FFCP PHASE1:Hg19::chr2:47205307..47205321,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57217|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19750|TSSclassifier=S|UniProt=|association_with_transcript=50bp_to_ENST00000474321_5end|coexpression_cluster_id=C2701|description=CAGE_peak_11_at_TTC7A_5end|id=chr2:47205307..47205321,+|ontology_enrichment_celltype=CL:0000037!3.57e-62!172;CL:0000566!3.57e-62!172;CL:0002087!2.22e-61!119;CL:0000738!1.06e-57!140;CL:0000988!2.36e-57!182;CL:0002032!3.06e-57!165;CL:0000837!3.06e-57!165;CL:0002009!3.42e-56!65;CL:0002194!4.44e-56!63;CL:0000576!4.44e-56!63;CL:0000040!4.44e-56!63;CL:0000559!4.44e-56!63;CL:0000557!1.49e-52!71;CL:0002031!1.84e-52!124;CL:0002057!3.72e-51!42;CL:0000766!1.46e-50!76;CL:0000839!6.44e-49!70;CL:0000763!1.29e-48!112;CL:0000049!1.29e-48!112;CL:0000860!6.97e-47!45;CL:0000945!1.55e-19!24;CL:0000826!1.55e-19!24;CL:0000134!6.56e-17!358;CL:0000236!1.73e-16!14;CL:0002320!3.96e-16!365;CL:0000219!2.11e-13!390;CL:0000048!3.16e-11!430;CL:0000723!9.34e-11!436;CL:0000034!1.19e-10!444;CL:0000542!9.30e-09!53;CL:0000051!9.30e-09!53;CL:0000838!5.23e-08!52;CL:0000840!1.22e-07!5;CL:0001029!1.22e-07!5|ontology_enrichment_celltype_v019=CL:0000860;6.18e-66;33!CL:0002057;6.18e-66;33!CL:0000473;1.53e-45;39!CL:0000234;1.53e-45;39!CL:0000576;1.19e-35;48!CL:0000766;1.36e-25;69!CL:0000763;5.18e-17;100!CL:0002087;9.81e-15;104!CL:0000738;2.16e-11;136!CL:0000236;1.12e-08;13!CL:0000840;6.01e-08;5!CL:0000767;9.34e-07;3|ontology_enrichment_celltype_v019_2=CL:0002194,8.83e-59,59;CL:0000576,8.83e-59,59;CL:0000040,8.83e-59,59;CL:0000559,8.83e-59,59;CL:0002009,1.14e-56,61;CL:0000557,7.74e-55,67;CL:0000766,3.01e-54,72;CL:0000860,4.43e-53,42;CL:0002057,4.43e-53,42;CL:0000839,6.03e-52,66;CL:0000763,1.66e-50,108;CL:0000049,1.66e-50,108;CL:0000473,9.23e-46,48;CL:0000234,9.23e-46,48;CL:0000037,5.18e-45,168;CL:0002032,6.48e-45,161;CL:0000837,6.48e-45,161;CL:0000988,2.49e-42,177;CL:0002087,8.75e-42,115;CL:0002031,9.52e-40,120;CL:0000738,8.61e-39,136;CL:0000134,3.84e-17,354;CL:0002320,1.20e-16,361;CL:0000219,6.51e-15,386;CL:0000048,8.70e-13,427;CL:0000723,1.71e-12,433;CL:0000034,4.10e-12,441;CL:0000236,4.47e-08,14;CL:0000840,5.68e-08,5;CL:0001029,5.68e-08,5;CL:0000817,2.29e-07,3;CL:0000767,8.80e-07,3|ontology_enrichment_development_v019=CL:0002057;5.18e-40;42!CL:0000049;2.18e-18;108|ontology_enrichment_disease=DOID:2531!1.24e-08!51;DOID:0060083!1.24e-08!51|ontology_enrichment_disease_v019=DOID:8692;3.89e-08;31!DOID:1240;6.81e-07;39|ontology_enrichment_disease_v019_2=DOID:2531,9.97e-09,51;DOID:0060083,9.97e-09,51;DOID:8692,3.66e-08,31;DOID:1240,6.06e-08,39|ontology_enrichment_uberon=UBERON:0002371!5.29e-47!80;UBERON:0002390!1.00e-46!102;UBERON:0003061!1.00e-46!102;UBERON:0001474!1.41e-42!86;UBERON:0002193!1.45e-42!112;UBERON:0004765!7.83e-34!101;UBERON:0001434!7.83e-34!101;UBERON:0002405!2.29e-33!115;UBERON:0002204!9.98e-17!167;UBERON:0002384!1.14e-15!375;UBERON:0003081!5.98e-15!