Personal tools

FFCP PHASE1:Mm9::chr11:115674877..115674907,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=140721|HGNC=|MCL_coexpression_id=94|UniProt=Q8VHK1|association_with_transcript=0bp_to_NM_080643,uc007mip.1_5end|description=CAGE_peak_1_at_Caskin2_5end|id=chr11:115674877..115674907,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.00e-08!333;UBERON:0000160!5.08e-08!43;UBERON:0005177!1.97e-07!85;UBERON:0005157!3.81e-07!27;UBERON:0002048!4.41e-07!14;UBERON:0000117!4.41e-07!14;UBERON:0000171!4.41e-07!14;UBERON:0000170!4.41e-07!14;UBERON:0005597!4.41e-07!14;UBERON:0000118!4.41e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.62e-08,79;UBERON:0002048,4.36e-07,14;UBERON:0000117,4.36e-07,14;UBERON:0000171,4.36e-07,14;UBERON:0000170,4.36e-07,14;UBERON:0005597,4.36e-07,14;UBERON:0000118,4.36e-07,14|phase1_expression=5.60520964866779,48.8565570695106,34.5799421936047,39.6228116811947,45.0806156951712,7.38668796412315,5.37309073369709,0,0.422366166455,0.234064526321993,0,0,0,0,1.66554880907831,1.41732687172878,0,0.157731082679119,0.411343300817216,0.42438965179803,21.8561255688249,0,0,3.83981814704176,3.44113921600755,22.9692785646008,13.3536218809313,10.7735616342945,25.2731147876977,19.9103802510345,11.9734475753865,5.71527606113668,2.46025915033828,0,4.62162591602039,6.4831511689812,8.98345167554424,0,0,0,0,0,0,7.1761186246079,7.50189291024408,6.05704282133549,10.1710874765245,17.4420125104357,52.2853114908043,38.1082602185596,4.75953833526233,2.87505128729943,0.671130424230945,0.725362142011344,0,3.60163210450326,6.5902691185914,9.7977697532714,7.68802551266472,7.40587370980846,5.70448263155561,6.43804610931351,2.66788438833342,0,3.9554654502679,2.1314403448383,3.59520132622086,8.83702102239575,4.25127410464758,3.24014251996058,2.73422449756797,7.14127461009509,12.589506834242,3.91970557487853,4.60058260887535,7.35375029288017,12.1127469099328,8.2996769755372,9.83081812839958,4.61602007055678,5.30628332893976,5.73004707612436,10.8881369610539,5.06486349028512,11.1542720877071,11.7851434189467,7.26095572075425,5.21918448310842,1.36307147999731,3.17400552448499,126.960646051335,18.0689014166091,10.879541339324,3.77792234146472,7.14754059192436,5.37632264516803,11.3759980306719,1.53387290320252,0.519572009205738,0.35333957451034,12.5350643601246,2.56652954828636,0,0,1.08245520505607,0.253359865475099,0,12.2176751299394,7.76813650941515,36.9620926271414,14.9197381018877,20.3991870469135,23.0615497256059,17.7852715852095,20.9307898701555,24.7563184919461,5.93267922562497,30.7996630239412,7.96149496754887,9.70601099684455,10.6003928860989,10.1823803158397,14.9113408974498,3.51336956413857,5.86450779077674,23.757506134399,0.11981512450592,0,0.127070227073065,12.1330417917906,14.1825186873774,3.26701315493447,6.95297280769106,9.46147192122223,10.1816141834184,10.2211995732687,8.65634592727688,14.3068016201607,21.734157225296,5.6819301089348,6.63614259109789,3.21862946206862,6.30217454318722,7.08312643827861,11.1579858608178,9.48041530107888,8.99536555773397,12.9351685369508,3.88022387279116,7.75334928688059,8.79755620819744,10.0830036916684,10.2877482213471,10.7958171621872,11.1122353660289,12.1410902759281,0,0.257347907114715,0,15.9486844852336,19.2311369184499,11.704033994966,19.4130683179872,20.8570085652248,23.9114024975436,24.6485981435432,25.4859731329638,23.9368951852697,25.013097186849,35.6243397051637,44.7499828693124,41.9593963910704,25.6873634890529,44.2881181909227,12.8276868624118,3.91037527041281,16.1905203662061,17.1892868331304,7.46508876873319,7.43157349953403,8.24751752461397,9.4791256572971,11.1189021922435,11.0330863145284,31.3189180619378,12.3524216043008,13