FFCP PHASE1:Mm9::chr10:85810283..85810294,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=323|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:85810283..85810294,+|id=chr10:85810283..85810294,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.74e-24,3;CL:0000359,1.74e-24,3;CL:0002539,1.74e-24,3;CL:0000514,1.74e-24,3;CL:0000680,8.26e-13,6;CL:0000187,8.26e-13,6;CL:0000056,8.26e-13,6;CL:0000222,3.95e-11,7;CL:0002605,5.06e-10,2;CL:0002604,5.06e-10,2;CL:0000355,7.02e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!7.61e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.74e-24,3;UBERON:0004237,1.74e-24,3;UBERON:0004695,1.74e-24,3;UBERON:0002111,1.74e-24,3;UBERON:0004178,1.74e-24,3;UBERON:0000947,1.16e-18,4;UBERON:0001637,1.16e-18,4;UBERON:0004573,1.16e-18,4;UBERON:0003509,1.16e-18,4;UBERON:0004571,1.16e-18,4;UBERON:0010191,1.16e-18,4;UBERON:0004572,1.16e-18,4;UBERON:0000055,3.73e-15,5;UBERON:0007500,3.73e-15,5;UBERON:0001981,3.73e-15,5;UBERON:0002049,3.73e-15,5;UBERON:0007798,3.73e-15,5;UBERON:0004537,3.73e-15,5;UBERON:0006965,3.73e-15,5;UBERON:0001134,7.02e-09,9;UBERON:0002036,7.02e-09,9;UBERON:0002385,7.02e-09,9;UBERON:0000486,7.02e-09,9;UBERON:0007503,7.02e-09,9;UBERON:0001015,7.02e-09,9;UBERON:0002329,7.02e-09,9;UBERON:0003082,7.02e-09,9;UBERON:0003059,7.02e-09,9;UBERON:0007282,7.02e-09,9;UBERON:0004290,7.02e-09,9;UBERON:0009618,7.02e-09,9;UBERON:0000383,4.34e-08,10;UBERON:0007524,1.94e-07,11;UBERON:0003077,1.94e-07,11;UBERON:0007285,1.94e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.33166941804883,0.917733760808408,0,0.218025156380447,0.659058548203415,1.36100929351998,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.0755715601067855,0.869593466105033,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0,0.230615497256059,0.301445281105245,0.587943535678524,0.502666365318702,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0.511430914660661,0.20778804455956,0.162241263067758,0.407357455401265,0.248813941220186,0,0.631325567659422,0,0,0,0.30140963567143,0.204109497453984,0,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0.583826711835847,0.16455984991348,0.164167464079095,0.162137619091711,0,0.439100230582101,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.280543279561274,0.0632365371242573,0.295220295959204,0.31399745568275,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.476087281772027,0.780534591431195,0.315270288212382,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,1.01254341007058,0,0,0,0,0.160550589987792,0,0.327869890753351,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0.790575555893047,0,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.241251699712623,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr10:85810283..85810294,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=323 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:85810283..85810294,+ | |||
|id=chr10:85810283..85810294,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.74e-24,3;CL:0000359,1.74e-24,3;CL:0002539,1.74e-24,3;CL:0000514,1.74e-24,3;CL:0000680,8.26e-13,6;CL:0000187,8.26e-13,6;CL:0000056,8.26e-13,6;CL:0000222,3.95e-11,7;CL:0002605,5.06e-10,2;CL:0002604,5.06e-10,2;CL:0000355,7.02e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!7.61e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.74e-24,3;UBERON:0004237,1.74e-24,3;UBERON:0004695,1.74e-24,3;UBERON:0002111,1.74e-24,3;UBERON:0004178,1.74e-24,3;UBERON:0000947,1.16e-18,4;UBERON:0001637,1.16e-18,4;UBERON:0004573,1.16e-18,4;UBERON:0003509,1.16e-18,4;UBERON:0004571,1.16e-18,4;UBERON:0010191,1.16e-18,4;UBERON:0004572,1.16e-18,4;UBERON:0000055,3.73e-15,5;UBERON:0007500,3.73e-15,5;UBERON:0001981,3.73e-15,5;UBERON:0002049,3.73e-15,5;UBERON:0007798,3.73e-15,5;UBERON:0004537,