FFCP PHASE1:Mm9::chr10:62006563..62006574,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:62006563..62006574,+|id=chr10:62006563..62006574,+|ontology_enrichment_celltype=CL:0000838!1.93e-13!12;CL:0000542!2.59e-12!13;CL:0000051!2.59e-12!13;CL:0000624!3.49e-12!8;CL:0000988!4.62e-12!32;CL:0002032!4.62e-12!32;CL:0000037!4.62e-12!32;CL:0000566!4.62e-12!32;CL:0000837!4.62e-12!32;CL:0000893!1.66e-11!6;CL:0002489!1.66e-11!6;CL:0000898!1.66e-11!6;CL:0000809!1.66e-11!6;CL:0000810!1.66e-11!6;CL:0000895!1.66e-11!6;CL:0000808!1.66e-11!6;CL:0000894!1.66e-11!6;CL:0000806!1.66e-11!6;CL:0000807!1.66e-11!6;CL:0000805!1.66e-11!6;CL:0002425!1.66e-11!6;CL:0002436!1.66e-11!6;CL:0002427!1.66e-11!6;CL:0002428!1.66e-11!6;CL:0002429!1.66e-11!6;CL:0002433!1.66e-11!6;CL:0002431!1.66e-11!6;CL:0002432!1.66e-11!6;CL:0000084!1.80e-11!11;CL:0000827!1.80e-11!11;CL:0000791!9.23e-11!9;CL:0000789!9.23e-11!9;CL:0002420!9.23e-11!9;CL:0002419!9.23e-11!9;CL:0000790!9.23e-11!9;CL:0000738!3.96e-09!17;CL:0002087!3.96e-09!17;CL:0002320!1.34e-07!46;CL:0000134!1.34e-07!46;CL:0002031!2.65e-07!25|ontology_enrichment_celltype_v019_2=CL:0000355,4.50e-13,9|ontology_enrichment_disease=DOID:0060100!3.62e-10!3;DOID:4045!3.62e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.58e-37,3;DOID:4045,1.58e-37,3;DOID:0050686,3.24e-19,6|ontology_enrichment_uberon=UBERON:0002193!2.02e-08!48;UBERON:0002390!9.49e-08!45;UBERON:0003061!9.49e-08!45;UBERON:0004177!1.09e-07!29;UBERON:0002384!1.34e-07!46;UBERON:0002106!2.31e-07!6;UBERON:0004457!2.31e-07!6;UBERON:0000042!2.31e-07!6;UBERON:0004854!2.31e-07!6;UBERON:0009034!2.31e-07!6;UBERON:0002095!2.31e-07!6;UBERON:0004782!2.31e-07!6;UBERON:0003281!2.31e-07!6;UBERON:0009664!2.31e-07!6;UBERON:0002296!2.31e-07!6;UBERON:0005602!2.31e-07!6;UBERON:0001179!2.31e-07!6;UBERON:0006293!2.31e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.50e-13,9;UBERON:0002036,4.50e-13,9;UBERON:0002385,4.50e-13,9;UBERON:0000486,4.50e-13,9;UBERON:0007503,4.50e-13,9;UBERON:0001015,4.50e-13,9;UBERON:0002329,4.50e-13,9;UBERON:0003082,4.50e-13,9;UBERON:0003059,4.50e-13,9;UBERON:0007282,4.50e-13,9;UBERON:0004290,4.50e-13,9;UBERON:0009618,4.50e-13,9;UBERON:0000383,7.70e-12,10;UBERON:0007524,7.91e-11,11;UBERON:0003077,7.91e-11,11;UBERON:0007285,7.91e-11,11|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,1.17032263160997,0.171217968225505,0,0.171200729931206,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.906676722619,3.14114246384279,10.5881667845583,11.6117732442936,7.2826552954673,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0.849892149969277,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:62006563..62006574,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:62006563..62006574,+ | |||