.069430857614,14.523822459004,16.182019230887,23.3693046250098,19.0201483889731,19.1175622324193,13.0870851657626,9.25412952138803,19.1603150644237,12.6263823264095,13.9645790760691,17.4638191526893,26.053453295194,38.231028326717,26.5327850051923,27.5175675545615,12.4510103376603,2.66952169145751,3.14494392181125,3.82265591054251,6.8972441272091,7.95884627182976,5.34714288740982,8.34318798607351,7.7824908852017,6.58947391651396,7.18841032636773,11.1642284300551,16.8500343481863,14.1444171650383,8.07288360848605,10.1313139486307,75.1945483978081,8.14813070613084,10.5927234687317,12.5611363473639,19.2446003596572,24.4559135865051,38.3250261826482,51.1250157387433,45.398921502583,50.0510198606231,46.7202472166437,70.6250886424831,46.27957514006,70.2994424706146,1.50791283939272,0.54390568381871,15.7364567366092,12.9690270763224,10.9174401191699,11.2523219128515,2.13115428989678,16.915552122693,2.83957397474631,3.12350995437311,2.80050417052639,3.58453196928828,3.7875774594007,2.54768877709949,1.21443210502468,3.21481443702443,4.74345333535828,17.0300297703558,11.9229671574946,14.2452482933804,11.2392001953967,19.7964147567043,15.9294166007955,16.5090832585387,11.1859716076958,13.9567759019365,20.6711325016541,17.2163682848599,23.5169746783081,18.1766864738753,15.329387270543,15.1697643809192,17.9211634577498,13.4076206222643,11.9153862013826,8.64293251350289,14.1000965323202,10.502514716548,11.5271151867478,18.5503570306153,14.3157647923845,18.267896946876,10.3255551548033,15.4637411730589,5.73373834942901,8.57408515295696,12.5942252822806,9.04693873922338,9.43041517624778,9.35603128546849,36.7265854153612,12.9797711407357,3.93003025835061,14.4470807574256,12.0376442790313,4.89757988212197,4.23752105935178,4.57556346413045,1.35982743995084,0.69975726161829,0.967399816630967,15.2747298882418,8.06656783631895,9.55601495496189,6.91234181259528,6.27264888043406,9.60795280483181,9.03591120778299,15.2082358534618,15.9671124610258,14.5168770086808,33.552322906694,0,11.9613236835183,11.5820943319968,14.7782903141476,13.0451421712508,9.79945527846513,10.9142231940551,5.33837977860195,3.67007705489988,2.17425708743405,2.88030006257865,1.89606672376907,7.9062833963164,8.11416561602135,4.67714962720062,5.54982756569192,3.57626438606277,1.9231271923195,1.77227432609493,2.1202954489111,1.600342939755,1.61321896218945,1.16949456887703,0.481059208201647,1.63627663054197,13.8305534005279,3.7737612073591,2.9605572681127,4.86865387455827,8.88672132548076,13.1377732815827,13.9195234443121,5.57357785605571,6.01886524842436,12.9892923801925,10.5874804396651,13.7494923225455,9.96748457593388,8.22099023724771,6.0431511791176,8.77529250301348,6.30449684513909,4.53142408984205,5.1776031175182,5.50072942196136,9.97562183502578,5.29274177837816,8.265628380322,9.22297915563122,9.37601893095072,10.6678429344775,14.0103838922448,17.9714757371417,14.1510438587727,12.9274442944022,12.6379648728671,12.4543204934944,11.5885525852813,10.8553036326109,14.7651044297753,13.3266974836584,12.1532808892134,9.89006161927936,11.0399190100798,14.4005086001874,10.6485483695602,13.35242663705,13.9532559967035,13.9281883014689,13.1998788311015,12.8049581010941,10.2597187460759,12.9013908153569,9.53941861818155,13.4057570480317,12.8055827088233,7.7753898202241,12.0850736125053,13.1176495467176,15.7380664100906,12.6323068560521,15.0409737833809,16.4507965579205,15.6619907574856,18.5494268496337|short_description=p1@Caskin2}}
|EntrezGene=140721
|HGNC=
|MCL_coexpression_id=94
|UniProt=Q8VHK1
|association_with_transcript=0bp_to_NM_080643,uc007mip.1_5end
|description=CAGE_peak_1_at_Caskin2_5end
