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FFCP PHASE1:Mm9::chr10:94407499..94407525,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=54712|HGNC=|MCL_coexpression_id=137|UniProt=Q9QZC2,Q9CRY9|association_with_transcript=-287bp_to_ENSMUST00000099337,NM_018797,uc007gvz.2_5end|description=CAGE_peak_3_at_Plxnc1_5end|id=chr10:94407499..94407525,-|ontology_enrichment_celltype=CL:0000117!1.11e-09!23;CL:0000337!1.11e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-10,23;CL:0000337,1.68e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!2.28e-09!114;UBERON:0003056!1.09e-08!49;UBERON:0002020!9.50e-08!34;UBERON:0003080!2.13e-07!40;UBERON:0001017!2.31e-07!73;UBERON:0005743!2.31e-07!73;UBERON:0002346!2.70e-07!71;UBERON:0003075!2.70e-07!71;UBERON:0007284!2.70e-07!71;UBERON:0001049!2.88e-07!52;UBERON:0005068!2.88e-07!52;UBERON:0006241!2.88e-07!52;UBERON:0007135!2.88e-07!52;UBERON:0004111!3.29e-07!122;UBERON:0000955!4.50e-07!50;UBERON:0006238!4.50e-07!50;UBERON:0002780!5.81e-07!39;UBERON:0001890!5.81e-07!39;UBERON:0006240!5.81e-07!39;UBERON:0000033!7.41e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.57e-09,49;UBERON:0000025,1.38e-08,114;UBERON:0003080,2.69e-08,40;UBERON:0000073,3.24e-08,54;UBERON:0002020,3.43e-08,34;UBERON:0002780,9.59e-08,39;UBERON:0001890,9.59e-08,39;UBERON:0006240,9.59e-08,39;UBERON:0002346,1.79e-07,64;UBERON:0003075,1.79e-07,64;UBERON:0007284,1.79e-07,64;UBERON:0001049,1.90e-07,52;UBERON:0005068,1.90e-07,52;UBERON:0006241,1.90e-07,52;UBERON:0007135,1.90e-07,52;UBERON:0000955,5.35e-07,47;UBERON:0006238,5.35e-07,47;UBERON:0004111,7.18e-07,122;UBERON:0003528,8.00e-07,29;UBERON:0002791,8.00e-07,29;UBERON:0001893,8.00e-07,29;UBERON:0001017,9.42e-07,73|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.67860320474049,0,0.468129052643987,0,0,0,0.262261207256992,1.99865857089398,1.82227740650843,2.09868563438444,2.83915948822414,0.685572168028694,1.27316895539409,1.10556277196391,1.09220046320974,1.04479915655574,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,7.0320181007142,8.37637990358077,5.88231488031014,10.9287277593351,8.73918635456076,0,0,0,0,0.218025156380447,0,0,0.699932108126813,0,0.503347818173209,0,0.336093799142464,0.257259436035947,1.43266719969378,0,6.27181028664753,5.81890077199236,3.80298842103708,0,0,1.7997994345628,2.96659908770092,2.8419204597844,0.898800331555214,1.53687322128622,1.76272340924412,1.62007125998029,2.3135745748652,1.14260393761521,0.883474163806454,2.9397791811589,2.20444583341944,2.75765635983006,3.30347642998166,0.893811366596314,1.38245879930619,4.08847491963601,4.57438218012048,4.16730696445408,0.558365998002762,2.25105044012672,1.83357897332172,2.35702868378934,3.27454865837937,3.91438836233131,0,0,7.53647670624362,2.58127163094416,0,1.61910957491345,0,1.79210754838934,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.68510327831436,0.258937883647172,0.742210695324124,0.693941307064543,0.304465478312141,0.461230994512117,0.60289056221049,0.705532242814229,0.376999773989026,0,0,1.76922110389975,0.323533699894818,1.32504911076236,0.969750506270444,0,0.292780797011547,1.04723353406728,0.510914110417183,0.718890747035522,0.599902730993408,0.508280908292259,3.14560342750128,2.28750301409313,4.52355667606312,1.56441888173049,1.02286182932132,1.45451631191692,1.94689515681309,0.305518091550949,0.622034853050465,0,0.210441855886474,0.780722657776222,1.60931473103431,1.98068342785884,2.10986744970001,2.24520447199382,1.7935920839879,1.21812241927647,0.776110112217047,0,0.567318240503458,0.879755620819744,0.43839146485515,0,0.348252166522167,0.205782136407943,1.99034266818493,0.702213187313235,0.51469581422943,0,1.24275463521301,2.34526059981096,1.08037236876609,1.42046841351126,0.393528463494808,0.771335564436891,0.232533944750408,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.324275238183423,0.438599962275997,0.878200461164203,0.805238512562231,0.841159794256509,2.57261530948211,0.330418782983798,0,0.639864751605702,0.464473343720877,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.814605311381257,0.969762435838129,0.140271639780637,0.189709611372772,0,0.156998727841375,0,0.592905254174298,1.83529616287703,1.17935397067922,1.34917267430912,1.21