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FFCP PHASE1:Mm9::chr10:56097129..56097144,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=14609|HGNC=|UniProt=P23242,Q544I7,Q8C4N2|association_with_transcript=23bp_to_ENSMUST00000068581,NM_010288,uc007fcd.2,uc007fce.2_5end|description=CAGE_peak_1_at_Gja1_5end|id=chr10:56097129..56097144,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.41e-12!102;UBERON:0000924!1.41e-12!102;UBERON:0006601!1.41e-12!102;UBERON:0002346!9.37e-10!71;UBERON:0003075!9.37e-10!71;UBERON:0007284!9.37e-10!71;UBERON:0001017!1.67e-08!73;UBERON:0005743!1.67e-08!73;UBERON:0004535!2.85e-08!23;UBERON:0001009!2.85e-08!23;UBERON:0000073!4.65e-08!75;UBERON:0001016!4.65e-08!75;UBERON:0000033!4.94e-08!63;UBERON:0007100!9.23e-08!18;UBERON:0000948!9.23e-08!18;UBERON:0005498!9.23e-08!18;UBERON:0004140!9.23e-08!18;UBERON:0009881!9.23e-08!18;UBERON:0004141!9.23e-08!18;UBERON:0003084!9.23e-08!18;UBERON:0007005!9.23e-08!18;UBERON:0004139!9.23e-08!18;UBERON:0004291!9.23e-08!18;UBERON:0000955!2.72e-07!50;UBERON:0006238!2.72e-07!50;UBERON:0000025!3.26e-07!114;UBERON:0001049!4.03e-07!52;UBERON:0005068!4.03e-07!52;UBERON:0006241!4.03e-07!52;UBERON:0007135!4.03e-07!52;UBERON:0002616!5.21e-07!49;UBERON:0004872!5.91e-07!33;UBERON:0000479!6.75e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.83e-16,92;UBERON:0004121,3.15e-11,95;UBERON:0000924,3.15e-11,95;UBERON:0006601,3.15e-11,95;UBERON:0010371,1.51e-09,73;UBERON:0002346,1.47e-08,64;UBERON:0003075,1.47e-08,64;UBERON:0007284,1.47e-08,64;UBERON:0001017,1.63e-08,73;UBERON:0004535,2.77e-08,23;UBERON:0001009,2.77e-08,23;UBERON:0001016,4.53e-08,75;UBERON:0007100,9.01e-08,18;UBERON:0000948,9.01e-08,18;UBERON:0005498,9.01e-08,18;UBERON:0004140,9.01e-08,18;UBERON:0009881,9.01e-08,18;UBERON:0004141,9.01e-08,18;UBERON:0003084,9.01e-08,18;UBERON:0007005,9.01e-08,18;UBERON:0004139,9.01e-08,18;UBERON:0004291,9.01e-08,18;UBERON:0000073,9.63e-08,54;UBERON:0000025,3.03e-07,114;UBERON:0001049,3.94e-07,52;UBERON:0005068,3.94e-07,52;UBERON:0006241,3.94e-07,52;UBERON:0007135,3.94e-07,52;UBERON:0000479,5.06e-07,349;UBERON:0004872,5.78e-07,33|phase1_expression=8.0074423552397,0.697950815278722,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,4.66353666541928,6.07425802169478,1.39912375625629,0.473193248037357,0.411343300817216,0.42438965179803,56.2136147898571,0.397163804803541,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.57327890158,121.550940532198,123.894057709135,163.51979096874,40.552679086763,41.7403747195496,72.716782253782,371.943922258588,64.6886539642372,0.167782606057736,0,0,16.4646039063006,17.1920063963254,60.3336347964607,7.68802551266472,6.87688273053643,25.3532561402472,135.537812827653,223.212993823896,15.2982951937838,10.8775299882367,12.7886420690298,114.147642107512,135.629061778509,19.7010263386108,18.3608076131099,19.7705463670299,137.112472513826,169.627039450839,5.87955836231779,6.22995561618536,3.67687514644008,213.624809138814,168.036536920107,197.538001767529,8.83638127792299,13.2657083223494,30.7338888628488,184.819145338914,190.213762190708,218.043099577508,118.146062774941,121.015928679238,32.4335035736023,19.6130840732947,26.2989029171614,81.4519213251715,24.9522924324602,0,1.07940638327563,1.29955283489534,1.34408066129201,57.5822122540183,212.867472899994,176.134911120745,183.383239170867,4.08445917352373,71.862827352018,12.7402619853323,0,29.0097994955027,31.4166233189122,30.331466700887,19.9821789508355,11.6522047641227,38.4465140177896,57.9440991398894,161.062238027123