FFCP PHASE1:Hg19::chr2:29337914..29337987,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26108|TSSclassifier=S|UniProt=E9PBB1|association_with_transcript=170bp_to_ENST00000456385_5end|description=CAGE_peak_4_at_CLIP4_5end|id=chr2:29337914..29337987,+|ontology_enrichment_celltype=CL:0002057!1.49e-18!42;CL:0002194!9.67e-18!63;CL:0000576!9.67e-18!63;CL:0000040!9.67e-18!63;CL:0000559!9.67e-18!63;CL:0002009!4.30e-17!65;CL:0000860!1.10e-16!45;CL:0000839!3.16e-15!70;CL:0000557!5.09e-15!71;CL:0000766!1.08e-13!76|ontology_enrichment_celltype_v019=CL:0000860;1.38e-14;33!CL:0002057;1.38e-14;33!CL:0000473;7.43e-14;39!CL:0000234;7.43e-14;39!CL:0000576;6.05e-13;48!CL:0000766;6.12e-08;69!CL:0000136;6.29e-07;13|ontology_enrichment_celltype_v019_2=CL:0000473,6.23e-24,48;CL:0000234,6.23e-24,48;CL:0000860,1.33e-22,42;CL:0002057,1.33e-22,42;CL:0002194,2.85e-21,59;CL:0000576,2.85e-21,59;CL:0000040,2.85e-21,59;CL:0000559,2.85e-21,59;CL:0002009,1.02e-20,61;CL:0000557,5.51e-17,67;CL:0000839,8.21e-17,66;CL:0000766,4.69e-16,72;CL:0002393,1.52e-07,9;CL:0002397,1.52e-07,9;CL:0000136,1.81e-07,15|ontology_enrichment_development_v019=CL:0002057;8.32e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;5.40e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,7.24e-07,14|ontology_enrichment_uberon=UBERON:0002371!6.32e-14!80;UBERON:0000062!2.70e-13!511;UBERON:0001474!8.75e-12!86;UBERON:0004765!2.58e-11!101;UBERON:0001434!2.58e-11!101;UBERON:0000468!9.14e-11!659;UBERON:0000467!1.10e-10!625;UBERON:0000480!1.84e-10!626;UBERON:0002390!4.35e-10!102;UBERON:0003061!4.35e-10!102;UBERON:0002204!1.35e-09!167;UBERON:0003102!3.48e-08!95;UBERON:0002193!9.02e-08!112;UBERON:0000923!1.07e-07!604;UBERON:0005291!1.07e-07!604;UBERON:0006598!1.07e-07!604;UBERON:0002532!1.07e-07!604;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0002405!5.98e-07!115;UBERON:0000922!6.32e-07!612;UBERON:0000926!8.28e-07!448;UBERON:0004120!8.28e-07!448;UBERON:0006603!8.28e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-15,76;UBERON:0001474,1.78e-12,82;UBERON:0004765,5.27e-11,90;UBERON:0002390,1.21e-10,98;UBERON:0003061,1.21e-10,98;UBERON:0001434,1.83e-09,100;UBERON:0002405,7.68e-09,93;UBERON:0000926,4.57e-08,315;UBERON:0004120,4.57e-08,315;UBERON:0006603,4.57e-08,315;UBERON:0002193,6.19e-08,108;UBERON:0003102,8.24e-08,99;UBERON:0002204,3.28e-07,167|phase1_expression=1.99846217197612,6.42301571672949,13.8135316014052,11.0080628188443,6.70441641640932,3.48935409640147,0,1.26343974685366,2.35067065379855,0,0,0,0,0.37129905888014,0.331397375727916,2.6893005858071,0,0,0.975865597581014,0.246242116153576,0.408001382488506,0,0.286235987131057,1.09499540058307,0,0,0.246301768349837,0.157421562627358,3.14691421479123,1.91914699048606,1.54816123316076,1.83884244895785,1.50602959389125,2.9580320813343,0,0,0,3.87796785972314,2.4065333696417,1.73608696572681,2.68698569087909,1.94336199611388,1.54545340580512,5.81592955118259,6.80176698639857,4.85168122375632,4.64858073811369,1.23350366406548,4.64559556342655,4.89077066947656,1.5369642391746,3.78371567821736,4.82643953031266,1.93645405075148,4.06279459783025,9.03563229804502,2.72906150057846,3.59557575112135,3.67300670845083,2.56743221660875,3.19668562899521,4.61791820261403,2.59302754908121,4.26224750532694,3.48251086354301,1.70215567407342,1.24564449799115,2.76