FFCP PHASE1:Hg19::chr2:38302488..38302516,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1545|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=2597|TSSclassifier=S|UniProt=Q16678,Q5TZV6|association_with_transcript=14bp_to_BT019979,BT020001_5end|coexpression_cluster_id=C667|description=CAGE_peak_5_at_CYP1B1_5end|id=chr2:38302488..38302516,-|ontology_enrichment_celltype=CL:0002194!1.63e-20!63;CL:0000576!1.63e-20!63;CL:0000040!1.63e-20!63;CL:0000559!1.63e-20!63;CL:0002057!2.74e-20!42;CL:0002009!2.25e-19!65;CL:0000839!5.80e-19!70;CL:0000557!1.86e-18!71;CL:0000860!4.81e-18!45;CL:0000766!3.78e-16!76;CL:0000763!5.01e-10!112;CL:0000049!5.01e-10!112;CL:0002320!7.44e-10!365;CL:0000134!4.11e-09!358;CL:0000048!4.65e-09!430;CL:0000723!1.96e-08!436;CL:0000034!1.20e-07!444;CL:0000219!8.99e-07!390|ontology_enrichment_celltype_v019=CL:0000860;2.55e-45;33!CL:0002057;2.55e-45;33!CL:0000473;4.37e-40;39!CL:0000234;4.37e-40;39!CL:0000576;5.87e-21;48!CL:0000766;7.62e-15;69!CL:0002334;6.09e-12;12!CL:0002579;4.07e-10;3!CL:0002580;4.76e-10;3!CL:0002615;3.17e-09;3!CL:0000235;4.86e-08;6!CL:0000763;7.88e-07;100|ontology_enrichment_celltype_v019_2=CL:0000473,4.03e-44,48;CL:0000234,4.03e-44,48;CL:0000860,1.11e-37,42;CL:0002057,1.11e-37,42;CL:0002194,2.25e-36,59;CL:0000576,2.25e-36,59;CL:0000040,2.25e-36,59;CL:0000559,2.25e-36,59;CL:0002009,6.08e-35,61;CL:0000839,9.74e-32,66;CL:0000557,3.73e-31,67;CL:0000766,1.78e-28,72;CL:0000763,2.51e-19,108;CL:0000049,2.51e-19,108;CL:0000134,1.96e-16,354;CL:0002320,7.36e-16,361;CL:0002087,4.58e-15,115;CL:0000048,1.50e-14,427;CL:0000723,3.71e-14,433;CL:0002031,3.89e-14,120;CL:0000219,7.78e-14,386;CL:0000034,1.19e-13,441;CL:0002334,5.76e-12,12;CL:0000738,1.24e-11,136;CL:0000988,1.73e-10,177;CL:0002032,1.93e-10,161;CL:0000837,1.93e-10,161;CL:0002580,3.45e-10,3;CL:0002579,6.21e-10,3;CL:0000037,1.07e-09,168;CL:0002615,2.79e-09,3;CL:0000235,9.31e-08,6|ontology_enrichment_development_v019=CL:0002057;6.07e-28;42!CL:0000049;4.33e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.30e-18!80;UBERON:0001474!1.48e-18!86;UBERON:0004765!2.59e-17!101;UBERON:0001434!2.59e-17!101;UBERON:0002204!1.13e-16!167;UBERON:0002390!1.12e-13!102;UBERON:0003061!1.12e-13!102;UBERON:0002193!1.41e-11!112;UBERON:0002384!1.85e-10!375;UBERON:0002405!2.31e-10!115;UBERON:0003688!5.44e-07!6;UBERON:0002358!5.44e-07!6;UBERON:0003684!5.44e-07!6;UBERON:0001178!5.44e-07!6|ontology_enrichment_uberon_v019=UBERON:0003688;1.27e-17;6!UBERON:0002358;1.27e-17;6!UBERON:0003684;1.27e-17;6!UBERON:0001178;1.27e-17;6!UBERON:0004457;8.01e-16;9!UBERON:0000042;8.01e-16;9|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-33,76;UBERON:0001474,3.64e-30,82;UBERON:0004765,9.39e-27,90;UBERON:0002405,1.26e-25,93;UBERON:0001434,4.17e-25,100;UBERON:0002390,6.72e-24,98;UBERON:0003061,6.72e-24,98;UBERON:0002193,6.30e-21,108;UBERON:0002204,2.33e-18,167;UBERON:0003688,1.68e-17,6;UBERON:0002358,1.68e-17,6;UBERON:0003684,1.68e-17,6