,168.579928494179,169.5629706217,159.803052997423,114.105264927345,57.5964274821091,100.062754988579,38.0382537338446,117.766266761714,182.415094248285,256.014133655397,55.9175283654366,150.196548866924,169.442385812085,19.9256503062701,0.838705871541442,1.79970819298022,0.635351135365324,225.884284222473,119.407657335662,25.6334878310243,140.450050715359,136.296338757066,189.502696638319,189.660036526209,81.2678123525524,328.807623322476,186.003950207185,50.9269291245267,157.185495098946,120.238800618706,137.387405041481,134.579402327294,88.4474488967262,117.095940340353,98.5742142368347,129.092981998769,67.6883497809125,69.7801435819253,65.6297693131529,116.831325383897,214.09638190371,344.073140523901,349.21228548428,68.4677877855617,0.702213187313235,0.257347907114715,2.27330799516474,130.903488242437,189.497056464726,203.650191512408,245.267546066278,311.281014624393,303.289143936586,416.23576110323,412.067944549815,358.703131751945,475.248846550132,628.925554887014,533.027422764001,580.121550103719,528.896227736141,439.660227858978,181.269935662278,59.0672475057093,0.660837565967596,13.2225283331772,36.6855790920602,25.7782705765087,25.6446248030966,19.3616183638409,17.5678654637448,24.158654516295,32.7425052465713,22.3990578424655,34.1815883968367,42.3777285447651,47.3762731699462,35.9527763461689,32.8529835809535,28.2780608021201,65.6250937297663,48.66986637174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|EntrezGene=14609
|HGNC=
|UniProt=P23242,Q544I7,Q8C4N2
|association_with_transcript=23bp_to_ENSMUST00000068581,NM_010288,uc007fcd.2,uc007fce.2_5end
|description=CAGE_peak_1_at_Gja1_5end
|id=chr10:56097129..56097144,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.41e-12!102;UBERON:0000924!1.41e-12!102;UBERON:0006601!1.41e-12!102;UBERON:0002346!9.37e-10!71;UBERON:0003075!9.37e-10!71;UBERON:0007284!9.37e-10!71;UBERON:0001017!1.67e-08!73;UBERON:0005743!1.67e-08!73;UBERON:0004535!2.85e-08!23;UBERON:0001009!2.85e-08!23;UBERON:0000073!4.65e-08!75;UBERON:0001016!4.65e-08!75;UBERON:0000033!4.94e-08!63;UBERON:0007100!9.23e-08!18;UBERON:0000948!9.23e-08!18;UBERON:0005498!9.23e-08!18;UBERON:0004140!9.23e-08!18;UBERON:0009881!9.23e-08!18;UBERON:0004141!9.23e-08!18;UBERON:0003084!9.23e-08!18;UBERON:0007005!9.23e-08!18;UBERON:0004139!9.23e-08!18;UBERON:0004291!9.23e-08!18;UBERON:0000955!2.72e-07!50;UBERON:0006238!2.72e-07!50;UBERON:0000025!3.26e-07!114;UBERON:0001049!4.03e-07!52;UBERON:0005068!4.03e-07!52;UBERON:0006241!4.03e-07!52;UBERON:0007135!4.03e-07!52;UBERON:0002616!5.21e-07!49;UBERON:0004872!5.91e-07!33;UBERON:0000479!6.75e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.83e-16,92;UBERON:0004121,3.15e-11,95;UBERON:0000924,3.15e-11,95;UBERON:0006601,3.15e-11,95;UBERON:0010371,1.51e-09,73;UBERON:0002346,1.47e-08,64;UBERON:0003075,1.47e-08,64;UBERON:0007284,1.47e-08,64;UBERON:0001017,1.63e-08,73;UBERON:0004535,2.77e-08,23;UBERON:0001009,2.77e-08,23;UBERON:0001016,4.53e-08,75;UBERON:0007100,9.01e-08,18;UBERON:0000948,9.01e-08,18;UBERON:0005498,9.01e-08,18;UBERON:0004140,9.01e-08,18;UBERON:0009881,9.01e-08,18;UBERON:0004141,9.01e-08,18;UBERON:0003084,9.01e-08,18;UBERON:0007005,9.01e-08,18;UBERON:0004139,9.01e-08,18;UBERON:0004291,9.01e-08,18;UBERON:0000073,9.63e-08,54;UBERON:0000025,3.03e-07,114;UBERON:0001049,3.94e-07,52;UBERON:0005068,3.94e-07,52;UBERON:0006241,3.94e-07,52;UBERON:0007135,3.94e-07,52;UBERON:0000479,5.06e-07,349;UBERON:0004872,5.78e-07,33