716072833102,0.964708639009667,1.01850340712568,2.01387296215567,0.648540907100142,1.09824565275233,4.31304619582064,3.34926852901653,4.36852742360385,1.01031551178845,1.07638448113147,0.482443521363367,1.66277871149944,1.70542270593436,2.77040459951444,1.35796068620151,1.40814148973101,0.670025029767263,0.952174563544055,2.53673742215138,2.36452716159286,1.99318220683897,2.87018583583477,2.62181303545181,0.690739927463582,0.867894351489069,0,3.26343410291226,0,0,0.481651769963376,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.477937595905104,0,1.13230612315533,0.404810701674894,0.292255857911312,0.395287777946524,3.21321316421807,3.40656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|EntrezGene=54712
|HGNC=
|MCL_coexpression_id=137
|UniProt=Q9QZC2,Q9CRY9
|association_with_transcript=-287bp_to_ENSMUST00000099337,NM_018797,uc007gvz.2_5end
|description=CAGE_peak_3_at_Plxnc1_5end
|id=chr10:94407499..94407525,-
|ontology_enrichment_celltype=CL:0000117!1.11e-09!23;CL:0000337!1.11e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-10,23;CL:0000337,1.68e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!2.28e-09!114;UBERON:0003056!1.09e-08!49;UBERON:0002020!9.50e-08!34;UBERON:0003080!2.13e-07!40;UBERON:0001017!2.31e-07!73;UBERON:0005743!2.31e-07!73;UBERON:0002346!2.70e-07!71;UBERON:0003075!2.70e-07!71;UBERON:0007284!2.70e-07!71;UBERON:0001049!2.88e-07!52;UBERON:0005068!2.88e-07!52;UBERON:0006241!2.88e-07!52;UBERON:0007135!2.88e-07!52;UBERON:0004111!3.29e-07!122;UBERON:0000955!4.50e-07!50;UBERON:0006238!4.50e-07!50;UBERON:0002780!5.81e-07!39;UBERON:0001890!5.81e-07!39;UBERON:0006240!5.81e-07!39;UBERON:0000033!7.41e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.57e-09,49;UBERON:0000025,1.38e-08,114;UBERON:0003080,2.69e-08,40;UBERON:0000073,3.24e-08,54;UBERON:0002020,3.43e-08,34;UBERON:0002780,9.59e-08,39;UBERON:0001890,9.59e-08,39;UBERON:0006240,9.59e-08,39;UBERON:0002346,1.79e-07,64;UBERON:0003075,1.79e-07,64;UBERON:0007284,1.79e-07,64;UBERON:0001049,1.90e-07,52;UBERON:0005068,1.90e-07,52;UBERON:0006241,1.90e-07,52;UBERON:0007135,1.90e-07,52;UBERON:0000955,5.35e-07,47;UBERON:0006238,5.35e-07,47;UBERON:0004111,7.18e-07,122;UBERON:0003528,8.00e-07,29;UBERON:0002791,8.00e-07,29;UBERON:0001893,8.00e-07,29;UBERON:0001017,9.42e-07,73
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.67860320474049,0,0.468129052643987,0,0,0,0.262261207256992,1.99865857089398,1.82227740650843,2.09868563438444,2.83915948822414,0.685572168028694,1.27316895539409,1.10556277196391,1.09220046320974,1.04479915655574,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,7.0320181007142,8.37637990358077,5.88231488031014,10.9287277593351,8.73918635456076,0,0,0,0,0.218025156380447,0,0,0.699932108126813,0,0.503347818173209,0,0.336093799142464,0.257259436035947,1.43266719969378,0,6.27181028664753,5.81890077199236,3.80298842103708,0,0,1.7997994345628,2.96659908770092,2.8419204597844,0.898800331555214,1.53687322128622,1.76272340924412,1.62007125998029,2.3135745748652,1.14260393761521,0.883474163806454,2.9397791811589,2.20444583341944,2.75765635983006,3.30347642998166,0.893811366596314,1.38245879930619,4.08847491963601,4.57438218012048,4.16730696445408,0.558365998002762,2.25105044012672,1.83357897332172,2.35702868378934,3.27454865837937,3.91438836233131,0,0,7.53647670624362,2.58127163094416,0,1.61910957491345,0,1.79210754838934,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.68510327831436,0.258937883647172,0.742210695324124,0.693941307064543,0.304465478312141,0.461230994512117,0.60289056221049,0.705532242814229,0.376999773989026,0,0,1.76922110389975,0.323533699894818,1.32504911076236,0.969750506270444,0,0.292780797011547,1.04723353406728,0.510914110417183,0.718890747035522,0.599902730993408,0.508280908292259,3.14560342750128,2.28750301409313,4.52355667606312,1.56441888173049,1.02286182932132,1.45451631191692,1.94689515681309,0.305518091550949,0.622034853050465,0,0.210441855886474,0.780722657776222,1.60931473103431,1.98068342785884,2.10986744970001,2.24520447199382,1.7935920839879,1.21812241927647,0.776110112217047,0,0.567318240503458,0.879755620819744,0.43839146485515,0,0.348252166522167,0.205782136407943,1.99034266818493,0.702213187313235