0003528!6.13e-10!34;UBERON:0007023!1.34e-09!115;UBERON:0000200!1.40e-09!6;UBERON:0002616!2.31e-09!59;UBERON:0002780!2.43e-09!41;UBERON:0001890!2.43e-09!41;UBERON:0006240!2.43e-09!41;UBERON:0003080!5.53e-09!42;UBERON:0001049!6.87e-08!57;UBERON:0005068!6.87e-08!57;UBERON:0006241!6.87e-08!57;UBERON:0007135!6.87e-08!57;UBERON:0000955!1.34e-07!69;UBERON:0006238!1.34e-07!69;UBERON:0000153!2.22e-07!129;UBERON:0007811!2.22e-07!129;UBERON:0001017!2.39e-07!82;UBERON:0003056!2.95e-07!61;UBERON:0000033!3.18e-07!123|ontology_enrichment_uberon_v019=UBERON:0002619;1.88e-26;22!UBERON:0000956;2.94e-23;25!UBERON:0000203;2.94e-23;25!UBERON:0001950;6.46e-23;20!UBERON:0001869;4.12e-18;32!UBERON:0001893;4.21e-18;34!UBERON:0005629;2.43e-17;2!UBERON:0005358;2.43e-17;2!UBERON:0001886;2.43e-17;2!UBERON:0004086;2.43e-17;2!UBERON:0005282;2.43e-17;2!UBERON:0005281;2.43e-17;2!UBERON:0002791;1.29e-15;32!UBERON:0003528;1.51e-15;34!UBERON:0002020;1.51e-15;34!UBERON:0002780;8.50e-13;41!UBERON:0001890;8.50e-13;41!UBERON:0001871;1.13e-10;6!UBERON:0001154;1.16e-09;1!UBERON:0001153;1.16e-09;1!UBERON:0009854;1.16e-09;1!UBERON:0001017;3.29e-09;75!UBERON:0002022;3.39e-09;1!UBERON:0002372;3.39e-09;1!UBERON:0001961;3.39e-09;1!UBERON:0001744;3.39e-09;1!UBERON:0007190;3.39e-09;1!UBERON:0001042;3.39e-09;1!UBERON:0001735;3.39e-09;1!UBERON:0000073;6.89e-08;53!UBERON:0002616;6.89e-08;53!UBERON:0001016;1.16e-07;83!UBERON:0005284;1.82e-07;5!UBERON:0002021;2.47e-07;5!UBERON:0000349;2.47e-07;5!UBERON:0000955;9.48e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.16e-26,22;UBERON:0000956,3.33e-23,25;UBERON:0000203,3.33e-23,25;UBERON:0001950,7.18e-23,20;UBERON:0001869,2.90e-22,32;UBERON:0001893,6.64e-21,34;UBERON:0002791,5.17e-18,32;UBERON:0005629,2.65e-17,2;UBERON:0005358,2.65e-17,2;UBERON:0001886,2.65e-17,2;UBERON:0004086,2.65e-17,2;UBERON:0005282,2.65e-17,2;UBERON:0005281,2.65e-17,2;UBERON:0002780,3.65e-17,41;UBERON:0001890,3.65e-17,41;UBERON:0003080,3.65e-17,41;UBERON:0006240,3.65e-17,41;UBERON:0003528,6.54e-17,34;UBERON:0002020,6.54e-17,34;UBERON:0000955,9.50e-17,68;UBERON:0006238,9.50e-17,68;UBERON:0001017,3.89e-16,81;UBERON:0001016,2.58e-14,89;UBERON:0000073,5.27e-13,53;UBERON:0002616,5.27e-13,53;UBERON:0001049,3.08e-12,56;UBERON:0005068,3.08e-12,56;UBERON:0006241,3.08e-12,56;UBERON:0007135,3.08e-12,56;UBERON:0003056,3.99e-11,61;UBERON:0007023,4.42e-11,114;UBERON:0001871,9.43e-11,6;UBERON:0001154,1.12e-09,1;UBERON:0001153,1.12e-09,1;UBERON:0001045,1.12e-09,1;UBERON:0002372,1.99e-09,1;UBERON:0001961,1.99e-09,1;UBERON:0001744,1.99e-09,1;UBERON:0001735,1.99e-09,1;UBERON:0007190,3.00e-09,1;UBERON:0002022,3.83e-09,1;UBERON:0004121,8.78e-09,171;UBERON:0000924,8.78e-09,171;UBERON:0006601,8.78e-09,171;UBERON:0003075,6.47e-08,82;UBERON:0007284,6.47e-08,82;UBERON:0002346,1.76e-07,86;UBERON:0005284,1.88e-07,5;UBERON:0000349,2.59e-07,5;UBERON:0010371,2.70e-07,104;UBERON:0002021,2.94e-07,5|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0.263766978228454,0.123766352960047,0.662794751455832,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0.768482119587302,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.443458794925128,0.263504357079378,0.327447688744282,0,0,0.324547393654683,0.870648686496336,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11900398702904,2.88087962239999,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0.910161361938026,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0.640672166455702,0,0,0,0,0.18611685633159,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=200734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17722 | |||
|TSSclassifier=S | |||
|UniProt=B3KPL5,E9PEP0,Q7Z698 | |||
|association_with_transcript=13bp_to_NM_001128210,uc010fcw.2_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_11_at_SPRED2_5end | |||
|id=chr2:65593906..65593917,- | |||