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.99e-51,76;UBERON:0001474,7.75e-47,82;UBERON:0004765,4.16e-42,90;UBERON:0002405,1.53e-40,93;UBERON:0002390,3.84e-38,98;UBERON:0003061,3.84e-38,98;UBERON:0001434,3.00e-37,100;UBERON:0002193,5.29e-34,108;UBERON:0002204,1.29e-19,167;UBERON:0002384,5.62e-16,371;UBERON:0003081,6.26e-15,203;UBERON:0000926,3.10e-07,315;UBERON:0004120,3.10e-07,315;UBERON:0006603,3.10e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,1.18009283054671,0.767658796194425,1.39334510984468,0,0,0,0.774672005803016,0.995184627411951,1.17440175733939,0,0.601633342410425,0.868043482863407,0.223915474239924,0.32389366601898,0.257575567634187,4.36194716338694,5.66813915533214,5.09426528494414,0.929716147622738,2.87817521615278,2.78735733805593,0.575384784644301,2.56160706529101,2.36482229888585,1.72372840368309,1.29096936716765,1.35426486594342,3.20011977222428,3.0019676506363,3.37085226667627,1.83650335422542,4.8139354061414,5.11469700639233,3.95821560224059,6.58230070151385,5.11469700639233,0.870627715885752,1.13477044938228,0.622822248995575,0.75374599577023,0.521482918420201,1.08594422352558,0.605399502633369,0.368277635987565,1.58231193720442,0.211255286311942,0,0.209658645508376,1.01095768031846,0.450530678524519,0.803627933485401,0,0,0,3.51992488922645,0.546138611262131,0.889509253863555,0.853460445133014,1.60158394814405,1.14950487990897,0,0.954053754535364,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,3.8945687238562,6.61693001737215,5.05240249971688,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4458934868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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57217 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19750 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=50bp_to_ENST00000474321_5end | |||
|coexpression_cluster_id=C2701 | |||
|description=CAGE_peak_11_at_TTC7A_5end | |||
|id=chr2:47205307..47205321,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.57e-62!172;CL:0000566!3.57e-62!172;CL:0002087!2.22e-61!119;CL:0000738!1.06e-57!140;CL:0000988!2.36e-57!182;CL:0002032!3.06e-57!165;CL:0000837!3.06e-57!165;CL:0002009!3.42e-56!65;CL:0002194!4.44e-56!63;CL:0000576!4.44e-56!63;CL:0000040!4.44e-56!63;CL:0000559!4.44e-56!63;CL:0000557!1.49e-52!71;CL:0002031!1.84e-52!124;CL:0002057!3.72e-51!42;CL:0000766!1.46e-50!76;CL:0000839!6.44e-49!70;CL:0000763!1.29e-48!112;CL:0000049!1.29e-48!112;CL:0000860!6.97e-47!45;CL:0000945!1.55e-19!24;CL:0000826!1.55e-19!24;CL:0000134!6.56e-17!358;CL:0000236!1.73e-16!14;CL:0002320!3.96e-16!365;CL:0000219!2.11e-13!390;CL:0000048!3.16e-11!430;CL:0000723!9.34e-11!436;CL:0000034!1.19e-10!444;CL:0000542!9.30e-09!53;CL:0000051!9.30e-09!53;CL:0000838!5.23e-08!52;CL:0000840!1.22e-07!5;CL:0001029!1.22e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.18e-66;33!CL:0002057;6.18e-66;33!CL:0000473;1.53e-45;39!CL:0000234;1.53e-45;39!CL:0000576;1.19e-35;48!CL:0000766;1.36e-25;69!CL:0000763;5.18e-17;100!CL:0002087;9.81e-15;104!CL:0000738;2.16e-11;136!CL:0000236;1.12e-08;13!CL:0000840;6.01e-08;5!CL:0000767;9.