|id=chr11:115674877..115674907,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!4.00e-08!333;UBERON:0000160!5.08e-08!43;UBERON:0005177!1.97e-07!85;UBERON:0005157!3.81e-07!27;UBERON:0002048!4.41e-07!14;UBERON:0000117!4.41e-07!14;UBERON:0000171!4.41e-07!14;UBERON:0000170!4.41e-07!14;UBERON:0005597!4.41e-07!14;UBERON:0000118!4.41e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.62e-08,79;UBERON:0002048,4.36e-07,14;UBERON:0000117,4.36e-07,14;UBERON:0000171,4.36e-07,14;UBERON:0000170,4.36e-07,14;UBERON:0005597,4.36e-07,14;UBERON:0000118,4.36e-07,14
|phase1_expression=5.60520964866779,48.8565570695106,34.5799421936047,39.6228116811947,45.0806156951712,7.38668796412315,5.37309073369709,0,0.422366166455,0.234064526321993,0,0,0,0,1.66554880907831,1.41732687172878,0,0.157731082679119,0.411343300817216,0.42438965179803,21.8561255688249,0,0,3.83981814704176,3.44113921600755,22.9692785646008,13.3536218809313,10.7735616342945,25.2731147876977,19.9103802510345,11.9734475753865,5.71527606113668,2.46025915033828,0,4.62162591602039,6.4831511689812,8.98345167554424,0,0,0,0,0,0,7.1761186246079,7.50189291024408,6.05704282133549,10.1710874765245,17.4420125104357,52.2853114908043,38.1082602185596,4.75953833526233,2.87505128729943,0.671130424230945,0.725362142011344,0,3.60163210450326,6.5902691185914,9.7977697532714,7.68802551266472,7.40587370980846,5.70448263155561,6.43804610931351,2.66788438833342,0,3.9554654502679,2.1314403448383,3.59520132622086,8.83702102239575,4.25127410464758,3.24014251996058,2.73422449756797,7.14127461009509,12.589506834242,3.91970557487853,4.60058260887535,7.35375029288017,12.1127469099328,8.2996769755372,9.83081812839958,4.61602007055678,5.30628332893976,5.73004707612436,10.8881369610539,5.06486349028512,11.1542720877071,11.7851434189467,7.26095572075425,5.21918448310842,1.36307147999731,3.17400552448499,126.960646051335,18.0689014166091,10.879541339324,3.77792234146472,7.14754059192436,5.37632264516803,11.3759980306719,1.53387290320252,0.519572009205738,0.35333957451034,12.5350643601246,2.56652954828636,0,0,1.08245520505607,0.253359865475099,0,12.2176751299394,7.76813650941515,36.9620926271414,14.9197381018877,20.3991870469135,23.0615497256059,17.7852715852095,20.9307898701555,24.7563184919461,5.93267922562497,30.7996630239412,7.96149496754887,9.70601099684455,10.6003928860989,10.1823803158397,14.9113408974498,3.51336956413857,5.86450779077674,23.757506134399,0.11981512450592,0,0.127070227073065,12.1330417917906,14.1825186873774,3.26701315493447,6.95297280769106,9.46147192122223,10.1816141834184,10.2211995732687,8.65634592727688,14.3068016201607,21.734157225296,5.6819301089348,6.63614259109789,3.21862946206862,6.30217454318722,7.08312643827861,11.1579858608178,9.48041530107888,8.99536555773397,12.9351685369508,3.88022387279116,7.75334928688059,8.79755620819744,10.0830036916684,10.2877482213471,10.7958171621872,11.1122353660289,12.1410902759281,0,0.257347907114715,0,15.9486844852336,19.2311369184499,11.704033994966,19.4130683179872,20.8570085652248,23.9114024975436,24.6485981435432,25.4859731329638,23.9368951852697,25.013097186849,35.6243397051637,44.7499828693124,41.9593963910704,25.6873634890529,44.2881181909227,12.8276868624118,3.91037527041281,16.1905203662061,17.1892868331304,7.46508876873319,7.43157349953403,8.24751752461397,9.4791256572971,11.1189021922435,11.0330863145284,31.3189180619378,12.3524216043008,13.069430857614,14.523822459004,16.182019230887,23.3693046250098,19.0201483889731,19.1175622324193,13.0870851657626,9.25412952138803,19.1603150644237,12.6263823264095,13.9645790760691,17.4638191526893,26.053453295194,38.231028326717,26.5327850051923,27.5175675545615,12.4510103376603,2.66952169145751,3.14494392