373531782418,2.08593167368081,5.86409880703815,1.81619850790011,1.47311054395026,2.84816148696796,13.3090830376523,14.0318837976929,11.740884148469,4.94245977044578,5.25619124945272,9.16135844173357,11.1154970059087,19.891667719909,21.3717059904622,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.637130828648193,0,0,0,0.255973222308837,0,0.710331756132051,0.821127996921047,0,0.267440195783507,0,2.43806866313962,1.34140171940727,2.68511379871414,0.722878304769133,2.50668955317945,1.01392563272577,1.5905718941022,0.486634870302636,2.6469748805939,1.33037638477538,1.05401742831751,0.523916301990851,1.09288586487763,2.22470665670658,3.24547393654683,4.17911369518241,2.79211717089617,0.238490624305342,0,0,0.198762407366705,1.72046919021225,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0.872188104285069,6.46063537203914,0.379891534993739,9.93068856099141,6.3104056564739,3.19201543978521,2.24271040056923,0,1.2333377420858,1.8672662123986,0.942974704487816,1.14423332179421,0.454072282934794,0,0,2.18512053781224,1.71141546463335,0.448346041655403,0.352303495931295,1.29498355494505,0.842704840213491,1.22492502752936,0.122834317311768,1.54988671763648,0,0.741800787835671,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,1.22595118319608,0.751190294532984,0.907457465280168,3.22901344239952,3.63047560991565,1.2715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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26108 | |||
|TSSclassifier=S | |||
|UniProt=E9PBB1 | |||
|association_with_transcript=170bp_to_ENST00000456385_5end | |||
|description=CAGE_peak_4_at_CLIP4_5end | |||
|id=chr2:29337914..29337987,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.49e-18!42;CL:0002194!9.67e-18!63;CL:0000576!9.67e-18!63;CL:0000040!9.67e-18!63;CL:0000559!9.67e-18!63;CL:0002009!4.30e-17!65;CL:0000860!1.10e-16!45;CL:0000839!3.16e-15!70;CL:0000557!5.09e-15!71;CL:0000766!1.08e-13!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-14;33!CL:0002057;1.38e-14;33!CL:0000473;7.43e-14;39!CL:0000234;7.43e-14;39!CL:0000576;6.05e-13;48!CL:0000766;6.12e-08;69!CL:0000136;6.29e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.23e-24,48;CL:0000234,6.23e-24,48;CL:0000860,1.33e-22,42;CL:0002057,1.33e-22,42;CL:0002194,2.85e-21,59;CL:0000576,2.85e-21,59;CL:0000040,2.85e-21,59;CL:0000559,2.85e-21,59;CL:0002009,1.02e-20,61;CL:0000557,5.51e-17,67;CL:0000839,8.21e-17,66;CL:0000766,4.69e-16,72;CL:0002393,1.52e-07,9;CL:0002397,1.52e-07,9;CL:0000136,1.81e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;8.32e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.40e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.24e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.32e-14!80;UBERON:0000062!2.70e-13!511;UBERON:0001474!8.75e-12!86;UBERON:0004765!2.58e-11!101;UBERON:0001434!2.58e-11!101;UBERON:0000468!9.14e-11!659;UBERON:0000467!1.10e-10!625;UBERON:0000480!1.84e-10!626;UBERON:0002390!4.35e-10!102;UBERON:0003061!4.35e-10!102;UBERON:0002204!1.35e-09!167;UBERON:0003102!3.48e-08!95;UBERON:0002193!9.02e-08!112;UBERON:0000923!1.07e-07!604;UBERON:0005291!1.07e-07!604;UBERON:0006598!1.07e-07!604;UBERON:0002532!1.07e-07!604;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0002405!5.98e-07!115;UBERON:0000922!6.32e-07!612;UBERON:0000926!8.28e-07!448;UBERON:0004120!8.28e-07!448;UBERON:0006603!8.28e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-15,76;UBERON:0001474,1.78e-12,82;UBERON:0004765,5.27e-11,90;UBERON:0002390,1.21e-10,98;UBERON:0003061,1.21e-10,98;UBERON:0001434,1.83e-09,100;UBERON:0002405,7.68e-09,93;UBERON:0000926,4.57e-08,315;UBERON:0004120,4.57e-08,315;UBERON:0006603,4.57e-08,315;UBERON:0002193,6.19e-08,108;UBERON:0003102,8.24e-08,99;UBERON:0002204,3.28e-07,167 | |||