|phase1_expression=8.0074423552397,0.697950815278722,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,4.66353666541928,6.07425802169478,1.39912375625629,0.473193248037357,0.411343300817216,0.42438965179803,56.2136147898571,0.397163804803541,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.57327890158,121.550940532198,123.894057709135,163.51979096874,40.552679086763,41.7403747195496,72.716782253782,371.943922258588,64.6886539642372,0.167782606057736,0,0,16.4646039063006,17.1920063963254,60.3336347964607,7.68802551266472,6.87688273053643,25.3532561402472,135.537812827653,223.212993823896,15.2982951937838,10.8775299882367,12.7886420690298,114.147642107512,135.629061778509,19.7010263386108,18.3608076131099,19.7705463670299,137.112472513826,169.627039450839,5.87955836231779,6.22995561618536,3.67687514644008,213.624809138814,168.036536920107,197.538001767529,8.83638127792299,13.2657083223494,30.7338888628488,184.819145338914,190.213762190708,218.043099577508,118.146062774941,121.015928679238,32.4335035736023,19.6130840732947,26.2989029171614,81.4519213251715,24.9522924324602,0,1.07940638327563,1.29955283489534,1.34408066129201,57.5822122540183,212.867472899994,176.134911120745,183.383239170867,4.08445917352373,71.862827352018,12.7402619853323,0,29.0097994955027,31.4166233189122,30.331466700887,19.9821789508355,11.6522047641227,38.4465140177896,57.9440991398894,161.062238027123,168.579928494179,169.5629706217,159.803052997423,114.105264927345,57.5964274821091,100.062754988579,38.0382537338446,117.766266761714,182.415094248285,256.014133655397,55.9175283654366,150.196548866924,169.442385812085,19.9256503062701,0.838705871541442,1.79970819298022,0.635351135365324,225.884284222473,119.407657335662,25.6334878310243,140.450050715359,136.296338757066,189.502696638319,189.660036526209,81.2678123525524,328.807623322476,186.003950207185,50.9269291245267,157.185495098946,120.238800618706,137.387405041481,134.579402327294,88.4474488967262,117.095940340353,98.5742142368347,129.092981998769,67.6883497809125,69.7801435819253,65.6297693131529,116.831325383897,214.09638190371,344.073140523901,349.21228548428,68.4677877855617,0.702213187313235,0.257347907114715,2.27330799516474,130.903488242437,189.497056464726,203.650191512408,245.267546066278,311.281014624393,303.289143936586,416.23576110323,412.067944549815,358.703131751945,475.248846550132,628.925554887014,533.027422764001,580.121550103719,528.896227736141,439.660227858978,181.269935662278,59.0672475057093,0.660837565967596,13.2225283331772,36.6855790920602,25.7782705765087,25.6446248030966,19.3616183638409,17.5678654637448,24.158654516295,32.7425052465713,22.3990578424655,34.1815883968367,42.3777285447651,47.3762731699462,35.9527763461689,32.8529835809535,28.2780608021201,65.6250937297663,48.6698663717445,47.3372489826938,43.5813841588973,28.7049681008086,20.9706101472052,9.92813632850839,10.3327103585722,8.32093257559286,8.88459580236964,6.52195779591728,14.0149888801519,6.6830058338489,4.04751802292737,4.26006254915856,4.58236603529592,5.34714288740982,7.48009957372108,4.86405680325106,4.66754402419738,8.62609239164127,12.6527922207291,10.9213185590096,6.81962970457202,5.56131981917928,4.3419916922703,44.5255188301517,39.7931964718018,46.6079832624194,29.0264096675572,29.8056615326398,95.1435542269514,142.11205360895,75.9069890166837,77.556490900246,88.1429464802124,105.399602082599,71.7721318454932,77.0175019121894,55.4005894367189,0,0,22.1293922858566,29.5252318546064,252.064426280833,246.496176903403,16.3934945376675,87.3549408127131,56.1604630560937,51.1474755028596,84.4459719112572,167.756096162