181125,3.82265591054251,6.8972441272091,7.95884627182976,5.34714288740982,8.34318798607351,7.7824908852017,6.58947391651396,7.18841032636773,11.1642284300551,16.8500343481863,14.1444171650383,8.07288360848605,10.1313139486307,75.1945483978081,8.14813070613084,10.5927234687317,12.5611363473639,19.2446003596572,24.4559135865051,38.3250261826482,51.1250157387433,45.398921502583,50.0510198606231,46.7202472166437,70.6250886424831,46.27957514006,70.2994424706146,1.50791283939272,0.54390568381871,15.7364567366092,12.9690270763224,10.9174401191699,11.2523219128515,2.13115428989678,16.915552122693,2.83957397474631,3.12350995437311,2.80050417052639,3.58453196928828,3.7875774594007,2.54768877709949,1.21443210502468,3.21481443702443,4.74345333535828,17.0300297703558,11.9229671574946,14.2452482933804,11.2392001953967,19.7964147567043,15.9294166007955,16.5090832585387,11.1859716076958,13.9567759019365,20.6711325016541,17.2163682848599,23.5169746783081,18.1766864738753,15.329387270543,15.1697643809192,17.9211634577498,13.4076206222643,11.9153862013826,8.64293251350289,14.1000965323202,10.502514716548,11.5271151867478,18.5503570306153,14.3157647923845,18.267896946876,10.3255551548033,15.4637411730589,5.73373834942901,8.57408515295696,12.5942252822806,9.04693873922338,9.43041517624778,9.35603128546849,36.7265854153612,12.9797711407357,3.93003025835061,14.4470807574256,12.0376442790313,4.89757988212197,4.23752105935178,4.57556346413045,1.35982743995084,0.69975726161829,0.967399816630967,15.2747298882418,8.06656783631895,9.55601495496189,6.91234181259528,6.27264888043406,9.60795280483181,9.03591120778299,15.2082358534618,15.9671124610258,14.5168770086808,33.552322906694,0,11.9613236835183,11.5820943319968,14.7782903141476,13.0451421712508,9.79945527846513,10.9142231940551,5.33837977860195,3.67007705489988,2.17425708743405,2.88030006257865,1.89606672376907,7.9062833963164,8.11416561602135,4.67714962720062,5.54982756569192,3.57626438606277,1.9231271923195,1.77227432609493,2.1202954489111,1.600342939755,1.61321896218945,1.16949456887703,0.481059208201647,1.63627663054197,13.8305534005279,3.7737612073591,2.9605572681127,4.86865387455827,8.88672132548076,13.1377732815827,13.9195234443121,5.57357785605571,6.01886524842436,12.9892923801925,10.5874804396651,13.7494923225455,9.96748457593388,8.22099023724771,6.0431511791176,8.77529250301348,6.30449684513909,4.53142408984205,5.1776031175182,5.50072942196136,9.97562183502578,5.29274177837816,8.265628380322,9.22297915563122,9.37601893095072,10.6678429344775,14.0103838922448,17.9714757371417,14.1510438587727,12.9274442944022,12.6379648728671,12.4543204934944,11.5885525852813,10.8553036326109,14.7651044297753,13.3266974836584,12.1532808892134,9.89006161927936,11.0399190100798,14.4005086001874,10.6485483695602,13.35242663705,13.9532559967035,13.9281883014689,13.1998788311015,12.8049581010941,10.2597187460759,12.9013908153569,9.53941861818155,13.4057570480317,12.8055827088233,7.7753898202241,12.0850736125053,13.1176495467176,15.7380664100906,12.6323068560521,15.0409737833809,16.4507965579205,15.6619907574856,18.5494268496337
|short_description=p1@Caskin2
}}

Revision as of 18:47, 12 September 2013

Short description:p1@Caskin2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Caskin2_5end
Coexpression cluster:MCL_coexpression_mm9:94
Association with transcript: 0bp_to_NM_080643, uc007mip.1_5end
EntrezGene:Caskin2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Caskin2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I548.86
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I634.58
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I445.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H922.97