;UBERON:0001178,1.68e-17,6;UBERON:0002384,8.38e-17,371;UBERON:0004457,1.59e-11,12;UBERON:0000042,1.59e-11,12;UBERON:0000926,2.92e-10,315;UBERON:0004120,2.92e-10,315;UBERON:0006603,2.92e-10,315;UBERON:0003081,1.05e-09,203|phase1_expression=2.36181893051724,0.856402095563933,1.69145284915165,1.0007329835313,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.895661896959697,0.971680998056939,0,3.63495596948912,3.02300754951048,0.970336244751265,3.48643555358527,2.87817521615278,1.23882548358041,8.34307937734236,6.91633907628572,5.67557351732605,1.37898272294647,0,0,4.32957380947991,3.82068610080984,1.57306439111559,1.83650335422542,2.24650318953266,0.639337125799041,7.25672860410775,11.1699648268114,10.2293940127847,0.870627715885752,2.26954089876456,1.24564449799115,7.28621129244555,3.65038042894141,5.64690996233303,0.605399502633369,1.10483290796269,1.26584954976354,0,0,0.209658645508376,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,1.00267582127178,1.88300474649071,0.795285947051099,0.486634870302636,1.03988298880475,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0.97364218096405,1.39303789839414,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0.709336764396714,1.68203280042692,0,0.24666754841716,0,0.134710672069688,0,1.96764655938411,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,2.37600571456411,0.741800787835671,0,0,0,0,0,0.438977620880838,0.612975591598039,0.600952235626387,0,0,0,0,0,0.103052529238439,0.772921620136887,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.80823028409406,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2597 | |||
|TSSclassifier=S | |||
|UniProt=Q16678,Q5TZV6 | |||
|association_with_transcript=14bp_to_BT019979,BT020001_5end | |||
|coexpression_cluster_id=C667 | |||
|description=CAGE_peak_5_at_CYP1B1_5end | |||
|id=chr2:38302488..38302516,- | |||
|ontology_enrichment_celltype=CL:0002194!1.63e-20!63;CL:0000576!1.63e-20!63;CL:0000040!1.63e-20!63;CL:0000559!1.63e-20!63;CL:0002057!2.74e-20!42;CL:0002009!2.25e-19!65;CL:0000839!5.80e-19!70;CL:0000557!1.86e-18!71;CL:0000860!4.81e-18!45;CL:0000766!3.78e-16!76;CL:0000763!5.01e-10!112;CL:0000049!5.01e-10!112;CL:0002320!7.44e-10!365;CL:0000134!4.11e-09!358;CL:0000048!4.65e-09!430;CL:0000723!1.96e-08!436;CL:0000034!1.20e-07!444;CL:0000219!8.99e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-45;33!CL:0002057;2.55e-45;33!CL:0000473;4.37e-40;39!CL:0000234;4.37e-40;39!CL:0000576;5.87e-21;48!CL:0000766;7.62e-15;69!CL:0002334;6.09e-12;12!CL:0002579;4.07e-10;3!CL:0002580;4.76e-10;3!CL:0002615;3.17e-09;3!CL:0000235;4.86e-08;6!CL:0000763;7.88e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.03e-44,48;CL:0000234,4.03e-44,48;CL:0000860,1.11e-37,42;CL:0002057,1.11e-37,42;CL:0002194,2.25e-36,59;CL:0000576,2.25e-36,59;CL:0000040,2.25e-36,59;CL:0000559,2.25e-36,59;CL:0002009,6.08e-35,61;CL:0000839,9.74e-32,66;CL:0000557,3.73e-31,67;CL:0000766,1.78e-28,72;CL:0000763,2.51e-19,108;