692,137.68958058292,83.5075765827056,66.7937657763576,59.035683298085,60.0837422478716,160.981979527325,644.40798684554,77.1024063879215,56.6846618550445,56.4197820566071,7.96470830039777,43.2149532355867,29.0230614686161,22.4440044909519,23.9194533233426,35.9699123094395,36.179961043551,38.8981090540931,38.8582142439346,37.2923374364263,14.7586052004998,22.6898195146011,25.8734100372879,130.004109890606,187.958167536342,249.488308776773,327.724751770922,509.421343071514,423.549179029859,156.494983844904,724.900906208801,151.459930667631,3.30792597082443,225.729280276886,284.823248691577,484.192161323235,723.993266379023,898.34314430472,42.2647213113284,268.495837311218,35.0285305635598,22.0833948720648,11.8524497516615,11.1137389632768,20.2307457027117,19.4461447225544,2.03974115992626,0.979660166265606,1.65839968565309,119.333827251889,34.4806233003438,30.0912811347736,42.4460989429679,93.8806449104965,87.7817506259634,122.861419556572,103.399473112395,131.663238817967,21.256855619854,19.2615187056947,16.3470952218415,133.667792163317,130.54674897065,191.923322895575,222.413216028653,334.871040722722,296.796456535112,254.028754830547,139.043490708493,61.8455349314575,32.5473907071388,5.05617793005085,22.5024988972082,17.3581517608558,10.3936658382236,8.77230808770659,15.6958270277199,6.12996792551841,7.38447635872886,6.46185279668145,4.41999478598999,4.63800451629466,3.41102582589133,3.65604998233252,3.03879945672079,315.155233225144,1.10992976687032,1.25599399253266,2.18250001273302,11.5913756419314,247.177820169207,86.4475666541491,404.084394564039,5.01572104035363,177.332078581759,142.700823317225,136.922027712016,121.672053099331,118.519275920321,126.90617476147,120.829027541493,94.5674526770863,108.754178156209,98.8922195445976,26.5695609815492,70.2283777185815,70.6837127822115,103.806568188162,28.0881637921496,34.5625795886027,65.5627847014765,63.2527625723405,60.0118921936695,63.679697364477,62.8628663727795,70.7348780197786,50.191848003857,57.1744610975483,60.9390325619057,62.8707672493657,62.577536010222,59.6089491232849,65.5216582277258,70.2138849041075,63.4308116913018,63.0039111865648,59.3706112968829,70.0569728167823,60.7005503678882,61.9378929767072,62.5613667224882,72.3441706454068,56.4945113598785,69.5816416855596,58.7243339714662,55.8520415069445,66.2954289934897,64.1438522509899,130.597775634233,189.356418076963,161.646741435777,140.09592723949,84.1668661102911,138.531411207056,114.774578632109
|short_description=p1@Gja1
}}

Revision as of 16:54, 12 September 2013

Short description:p1@Gja1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gja1_5end
Coexpression cluster:NA
Association with transcript: 23bp_to_ENSMUST00000068581, NM_010288, uc007fcd.2, uc007fce.2_5end
EntrezGene:Gja1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gja1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A356.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8115.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9121.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3123.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7163.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C240.55
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B841.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C372.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C4371.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C464.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C560.33