|phase1_expression=1.99846217197612,6.42301571672949,13.8135316014052,11.0080628188443,6.70441641640932,3.48935409640147,0,1.26343974685366,2.35067065379855,0,0,0,0,0.37129905888014,0.331397375727916,2.6893005858071,0,0,0.975865597581014,0.246242116153576,0.408001382488506,0,0.286235987131057,1.09499540058307,0,0,0.246301768349837,0.157421562627358,3.14691421479123,1.91914699048606,1.54816123316076,1.83884244895785,1.50602959389125,2.9580320813343,0,0,0,3.87796785972314,2.4065333696417,1.73608696572681,2.68698569087909,1.94336199611388,1.54545340580512,5.81592955118259,6.80176698639857,4.85168122375632,4.64858073811369,1.23350366406548,4.64559556342655,4.89077066947656,1.5369642391746,3.78371567821736,4.82643953031266,1.93645405075148,4.06279459783025,9.03563229804502,2.72906150057846,3.59557575112135,3.67300670845083,2.56743221660875,3.19668562899521,4.61791820261403,2.59302754908121,4.26224750532694,3.48251086354301,1.70215567407342,1.24564449799115,2.76373531782418,2.08593167368081,5.86409880703815,1.81619850790011,1.47311054395026,2.84816148696796,13.3090830376523,14.0318837976929,11.740884148469,4.94245977044578,5.25619124945272,9.16135844173357,11.1154970059087,19.891667719909,21.3717059904622,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.637130828648193,0,0,0,0.255973222308837,0,0.710331756132051,0.821127996921047,0,0.267440195783507,0,2.43806866313962,1.34140171940727,2.68511379871414,0.722878304769133,2.50668955317945,1.01392563272577,1.5905718941022,0.486634870302636,2.6469748805939,1.33037638477538,1.05401742831751,0.523916301990851,1.09288586487763,2.22470665670658,3.24547393654683,4.17911369518241,2.79211717089617,0.238490624305342,0,0,0.198762407366705,1.72046919021225,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0.872188104285069,6.46063537203914,0.379891534993739,9.93068856099141,6.3104056564739,3.19201543978521,2.24271040056923,0,1.2333377420858,1.8672662123986,0.942974704487816,1.14423332179421,0.454072282934794,0,0,2.18512053781224,1.71141546463335,0.448346041655403,0.352303495931295,1.29498355494505,0.842704840213491,1.22492502752936,0.122834317311768,1.54988671763648,0,0.741800787835671,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,1.22595118319608,0.751190294532984,0.907457465280168,3.22901344239952,3.63047560991565,1.27159140695737,3.60109315301283,1.8549455262919,7.9868567414145,4.46680455195816,2.02531598689519,1.46155507741798,3.28163906517349,2.76149695926898,3.71785930683267,3.90510551768276,1.71278566986988,0.169560592310488,3.86521706326594,2.72746120590835,1.72082757233402,0,0,0,0,0,0,1.56449532329816,0,0,4.17931135228781,5.77503585335668,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,1.2347220339942,0,1.26755034821831,0,1.77236972004421,0,0,3.08822058537346,3.51200913307602,1.1240175325762,1.00528972411631,2.03694579348765,0.325808305310325,0,0,0.695582429850461