FFCP PHASE1:Mm9::chr10:67599527..67599530,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71371|HGNC=|MCL_coexpression_id=246|UniProt=Q8BM75,Q3TRJ5|association_with_transcript=-153bp_to_ENSMUST00000165054,uc007fmf.1,uc007fmi.1_5end|description=CAGE_peak_9_at_Arid5b_5end|id=chr10:67599527..67599530,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000223,1.46e-08,20;CL:0002293,4.77e-07,3;CL:0000066,5.38e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000305,5.15e-19,1;UBERON:0005631,3.18e-07,3;UBERON:0000478,3.18e-07,3;UBERON:0000158,3.18e-07,3;UBERON:0004871,3.18e-07,3|phase1_expression=0,1.04692622291808,0.454999239389536,0.60492842261366,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.151452386666368,0,0,0.860423876981386,0,0,0,1.79210754838934,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,3.95511948374998,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0,0,0.136072998302656,0.512454881139399,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0.350296027101508,0,0.492502392237286,0.486412857275134,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0,0.738050739898011,0.156998727841375,0,0.592905254174298,0,0,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,0.549122826376163,2.87536413054709,0,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,0.923765950833023,0,0,0,0.469380496577004,0,0.238043640886014,0,0.472905432318573,0.664394068946325,0,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0.566153061577665,0,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0.484393280087717,0.361877549568935,0,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0.0897138566094757,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0.115884325944855,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.470546902076653,0.169229215783353,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0|short_description=p9@Arid5b}} | ||
|EntrezGene=71371 | |||
|HGNC= | |||
|MCL_coexpression_id=246 | |||
|UniProt=Q8BM75,Q3TRJ5 | |||
|association_with_transcript=-153bp_to_ENSMUST00000165054,uc007fmf.1,uc007fmi.1_5end | |||
|description=CAGE_peak_9_at_Arid5b_5end | |||
|id=chr10:67599527..67599530,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.46e-08,20;CL:0002293,4.77e-07,3;CL:0000066,5.38e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,5.15e-19,1;UBERON:0005631,3.18e-07,3;UBERON:0000478,3.18e-07,3;UBERON:0000158,3.18e-07,3;UBERON:0004871,3.18e-07,3 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0.60492842261366,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.151452386666368,0,0,0.860423876981386,0,0,0,1.79210754838934,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,3.95511948374998,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0,0,0.136072998302656,0.512454881139399,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0.350296027101508,0,0.492502392237286,0.486412857275134,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0,0.738050739898011,0.156998727841375,0,0.592905254174298,0,0,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,0.549122826376163,2.87536413054709,0,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,0.923765950833023,0,0,0,0.469380496577004,0,0.238043640886014,0,0.472905432318573,0.664394068946325,0,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0.566153061577665,0,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0.484393280087717,0.361877549568935,0,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0.0897138566094757,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0.115884325944855,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.470546902076653,0.169229215783353,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0 | |||
|short_description=p9@Arid5b | |||
}} |
Revision as of 17:13, 12 September 2013
Short description: | p9@Arid5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Arid5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:246 |
Association with transcript: | -153bp_to_ENSMUST00000165054, uc007fmf.1, uc007fmi.1_5end |
EntrezGene: | Arid5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.46e-08 | 20 |
epithelial cell of thymus | 4.77e-07 | 3 |
epithelial cell | 5.38e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
amnion | 5.15e-19 | 1 |
extraembryonic membrane | 3.18e-07 | 3 |
extraembryonic structure | 3.18e-07 | 3 |
membranous layer | 3.18e-07 | 3 |
somatic layer of lateral plate mesoderm | 3.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.