3.73e-15,5;UBERON:0006965,3.73e-15,5;UBERON:0001134,7.02e-09,9;UBERON:0002036,7.02e-09,9;UBERON:0002385,7.02e-09,9;UBERON:0000486,7.02e-09,9;UBERON:0007503,7.02e-09,9;UBERON:0001015,7.02e-09,9;UBERON:0002329,7.02e-09,9;UBERON:0003082,7.02e-09,9;UBERON:0003059,7.02e-09,9;UBERON:0007282,7.02e-09,9;UBERON:0004290,7.02e-09,9;UBERON:0009618,7.02e-09,9;UBERON:0000383,4.34e-08,10;UBERON:0007524,1.94e-07,11;UBERON:0003077,1.94e-07,11;UBERON:0007285,1.94e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.33166941804883,0.917733760808408,0,0.218025156380447,0.659058548203415,1.36100929351998,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.0755715601067855,0.869593466105033,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0,0.230615497256059,0.301445281105245,0.587943535678524,0.502666365318702,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0.511430914660661,0.20778804455956,0.162241263067758,0.407357455401265,0.248813941220186,0,0.631325567659422,0,0,0,0.30140963567143,0.204109497453984,0,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0.583826711835847,0.16455984991348,0.164167464079095,0.162137619091711,0,0.439100230582101,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.280543279561274,0.0632365371242573,0.295220295959204,0.31399745568275,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.476087281772027,0.780534591431195,0.315270288212382,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,1.01254341007058,0,0,0,0,0.160550589987792,0,0.327869890753351,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0.790575555893047,0,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.241251699712623,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr10:85810283..85810294,+ | |||
}} |
Revision as of 17:50, 12 September 2013
Short description: | p@chr10:85810283..85810294, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85810283..85810294, + |
Coexpression cluster: | MCL_coexpression_mm9:323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.74e-24 | 3 |
vascular associated smooth muscle cell | 1.74e-24 | 3 |
aortic smooth muscle cell | 1.74e-24 | 3 |
smooth muscle myoblast | 1.74e-24 | 3 |
muscle precursor cell | 8.26e-13 | 6 |
muscle cell | 8.26e-13 | 6 |
myoblast | 8.26e-13 | 6 |
mesodermal cell | 3.95e-11 | 7 |
astrocyte of the cerebral cortex | 5.06e-10 | 2 |
astrocyte of the hippocampus | 5.06e-10 | 2 |
multi-potent skeletal muscle stem cell | 7.02e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.74e-24 | 3 |
blood vessel smooth muscle | 1.74e-24 | 3 |
arterial system smooth muscle | 1.74e-24 | 3 |
artery smooth muscle tissue | 1.74e-24 | 3 |
aorta smooth muscle tissue | 1.74e-24 | 3 |
aorta | 1.16e-18 | 4 |
artery | 1.16e-18 | 4 |
systemic artery | 1.16e-18 | 4 |
arterial blood vessel | 1.16e-18 | 4 |
systemic arterial system | 1.16e-18 | 4 |
aortic system | 1.16e-18 | 4 |
arterial system | 1.16e-18 | 4 |
vessel | 3.73e-15 | 5 |
epithelial tube open at both ends | 3.73e-15 | 5 |
blood vessel | 3.73e-15 | 5 |
vasculature | 3.73e-15 | 5 |
vascular system | 3.73e-15 | 5 |
blood vasculature | 3.73e-15 | 5 |
vascular cord | 3.73e-15 | 5 |
skeletal muscle tissue | 7.02e-09 | 9 |
striated muscle tissue | 7.02e-09 | 9 |
muscle tissue | 7.02e-09 | 9 |
multilaminar epithelium | 7.02e-09 | 9 |
epithelial vesicle | 7.02e-09 | 9 |
musculature | 7.02e-09 | 9 |
somite | 7.02e-09 | 9 |
myotome | 7.02e-09 | 9 |
presomitic mesoderm | 7.02e-09 | 9 |
presumptive segmental plate | 7.02e-09 | 9 |
dermomyotome | 7.02e-09 | 9 |
trunk paraxial mesoderm | 7.02e-09 | 9 |
musculature of body | 4.34e-08 | 10 |
dense mesenchyme tissue | 1.94e-07 | 11 |
paraxial mesoderm | 1.94e-07 | 11 |
presumptive paraxial mesoderm | 1.94e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.