FFCP PHASE1:Mm9::chr11:108543928..108543953,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=76380|HGNC=|MCL_coexpression_id=0|UniProt=A2ABQ4,Q9DAQ8,Q5PR68|association_with_transcript=0bp_to_ENSMUST00000106714,ENSMUST00000106724,NM_029586_5end|description=CAGE_peak_2_at_Ccdc46_5end|id=chr11:108543928..108543953,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!1.58e-13!15;UBERON:0003101!1.10e-12!16;UBERON:0000079!1.10e-12!16;UBERON:0003133!6.98e-12!24;UBERON:0005156!5.90e-11!26;UBERON:0000990!5.90e-11!26;UBERON:0000473!1.36e-09!14;UBERON:0000305!3.65e-09!1;UBERON:0004176!6.03e-08!17;UBERON:0009196!6.03e-08!17;UBERON:0009117!6.03e-08!17;UBERON:0000991!1.62e-07!18;UBERON:0005564!1.62e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.81e-10,14;UBERON:0003135,1.62e-09,15;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16;UBERON:0004176,1.76e-08,17;UBERON:0009196,1.76e-08,17;UBERON:0009117,1.76e-08,17;UBERON:0000991,4.78e-08,18;UBERON:0005564,4.78e-08,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.890995748166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,5.61777680527007,0,0,0,0,0,0,0,0,0,0,5.25245846707676,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,476.884226126825,0,0,0,0,0,0.117357238645754,0,0,2.89900944991207,226.103554912424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Ccdc46}} | ||
|EntrezGene=76380 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=A2ABQ4,Q9DAQ8,Q5PR68 | |||
|association_with_transcript=0bp_to_ENSMUST00000106714,ENSMUST00000106724,NM_029586_5end | |||
|description=CAGE_peak_2_at_Ccdc46_5end | |||
|id=chr11:108543928..108543953,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.58e-13!15;UBERON:0003101!1.10e-12!16;UBERON:0000079!1.10e-12!16;UBERON:0003133!6.98e-12!24;UBERON:0005156!5.90e-11!26;UBERON:0000990!5.90e-11!26;UBERON:0000473!1.36e-09!14;UBERON:0000305!3.65e-09!1;UBERON:0004176!6.03e-08!17;UBERON:0009196!6.03e-08!17;UBERON:0009117!6.03e-08!17;UBERON:0000991!1.62e-07!18;UBERON:0005564!1.62e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.81e-10,14;UBERON:0003135,1.62e-09,15;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16;UBERON:0004176,1.76e-08,17;UBERON:0009196,1.76e-08,17;UBERON:0009117,1.76e-08,17;UBERON:0000991,4.78e-08,18;UBERON:0005564,4.78e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.890995748166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,5.61777680527007,0,0,0,0,0,0,0,0,0,0,5.25245846707676,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,476.884226126825,0,0,0,0,0,0.117357238645754,0,0,2.89900944991207,226.103554912424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Ccdc46 | |||
}} |
Revision as of 18:37, 12 September 2013
Short description: | p2@Ccdc46 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccdc46_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000106714, ENSMUST00000106724, NM_029586_5end |
EntrezGene: | Ccdc46 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.81e-10 | 14 |
male reproductive organ | 1.62e-09 | 15 |
male organism | 5.75e-09 | 16 |
male reproductive system | 5.75e-09 | 16 |
external genitalia | 1.76e-08 | 17 |
indifferent external genitalia | 1.76e-08 | 17 |
indifferent gonad | 1.76e-08 | 17 |
gonad | 4.78e-08 | 18 |
gonad primordium | 4.78e-08 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.