,1.40890433082986,0.288732895522148,0,0,0,0,1.23108503043699,5.6161023633417,3.56714789492948,0,2.51973192298289,3.40260233381728,3.22410681730254,5.52204483176528,0.766765358330422,0.985326475791887,0.616339038092582,0.207328115540772,0,0.6312121671319,0,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.224262168690721,0,0.1466765716419,5.42941206182667,0,0,3.72313363218819,0,0.514414748524284,1.41849132023278,0.266422179016099,5.7191197463259,3.25572963234866,0.823240336780769,0.977208552881205,2.13235169245527,0,5.72734816413214,6.10073421020206,10.0972721093878,2.43247561282381,0.502257091432126,6.32501818449095,0.239624855491583,0,0,0.868687840005475,2.05476322550383,1.07436577943937,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,2.07970861530807,2.67643483195743,3.6271555457805,3.5142424497814,0.902838299183157,2.27407504055985,1.03473071292505,2.65690239414175,0.184369168541703,2.43274120510632,0,0,2.68798433959754,1.72571360654893,1.17400313583789,0,0,0,8.93188108147597,10.4354141835882,5.61320188866147,21.3992379257021,13.3043884757343,2.89537058058494,4.45254199334973,1.07946785661859,1.06537035187876,0.657017248110473,5.19254429183621,0.581051892299796,0.120859449591622,1.20303882181971,5.34069735828199,5.1666501674073,2.1850940160806,1.70461739447251,0,0.308061348417659,0,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.895499018888713,0.219259876645935,0,7.69350375349168,6.88830755969382,12.3643789972435,1.854738209659,0,0,2.29706215198469,1.95018073810956,11.2478750890912,0.676695028044854,1.07834031980251,1.38153307253517,0.827019434907183,1.07420244868274,1.45016693914229,1.36362603865761,0.801288320820636,4.13212288402445,1.34533047155574,4.3388322248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| |||
|short_description=p4@CLIP4 | |||
}} |
Revision as of 18:14, 12 September 2013
Short description: | p4@CLIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CLIP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 170bp_to_ENST00000456385_5end |
EntrezGene: | CLIP4 |
HGNC: | 26108 |
UniProt: | E9PBB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.23e-24 | 48 |
phagocyte | 6.23e-24 | 48 |
classical monocyte | 1.33e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.33e-22 | 42 |
monopoietic cell | 2.85e-21 | 59 |
monocyte | 2.85e-21 | 59 |
monoblast | 2.85e-21 | 59 |
promonocyte | 2.85e-21 | 59 |
macrophage dendritic cell progenitor | 1.02e-20 | 61 |
granulocyte monocyte progenitor cell | 5.51e-17 | 67 |
myeloid lineage restricted progenitor cell | 8.21e-17 | 66 |
myeloid leukocyte | 4.69e-16 | 72 |
intermediate monocyte | 1.52e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.52e-07 | 9 |
fat cell | 1.81e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.87e-15 | 76 |
bone element | 1.78e-12 | 82 |
skeletal element | 5.27e-11 | 90 |
hematopoietic system | 1.21e-10 | 98 |
blood island | 1.21e-10 | 98 |
skeletal system | 1.83e-09 | 100 |
immune system | 7.68e-09 | 93 |
mesoderm | 4.57e-08 | 315 |
mesoderm-derived structure | 4.57e-08 | 315 |
presumptive mesoderm | 4.57e-08 | 315 |
hemolymphoid system | 6.19e-08 | 108 |
surface structure | 8.24e-08 | 99 |
musculoskeletal system | 3.28e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.24e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.