FFCP PHASE1:Mm9::chr10:72789735..72789744,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=1908|UniProt=|association_with_transcript=30bp_to_ENSMUST00000147653_5end|description=CAGE_peak_1_at_ENSMUST00000147653_5end|id=chr10:72789735..72789744,-|ontology_enrichment_celltype=CL:0002293!3.34e-12!3;CL:0000192!7.63e-12!3;CL:0000359!7.63e-12!3;CL:0002539!7.63e-12!3;CL:0000514!7.63e-12!3|ontology_enrichment_celltype_v019_2=CL:0002293,2.59e-19,3;CL:0000192,1.03e-18,3;CL:0000359,1.03e-18,3;CL:0002539,1.03e-18,3;CL:0000514,1.03e-18,3;CL:0000680,1.21e-09,6;CL:0000187,1.21e-09,6;CL:0000056,1.21e-09,6;CL:0000222,2.44e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!9.75e-19!14;UBERON:0003135!2.16e-17!15;UBERON:0003101!3.24e-16!16;UBERON:0000079!3.24e-16!16;UBERON:0004176!3.54e-15!17;UBERON:0009196!3.54e-15!17;UBERON:0009117!3.54e-15!17;UBERON:0000991!2.97e-14!18;UBERON:0005564!2.97e-14!18;UBERON:0001135!7.63e-12!3;UBERON:0004237!7.63e-12!3;UBERON:0004695!7.63e-12!3;UBERON:0002111!7.63e-12!3;UBERON:0004178!7.63e-12!3;UBERON:0003133!2.50e-10!24;UBERON:0005156!2.02e-09!26;UBERON:0000990!2.02e-09!26;UBERON:0000947!5.48e-09!4;UBERON:0001637!5.48e-09!4;UBERON:0003509!5.48e-09!4;UBERON:0004573!5.48e-09!4;UBERON:0004571!5.48e-09!4;UBERON:0010191!5.48e-09!4;UBERON:0004572!5.48e-09!4;UBERON:0000055!2.89e-07!5;UBERON:0001981!2.89e-07!5;UBERON:0002049!2.89e-07!5;UBERON:0007500!2.89e-07!5;UBERON:0007798!2.89e-07!5;UBERON:0004537!2.89e-07!5;UBERON:0006965!2.89e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.03e-18,3;UBERON:0004237,1.03e-18,3;UBERON:0004695,1.03e-18,3;UBERON:0002111,1.03e-18,3;UBERON:0004178,1.03e-18,3;UBERON:0000473,2.04e-14,14;UBERON:0000947,3.43e-14,4;UBERON:0001637,3.43e-14,4;UBERON:0004573,3.43e-14,4;UBERON:0003509,3.43e-14,4;UBERON:0004571,3.43e-14,4;UBERON:0010191,3.43e-14,4;UBERON:0004572,3.43e-14,4;UBERON:0003135,1.95e-13,15;UBERON:0003101,1.40e-12,16;UBERON:0000079,1.40e-12,16;UBERON:0004176,8.03e-12,17;UBERON:0009196,8.03e-12,17;UBERON:0009117,8.03e-12,17;UBERON:0000055,1.82e-11,5;UBERON:0007500,1.82e-11,5;UBERON:0001981,1.82e-11,5;UBERON:0002049,1.82e-11,5;UBERON:0007798,1.82e-11,5;UBERON:0004537,1.82e-11,5;UBERON:0006965,1.82e-11,5;UBERON:0000991,3.79e-11,18;UBERON:0005564,3.79e-11,18;UBERON:0003133,2.82e-08,24;UBERON:0005156,1.30e-07,26;UBERON:0000990,1.30e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9028013572429,2.93993100536592,2.9367480345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,1.36344258062446,0.519572009205738,1.7666978725517,0,26.9485602570067,10.1922095882658,7.11066703153331,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.4426971888646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0.777804753376191,0.516639293910924,0.675824501963113,1.05621514781179,1.8228613878153,2.30690557736564,2.17425708743405,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000147653}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=1908 | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENSMUST00000147653_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000147653_5end | |||
|id=chr10:72789735..72789744,- | |||
|ontology_enrichment_celltype=CL:0002293!3.34e-12!3;CL:0000192!7.63e-12!3;CL:0000359!7.63e-12!3;CL:0002539!7.63e-12!3;CL:0000514!7.63e-12!