CL:0000049,2.51e-19,108;CL:0000134,1.96e-16,354;CL:0002320,7.36e-16,361;CL:0002087,4.58e-15,115;CL:0000048,1.50e-14,427;CL:0000723,3.71e-14,433;CL:0002031,3.89e-14,120;CL:0000219,7.78e-14,386;CL:0000034,1.19e-13,441;CL:0002334,5.76e-12,12;CL:0000738,1.24e-11,136;CL:0000988,1.73e-10,177;CL:0002032,1.93e-10,161;CL:0000837,1.93e-10,161;CL:0002580,3.45e-10,3;CL:0002579,6.21e-10,3;CL:0000037,1.07e-09,168;CL:0002615,2.79e-09,3;CL:0000235,9.31e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.07e-28;42!CL:0000049;4.33e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.30e-18!80;UBERON:0001474!1.48e-18!86;UBERON:0004765!2.59e-17!101;UBERON:0001434!2.59e-17!101;UBERON:0002204!1.13e-16!167;UBERON:0002390!1.12e-13!102;UBERON:0003061!1.12e-13!102;UBERON:0002193!1.41e-11!112;UBERON:0002384!1.85e-10!375;UBERON:0002405!2.31e-10!115;UBERON:0003688!5.44e-07!6;UBERON:0002358!5.44e-07!6;UBERON:0003684!5.44e-07!6;UBERON:0001178!5.44e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.27e-17;6!UBERON:0002358;1.27e-17;6!UBERON:0003684;1.27e-17;6!UBERON:0001178;1.27e-17;6!UBERON:0004457;8.01e-16;9!UBERON:0000042;8.01e-16;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-33,76;UBERON:0001474,3.64e-30,82;UBERON:0004765,9.39e-27,90;UBERON:0002405,1.26e-25,93;UBERON:0001434,4.17e-25,100;UBERON:0002390,6.72e-24,98;UBERON:0003061,6.72e-24,98;UBERON:0002193,6.30e-21,108;UBERON:0002204,2.33e-18,167;UBERON:0003688,1.68e-17,6;UBERON:0002358,1.68e-17,6;UBERON:0003684,1.68e-17,6;UBERON:0001178,1.68e-17,6;UBERON:0002384,8.38e-17,371;UBERON:0004457,1.59e-11,12;UBERON:0000042,1.59e-11,12;UBERON:0000926,2.92e-10,315;UBERON:0004120,2.92e-10,315;UBERON:0006603,2.92e-10,315;UBERON:0003081,1.05e-09,203 | |||
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| |||
|short_description=p5@CYP1B1 | |||
}} |
Revision as of 18:30, 12 September 2013
Short description: | p5@CYP1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CYP1B1_5end |
Coexpression cluster: | C667_CD14_tenocyte_Synoviocyte_Smooth_dura_Preadipocyte_Macrophage |
Association with transcript: | 14bp_to_BT019979, BT020001_5end |
EntrezGene: | CYP1B1 |
HGNC: | 2597 |
UniProt: | Q16678Q5TZV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-33 | 76 |
bone element | 3.64e-30 | 82 |
skeletal element | 9.39e-27 | 90 |
immune system | 1.26e-25 | 93 |
skeletal system | 4.17e-25 | 100 |
hematopoietic system | 6.72e-24 | 98 |
blood island | 6.72e-24 | 98 |
hemolymphoid system | 6.30e-21 | 108 |
musculoskeletal system | 2.33e-18 | 167 |
omentum | 1.68e-17 | 6 |
peritoneum | 1.68e-17 | 6 |
abdominal cavity | 1.68e-17 | 6 |
visceral peritoneum | 1.68e-17 | 6 |
connective tissue | 8.38e-17 | 371 |
cavity lining | 1.59e-11 | 12 |
serous membrane | 1.59e-11 | 12 |
mesoderm | 2.92e-10 | 315 |
mesoderm-derived structure | 2.92e-10 | 315 |
presumptive mesoderm | 2.92e-10 | 315 |
lateral plate mesoderm | 1.05e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.