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I210.77
Ileum epithelium, pool1.CNhs13199.10252-104B925.27
Ileum epithelium, pool2.CNhs13232.10253-104C119.91
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B852.29
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C338.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3126.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.22
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D736.96
adrenal gland, embryo E14.CNhs11038.406-44C514.92
adrenal gland, embryo E16.CNhs11004.1254-43D620.40
adrenal gland, embryo E17.CNhs11043.1263-45I123.06
adrenal gland, embryo E18.CNhs11026.1262-18F517.79
adrenal gland, neonate N00.CNhs11191.1311-23C120.93
adrenal gland, neonate N25.CNhs11223.1377-27I324.76
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H130.80
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F59.71
bone (os femoris), neonate N16.CNhs11225.1525-43A610.60
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H723.76
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B210.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.31
epididymis, adult.CNhs10490.58-23B221.73
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C611.16
eyeball, neonate N01.CNhs11140.1532-43E79.48
eyeball, neonate N02.CNhs11205.1551-44G89.00
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E28.80
forelimb, embryo E14.CNhs10577.413-26A810.08
forelimb, embryo E15.CNhs11007.437-20E710.29
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B511.11
gonad, embryo E13.CNhs11044.1564-45I612.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E915.95
heart, embryo E12.CNhs11015.353-12F519.23
heart, embryo E13.CNhs11013.376-3I911.70
heart, embryo E14.CNhs10597.403-26D419.41
heart, embryo E15.CNhs11017.431-16C820.86
heart, embryo E16.CNhs11021.457-17C623.91
heart, embryo E17.CNhs11025.479-18E524.65
heart, embryo E18.CNhs11030.1283-20G325.49
heart, neonate N00.CNhs11213.639-21E323.94
heart, neonate N03.CNhs11221.1349-25I225.01
heart, neonate N10.CNhs11118.749-24G135.62
heart, neonate N16.CNhs11209.782-15G144.75
heart, neonate N20.CNhs11127.821-26I641.96
heart, neonate N25.CNhs11196.1351-25D325.69
heart, neonate N30.CNhs11202.1390-42D244.29
hippocampus, adult.CNhs10478.13-16E812.83
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I316.19
intestine, adult.CNhs10496.178-9A317.19
intestine, embryo E12.CNhs11019.1251-16I57.47
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D88.25
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F711.03
intestine, neonate N00.CNhs11126.644-26D131.32
intestine, neonate N01.CNhs11192.1322-23E912.35
intestine, neonate N06.CNhs11102.688-20B813.07
intestine, neonate N07.CNhs11095.720-20F214.52
intestine, neonate N10.CNhs11098.755-23A516.18
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E319.02
intestine, neonate N30.CNhs11131.1384-42G119.12
kidney, embryo E14.CNhs10606.411-4I913.09
kidney, embryo E15.CNhs10997.434-16F89.25
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I212.63
kidney, embryo E18.CNhs11001.1288-20C713.96
kidney, neonate N00.CNhs11214.646-21G717.46
kidney, neonate N10.CNhs11206.758-6D526.05
kidney, neonate N20.CNhs11113.832-19I138.23
kidney, neonate N25.CNhs11122.1353-25F326.53
kidney, neonate N30.CNhs11203.1385-42H127.52
liver, adult pregnant day01.CNhs10466.508-5B212.45
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F47.78
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H211.16
liver, neonate N10.CNhs11115.751-24B916.85
liver, neonate N20.CNhs11220.823-25A314.14
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B175.19