,0.51469581422943,0,1.24275463521301,2.34526059981096,1.08037236876609,1.42046841351126,0.393528463494808,0.771335564436891,0.232533944750408,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.324275238183423,0.438599962275997,0.878200461164203,0.805238512562231,0.841159794256509,2.57261530948211,0.330418782983798,0,0.639864751605702,0.464473343720877,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.814605311381257,0.969762435838129,0.140271639780637,0.189709611372772,0,0.156998727841375,0,0.592905254174298,1.83529616287703,1.17935397067922,1.34917267430912,1.21716072833102,0.964708639009667,1.01850340712568,2.01387296215567,0.648540907100142,1.09824565275233,4.31304619582064,3.34926852901653,4.36852742360385,1.01031551178845,1.07638448113147,0.482443521363367,1.66277871149944,1.70542270593436,2.77040459951444,1.35796068620151,1.40814148973101,0.670025029767263,0.952174563544055,2.53673742215138,2.36452716159286,1.99318220683897,2.87018583583477,2.62181303545181,0.690739927463582,0.867894351489069,0,3.26343410291226,0,0,0.481651769963376,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.477937595905104,0,1.13230612315533,0.404810701674894,0.292255857911312,0.395287777946524,3.21321316421807,3.40656204499845,0.35613120733451,1.14020871547503,0.329940245945071,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.712994756769443,0,0,0,0,1.08036656418786,1.55230420539305,1.07168517515796,1.06404140185364,0.713475270408282,1.64549020602121,1.2178597964584,0.469343416127421,0,0,0.32977250588296,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0.556275906031529,3.2465467351592,0.412773735926445,0.925972636848558,1.31857919903284,1.50363650493128,2.28778173206523,1.18984900995699,1.81936888020755,0.690999869022119,0,0.474503990371703,0.609958401380546,0.216010681643603,0.418176592028937,0.655087691238533,0.539457385539283,0.330613822901344,0,0,0,0,2.69129782879162,2.15096037594227,2.72231663681667,3.09983576346555,3.71703476079712,2.93393096614385,7.94246747548096,7.65473214307689,2.41584120826006,0.288030006257865,0.632022241256357,0.202725215290164,0.410843828659309,0.129920822977795,0,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.487289403698762,0.0962118416403295,0.233753804363138,0,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.750729901804728,0.36630324853453,0.428736758158132,0,1.12950368523413,1.84130094602871,0,2.06223818812425,2.05524755931193,0.755393897389701,0.675022500231806,1.80128481289688,0.906284817968409,2.07104124700728,0.103787347584177,1.19707462020309,1.70733605754134,1.94485373654635,0,1.2869045591501,1.33348036680969,1.23621034343337,1.28367683836726,1.51618327058278,1.01391719956096,0.754505365544305,0.842773567228942,1.34452820050225,1.20614484806788,0,1.0429589335037,0.5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|short_description=p3@Plxnc1
}}

Revision as of 18:02, 12 September 2013

Short description:p3@Plxnc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Plxnc1_5end
Coexpression cluster:MCL_coexpression_mm9:137
Association with transcript: -287bp_to_ENSMUST00000099337, NM_018797, uc007gvz.2_5end
EntrezGene:Plxnc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Plxnc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.52
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I47.94
testis, neonate N10.CNhs11204.763-44D97.65
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.68e-1023
neuroblast (sensu Vertebrata)1.68e-1023

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate3.57e-0949
tube1.38e-08114
anterior neural tube2.69e-0840
regional part of nervous system3.24e-0854
gray matter3.43e-0834
regional part of forebrain9.59e-0839
forebrain9.59e-0839
future forebrain9.59e-0839
neurectoderm1.79e-0764
neural plate1.79e-0764
presumptive neural plate1.79e-0764
neural tube1.90e-0752
neural rod1.90e-0752
future spinal cord1.90e-0752
neural keel1.90e-0752
brain5.35e-0747
future brain5.35e-0747
anatomical conduit7.18e-07122
brain grey matter8.00e-0729
regional part of telencephalon8.00e-0729
telencephalon8.00e-0729
central nervous system9.42e-0773







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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