|ontology_enrichment_celltype=CL:0000990!3.49e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000453;4.74e-27;5!CL:0002549;2.43e-17;2!CL:0000990;3.91e-15;8!CL:0000451;2.05e-12;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.91e-27,5;CL:0002549,2.65e-17,2;CL:0000990,3.98e-15,8;CL:0000451,2.08e-12,10 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.03e-09;1!UBERON:0001045;1.16e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!4.29e-16!22;UBERON:0001950!7.81e-14!20;UBERON:0000956!1.43e-13!25;UBERON:0000203!1.43e-13!25;UBERON:0001893!1.83e-12!34;UBERON:0001869!1.96e-12!32;UBERON:0002791!1.87e-11!33;UBERON:0002020!6.13e-10!34;UBERON:0003528!6.13e-10!34;UBERON:0007023!1.34e-09!115;UBERON:0000200!1.40e-09!6;UBERON:0002616!2.31e-09!59;UBERON:0002780!2.43e-09!41;UBERON:0001890!2.43e-09!41;UBERON:0006240!2.43e-09!41;UBERON:0003080!5.53e-09!42;UBERON:0001049!6.87e-08!57;UBERON:0005068!6.87e-08!57;UBERON:0006241!6.87e-08!57;UBERON:0007135!6.87e-08!57;UBERON:0000955!1.34e-07!69;UBERON:0006238!1.34e-07!69;UBERON:0000153!2.22e-07!129;UBERON:0007811!2.22e-07!129;UBERON:0001017!2.39e-07!82;UBERON:0003056!2.95e-07!61;UBERON:0000033!3.18e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.88e-26;22!UBERON:0000956;2.94e-23;25!UBERON:0000203;2.94e-23;25!UBERON:0001950;6.46e-23;20!UBERON:0001869;4.12e-18;32!UBERON:0001893;4.21e-18;34!UBERON:0005629;2.43e-17;2!UBERON:0005358;2.43e-17;2!UBERON:0001886;2.43e-17;2!UBERON:0004086;2.43e-17;2!UBERON:0005282;2.43e-17;2!UBERON:0005281;2.43e-17;2!UBERON:0002791;1.29e-15;32!UBERON:0003528;1.51e-15;34!UBERON:0002020;1.51e-15;34!UBERON:0002780;8.50e-13;41!UBERON:0001890;8.50e-13;41!UBERON:0001871;1.13e-10;6!UBERON:0001154;1.16e-09;1!UBERON:0001153;1.16e-09;1!UBERON:0009854;1.16e-09;1!UBERON:0001017;3.29e-09;75!UBERON:0002022;3.39e-09;1!UBERON:0002372;3.39e-09;1!UBERON:0001961;3.39e-09;1!UBERON:0001744;3.39e-09;1!UBERON:0007190;3.39e-09;1!UBERON:0001042;3.39e-09;1!UBERON:0001735;3.39e-09;1!UBERON:0000073;6.89e-08;53!UBERON:0002616;6.89e-08;53!UBERON:0001016;1.16e-07;83!UBERON:0005284;1.82e-07;5!UBERON:0002021;2.47e-07;5!UBERON:0000349;2.47e-07;5!UBERON:0000955;9.48e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.16e-26,22;UBERON:0000956,3.33e-23,25;UBERON:0000203,3.33e-23,25;UBERON:0001950,7.18e-23,20;UBERON:0001869,2.90e-22,32;UBERON:0001893,6.64e-21,34;UBERON:0002791,5.17e-18,32;UBERON:0005629,2.65e-17,2;UBERON:0005358,2.65e-17,2;UBERON:0001886,2.65e-17,2;UBERON:0004086,2.65e-17,2;UBERON:0005282,2.65e-17,2;UBERON:0005281,2.65e-17,2;UBERON:0002780,3.65e-17,41;UBERON:0001890,3.65e-17,41;UBERON:0003080,3.65e-17,41;UBERON:0006240,3.65e-17,41;UBERON:0003528,6.54e-17,34;UBERON:0002020,6.54e-17,34;UBERON:0000955,9.50e-17,68;UBERON:0006238,9.50e-17,68;UBERON:0001017,3.89e-16,81;UBERON:0001016,2.58e-14,89;UBERON:0000073,5.27e-13,53;UBERON:0002616,5.27e-13,53;UBERON:0001049,3.08e-12,56;UBERON:0005068,3.08e-12,56;UBERON:0006241,3.08e-12,56;UBERON:0007135,3.08e-12,56;UBERON:0003056,3.99e-11,61;UBERON:0007023,4.42e-11,114;UBERON:0001871,9.43e-11,6;UBERON:0001154,1.12e-09,1;UBERON:0001153,1.12e-09,1;UBERON:0001045,1.12e-09,1;UBERON:0002372,1.99e-09,1;UBERON:0001961,1.99e-09,1;UBERON:0001744,1.99e-09,1;UBERON:0001735,1.99e-09,1;UBERON:0007190,3.00e-09,1;UBERON:0002022,3.83e-09,1;UBERON:0004121,8.78e-09,171;UBERON:0000924,8.78e-09,171;UBERON:0006601,8.78e-09,171;UBERON:0003075,6.47e-08,82;UBERON:0007284,6.47e-08,82;UBERON:0002346,1.76e-07,86;UBERON:0005284,1.88e-07,5;UBERON:0000349,2.59e-07,5;UBERON:0010371,2.70e-07,104;UBERON:0002021,2.94e-07,5 | |||
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|short_description=p11@SPRED2 | |||
}} |
Revision as of 19:21, 12 September 2013
Short description: | p11@SPRED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SPRED2_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 13bp_to_NM_001128210, uc010fcw.2_5end |
EntrezGene: | SPRED2 |
HGNC: | 17722 |
UniProt: | B3KPL5E9PEP0Q7Z698 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.91e-27 | 5 |
fibroblast of choroid plexus | 2.65e-17 | 2 |
conventional dendritic cell | 3.98e-15 | 8 |
dendritic cell | 2.08e-12 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.