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,2.59e-19,3;CL:0000192,1.03e-18,3;CL:0000359,1.03e-18,3;CL:0002539,1.03e-18,3;CL:0000514,1.03e-18,3;CL:0000680,1.21e-09,6;CL:0000187,1.21e-09,6;CL:0000056,1.21e-09,6;CL:0000222,2.44e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!9.75e-19!14;UBERON:0003135!2.16e-17!15;UBERON:0003101!3.24e-16!16;UBERON:0000079!3.24e-16!16;UBERON:0004176!3.54e-15!17;UBERON:0009196!3.54e-15!17;UBERON:0009117!3.54e-15!17;UBERON:0000991!2.97e-14!18;UBERON:0005564!2.97e-14!18;UBERON:0001135!7.63e-12!3;UBERON:0004237!7.63e-12!3;UBERON:0004695!7.63e-12!3;UBERON:0002111!7.63e-12!3;UBERON:0004178!7.63e-12!3;UBERON:0003133!2.50e-10!24;UBERON:0005156!2.02e-09!26;UBERON:0000990!2.02e-09!26;UBERON:0000947!5.48e-09!4;UBERON:0001637!5.48e-09!4;UBERON:0003509!5.48e-09!4;UBERON:0004573!5.48e-09!4;UBERON:0004571!5.48e-09!4;UBERON:0010191!5.48e-09!4;UBERON:0004572!5.48e-09!4;UBERON:0000055!2.89e-07!5;UBERON:0001981!2.89e-07!5;UBERON:0002049!2.89e-07!5;UBERON:0007500!2.89e-07!5;UBERON:0007798!2.89e-07!5;UBERON:0004537!2.89e-07!5;UBERON:0006965!2.89e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.03e-18,3;UBERON:0004237,1.03e-18,3;UBERON:0004695,1.03e-18,3;UBERON:0002111,1.03e-18,3;UBERON:0004178,1.03e-18,3;UBERON:0000473,2.04e-14,14;UBERON:0000947,3.43e-14,4;UBERON:0001637,3.43e-14,4;UBERON:0004573,3.43e-14,4;UBERON:0003509,3.43e-14,4;UBERON:0004571,3.43e-14,4;UBERON:0010191,3.43e-14,4;UBERON:0004572,3.43e-14,4;UBERON:0003135,1.95e-13,15;UBERON:0003101,1.40e-12,16;UBERON:0000079,1.40e-12,16;UBERON:0004176,8.03e-12,17;UBERON:0009196,8.03e-12,17;UBERON:0009117,8.03e-12,17;UBERON:0000055,1.82e-11,5;UBERON:0007500,1.82e-11,5;UBERON:0001981,1.82e-11,5;UBERON:0002049,1.82e-11,5;UBERON:0007798,1.82e-11,5;UBERON:0004537,1.82e-11,5;UBERON:0006965,1.82e-11,5;UBERON:0000991,3.79e-11,18;UBERON:0005564,3.79e-11,18;UBERON:0003133,2.82e-08,24;UBERON:0005156,1.30e-07,26;UBERON:0000990,1.30e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9028013572429,2.93993100536592,2.9367480345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,1.36344258062446,0.519572009205738,1.7666978725517,0,26.9485602570067,10.1922095882658,7.11066703153331,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.4426971888646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0.777804753376191,0.516639293910924,0.675824501963113,1.05621514781179,1.8228613878153,2.30690557736564,2.17425708743405,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000147653 | |||
}} |
Revision as of 17:19, 12 September 2013
Short description: | p1@ENSMUST00000147653 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000147653_5end |
Coexpression cluster: | MCL_coexpression_mm9:1908 |
Association with transcript: | 30bp_to_ENSMUST00000147653_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 2.59e-19 | 3 |
smooth muscle cell | 1.03e-18 | 3 |
vascular associated smooth muscle cell | 1.03e-18 | 3 |
aortic smooth muscle cell | 1.03e-18 | 3 |
smooth muscle myoblast | 1.03e-18 | 3 |
muscle precursor cell | 1.21e-09 | 6 |
muscle cell | 1.21e-09 | 6 |
myoblast | 1.21e-09 | 6 |
mesodermal cell | 2.44e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.03e-18 | 3 |
blood vessel smooth muscle | 1.03e-18 | 3 |
arterial system smooth muscle | 1.03e-18 | 3 |
artery smooth muscle tissue | 1.03e-18 | 3 |
aorta smooth muscle tissue | 1.03e-18 | 3 |
testis | 2.04e-14 | 14 |
aorta | 3.43e-14 | 4 |
artery | 3.43e-14 | 4 |
systemic artery | 3.43e-14 | 4 |
arterial blood vessel | 3.43e-14 | 4 |
systemic arterial system | 3.43e-14 | 4 |
aortic system | 3.43e-14 | 4 |
arterial system | 3.43e-14 | 4 |
male reproductive organ | 1.95e-13 | 15 |
male organism | 1.40e-12 | 16 |
male reproductive system | 1.40e-12 | 16 |
external genitalia | 8.03e-12 | 17 |
indifferent external genitalia | 8.03e-12 | 17 |
indifferent gonad | 8.03e-12 | 17 |
vessel | 1.82e-11 | 5 |
epithelial tube open at both ends | 1.82e-11 | 5 |
blood vessel | 1.82e-11 | 5 |
vasculature | 1.82e-11 | 5 |
vascular system | 1.82e-11 | 5 |
blood vasculature | 1.82e-11 | 5 |
vascular cord | 1.82e-11 | 5 |
gonad | 3.79e-11 | 18 |
gonad primordium | 3.79e-11 | 18 |
reproductive organ | 2.82e-08 | 24 |
reproductive structure | 1.30e-07 | 26 |
reproductive system | 1.30e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.