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.83e-59,59;CL:0000576,8.83e-59,59;CL:0000040,8.83e-59,59;CL:0000559,8.83e-59,59;CL:0002009,1.14e-56,61;CL:0000557,7.74e-55,67;CL:0000766,3.01e-54,72;CL:0000860,4.43e-53,42;CL:0002057,4.43e-53,42;CL:0000839,6.03e-52,66;CL:0000763,1.66e-50,108;CL:0000049,1.66e-50,108;CL:0000473,9.23e-46,48;CL:0000234,9.23e-46,48;CL:0000037,5.18e-45,168;CL:0002032,6.48e-45,161;CL:0000837,6.48e-45,161;CL:0000988,2.49e-42,177;CL:0002087,8.75e-42,115;CL:0002031,9.52e-40,120;CL:0000738,8.61e-39,136;CL:0000134,3.84e-17,354;CL:0002320,1.20e-16,361;CL:0000219,6.51e-15,386;CL:0000048,8.70e-13,427;CL:0000723,1.71e-12,433;CL:0000034,4.10e-12,441;CL:0000236,4.47e-08,14;CL:0000840,5.68e-08,5;CL:0001029,5.68e-08,5;CL:0000817,2.29e-07,3;CL:0000767,8.80e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.18e-40;42!CL:0000049;2.18e-18;108 | |||
|ontology_enrichment_disease=DOID:2531!1.24e-08!51;DOID:0060083!1.24e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.89e-08;31!DOID:1240;6.81e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.97e-09,51;DOID:0060083,9.97e-09,51;DOID:8692,3.66e-08,31;DOID:1240,6.06e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.29e-47!80;UBERON:0002390!1.00e-46!102;UBERON:0003061!1.00e-46!102;UBERON:0001474!1.41e-42!86;UBERON:0002193!1.45e-42!112;UBERON:0004765!7.83e-34!101;UBERON:0001434!7.83e-34!101;UBERON:0002405!2.29e-33!115;UBERON:0002204!9.98e-17!167;UBERON:0002384!1.14e-15!375;UBERON:0003081!5.98e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.99e-51,76;UBERON:0001474,7.75e-47,82;UBERON:0004765,4.16e-42,90;UBERON:0002405,1.53e-40,93;UBERON:0002390,3.84e-38,98;UBERON:0003061,3.84e-38,98;UBERON:0001434,3.00e-37,100;UBERON:0002193,5.29e-34,108;UBERON:0002204,1.29e-19,167;UBERON:0002384,5.62e-16,371;UBERON:0003081,6.26e-15,203;UBERON:0000926,3.10e-07,315;UBERON:0004120,3.10e-07,315;UBERON:0006603,3.10e-07,315 | |||
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|short_description=p11@TTC7A | |||
}} |
Revision as of 18:49, 12 September 2013
Short description: | p11@TTC7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_TTC7A_5end |
Coexpression cluster: | C2701_acute_CD14_Dendritic_granulocyte_diffuse_CD19_biphenotypic |
Association with transcript: | 50bp_to_ENST00000474321_5end |
EntrezGene: | TTC7A |
HGNC: | 19750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.99e-51 | 76 |
bone element | 7.75e-47 | 82 |
skeletal element | 4.16e-42 | 90 |
immune system | 1.53e-40 | 93 |
hematopoietic system | 3.84e-38 | 98 |
blood island | 3.84e-38 | 98 |
skeletal system | 3.00e-37 | 100 |
hemolymphoid system | 5.29e-34 | 108 |
musculoskeletal system | 1.29e-19 | 167 |
connective tissue | 5.62e-16 | 371 |
lateral plate mesoderm | 6.26e-15 | 203 |
mesoderm | 3.10e-07 | 315 |
mesoderm-derived structure | 3.10e-07 | 315 |
presumptive mesoderm | 3.10e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.97e-09 | 51 |
immune system cancer | 9.97e-09 | 51 |
myeloid leukemia | 3.66e-08 | 31 |
leukemia | 6.06e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.