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F810.59
lung, embryo E15.CNhs11020.432-17C512.56
lung, embryo E16.CNhs10998.458-17B619.24
lung, embryo E17.CNhs10605.480-44A624.46
lung, embryo E18.CNhs10583.1287-20I638.33
lung, neonate N00.CNhs11224.640-42C651.13
lung, neonate N06.CNhs11212.683-20E545.40
lung, neonate N07.CNhs11111.715-19A350.05
lung, neonate N10.CNhs11219.750-23E646.72
lung, neonate N20.CNhs11109.822-18A470.63
lung, neonate N25.CNhs11119.1359-25C746.28
lung, neonate N30.CNhs11133.1394-42H270.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H212.97
medulla oblongata, adult.CNhs10477.17-12C210.92
medulla oblongata, neonate N30.CNhs11200.1396-42A311.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.92
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I711.92
ovary, embryo E18.CNhs11040.505-44H714.25
ovary, neonate N00.CNhs11217.1299-22I411.24
oviduct, adult pregnant day01.CNhs10500.988-6G619.80
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E513.96
pancreas, embryo E17.CNhs10599.1558-45G320.67
pancreas, embryo E18.CNhs10580.1535-43I717.22
pancreas, neonate N00.CNhs11105.645-26G923.52
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B615.17
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C714.10
pituitary gland, embryo E14.CNhs11037.398-44A510.50
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F618.55
pituitary gland, embryo E17.CNhs11039.1265-44F514.32
pituitary gland, neonate N00.CNhs11190.1308-22E918.27
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G315.46
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C38.57
skin, neonate N00.CNhs11124.650-25G412.59
skin, neonate N03.CNhs11215.662-22H39.05
skin, neonate N06.CNhs11097.693-20I59.43
skin, neonate N10.CNhs11108.762-6C49.36
small intestine, neonate N16.CNhs11114.790-21I136.73
spinal cord, adult.CNhs10505.24-13C912.98
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F212.04
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G89.56
stomach, embryo E16.CNhs11022.459-17D46.91
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C69.61
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A915.21
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I114.52
submandibular gland, adult.CNhs10469.59-29C133.55
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F511.96
testis, embryo E15.CNhs11034.443-27C511.58
testis, embryo E16.CNhs11033.470-26G514.78
testis, embryo E17.CNhs11029.486-18I513.05
testis, embryo E18.CNhs11027.503-18G59.80
testis, neonate N00.CNhs11189.1300-22B710.91
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I47.91
thymus, embryo E15.CNhs11005.430-45I28.11
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B413.83
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.87
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F513.14
uterus, adult.CNhs10509.92-27E513.92
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I85.50
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.95
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.09
whole body, embryo E17.5.CNhs10513.490-9F913.12
whole body, embryo E17.CNhs10517.475-3I515.74
whole body, embryo E18.CNhs10516.493-3B312.63
whole body, neonate N00.CNhs10525.657-19C215.04
whole body, neonate N01.CNhs10576.659-23C616.45
whole body, neonate N06.CNhs10515.692-21D115.66
whole body, neonate N10.CNhs10518.761-6B418.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element8.62e-0879
lung4.36e-0714
respiratory tube4.36e-0714
respiration organ4.36e-0714
pair of lungs4.36e-0714
lung primordium4.36e-0714
lung bud4.36e-0714







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:115674877..115674907,-&oldid=2885968"