|id=chr10:62006563..62006574,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.93e-13!12;CL:0000542!2.59e-12!13;CL:0000051!2.59e-12!13;CL:0000624!3.49e-12!8;CL:0000988!4.62e-12!32;CL:0002032!4.62e-12!32;CL:0000037!4.62e-12!32;CL:0000566!4.62e-12!32;CL:0000837!4.62e-12!32;CL:0000893!1.66e-11!6;CL:0002489!1.66e-11!6;CL:0000898!1.66e-11!6;CL:0000809!1.66e-11!6;CL:0000810!1.66e-11!6;CL:0000895!1.66e-11!6;CL:0000808!1.66e-11!6;CL:0000894!1.66e-11!6;CL:0000806!1.66e-11!6;CL:0000807!1.66e-11!6;CL:0000805!1.66e-11!6;CL:0002425!1.66e-11!6;CL:0002436!1.66e-11!6;CL:0002427!1.66e-11!6;CL:0002428!1.66e-11!6;CL:0002429!1.66e-11!6;CL:0002433!1.66e-11!6;CL:0002431!1.66e-11!6;CL:0002432!1.66e-11!6;CL:0000084!1.80e-11!11;CL:0000827!1.80e-11!11;CL:0000791!9.23e-11!9;CL:0000789!9.23e-11!9;CL:0002420!9.23e-11!9;CL:0002419!9.23e-11!9;CL:0000790!9.23e-11!9;CL:0000738!3.96e-09!17;CL:0002087!3.96e-09!17;CL:0002320!1.34e-07!46;CL:0000134!1.34e-07!46;CL:0002031!2.65e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.50e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.62e-10!3;DOID:4045!3.62e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.58e-37,3;DOID:4045,1.58e-37,3;DOID:0050686,3.24e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.02e-08!48;UBERON:0002390!9.49e-08!45;UBERON:0003061!9.49e-08!45;UBERON:0004177!1.09e-07!29;UBERON:0002384!1.34e-07!46;UBERON:0002106!2.31e-07!6;UBERON:0004457!2.31e-07!6;UBERON:0000042!2.31e-07!6;UBERON:0004854!2.31e-07!6;UBERON:0009034!2.31e-07!6;UBERON:0002095!2.31e-07!6;UBERON:0004782!2.31e-07!6;UBERON:0003281!2.31e-07!6;UBERON:0009664!2.31e-07!6;UBERON:0002296!2.31e-07!6;UBERON:0005602!2.31e-07!6;UBERON:0001179!2.31e-07!6;UBERON:0006293!2.31e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.50e-13,9;UBERON:0002036,4.50e-13,9;UBERON:0002385,4.50e-13,9;UBERON:0000486,4.50e-13,9;UBERON:0007503,4.50e-13,9;UBERON:0001015,4.50e-13,9;UBERON:0002329,4.50e-13,9;UBERON:0003082,4.50e-13,9;UBERON:0003059,4.50e-13,9;UBERON:0007282,4.50e-13,9;UBERON:0004290,4.50e-13,9;UBERON:0009618,4.50e-13,9;UBERON:0000383,7.70e-12,10;UBERON:0007524,7.91e-11,11;UBERON:0003077,7.91e-11,11;UBERON:0007285,7.91e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,1.17032263160997,0.171217968225505,0,0.171200729931206,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.906676722619,3.14114246384279,10.5881667845583,11.6117732442936,7.2826552954673,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0.849892149969277,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:62006563..62006574,+ | |||
}} |
Revision as of 17:06, 12 September 2013
Short description: | p@chr10:62006563..62006574, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:62006563..62006574, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.50e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.50e-13 | 9 |
striated muscle tissue | 4.50e-13 | 9 |
muscle tissue | 4.50e-13 | 9 |
multilaminar epithelium | 4.50e-13 | 9 |
epithelial vesicle | 4.50e-13 | 9 |
musculature | 4.50e-13 | 9 |
somite | 4.50e-13 | 9 |
myotome | 4.50e-13 | 9 |
presomitic mesoderm | 4.50e-13 | 9 |
presumptive segmental plate | 4.50e-13 | 9 |
dermomyotome | 4.50e-13 | 9 |
trunk paraxial mesoderm | 4.50e-13 | 9 |
musculature of body | 7.70e-12 | 10 |
dense mesenchyme tissue | 7.91e-11 | 11 |
paraxial mesoderm | 7.91e-11 | 11 |
presumptive paraxial mesoderm | 7.91e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.58e-37 | 3 |
muscle cancer | 1.58e-37 | 3 |
organ system cancer | 3.24e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.