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C725.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6135.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1223.21
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C8114.15
Mouse Microglia, donor2.CNhs12634.11736-123E8135.63
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1137.11
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5169.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3213.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3168.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7197.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4184.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5190.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6218.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6118.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6121.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E132.43
Mouse Schwann, donor1.CNhs12507.11728-123D919.61
Mouse Schwann, donor2.CNhs12573.11746-123F926.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G381.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A757.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7212.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3176.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8183.38
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H171.86
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G129.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G231.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.33
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.98
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D738.45
adrenal gland, embryo E14.CNhs11038.406-44C557.94
adrenal gland, embryo E16.CNhs11004.1254-43D6161.06
adrenal gland, embryo E17.CNhs11043.1263-45I1168.58
adrenal gland, embryo E18.CNhs11026.1262-18F5169.56
adrenal gland, neonate N00.CNhs11191.1311-23C1159.80
adrenal gland, neonate N25.CNhs11223.1377-27I3114.11
amnion, adult pregnant day17.5.CNhs10488.583-22A857.60
aorta, adult.CNhs10498.46-23H1100.06
bone (os femoris), adult.CNhs10483.56-12G238.04
bone (os femoris), neonate N02.CNhs11227.1985-43F5117.77
bone (os femoris), neonate N16.CNhs11225.1525-43A6182.42
bone (os femoris), neonate N20.CNhs11195.1350-25C3256.01
cecum, adult.CNhs10467.37-13H455.92
cerebellum, adult.CNhs10494.15-8B2150.20
cerebellum, neonate N30.CNhs11135.1395-42I2169.44
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A4225.88
corpus striatum, adult.CNhs10487.19-21D8119.41
corpus striatum, neonate N00.CNhs11226.630-43F125.63
cortex, adult.CNhs10473.12-14D5140.45
cortex, neonate N30.CNhs11107.1392-42F2136.30
diencephalon, adult.CNhs10482.20-12F2189.50
diencephalon, neonate N30.CNhs11201.1388-42B2189.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B181.27
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2328.81
epididymis, adult.CNhs10490.58-23B2186.00
eyeball, adult.CNhs10484.31-12G450.93
eyeball, embryo E12.CNhs11016.345-16C6157.19
eyeball, embryo E14.CNhs10521.399-16E2120.24
eyeball, embryo E15.CNhs10593.426-16C9137.39
eyeball, embryo E17.CNhs11023.1261-18D4134.58
eyeball, neonate N00.CNhs11207.633-15C688.45
eyeball, neonate N01.CNhs11140.1532-43E7117.10
eyeball, neonate N02.CNhs11205.1551-44G898.57
eyeball, neonate N16.CNhs11188.777-19A2129.09
forelimb, embryo E11.CNhs10596.335-25E267.69
forelimb, embryo E12.CNhs10600.359-14H269.78
forelimb, embryo E13.CNhs10589.384-1E265.63
forelimb, embryo E14.CNhs10577.413-26A8116.83
forelimb, embryo E15.CNhs11007.437-20E7214.10
forelimb, embryo E17.CNhs10598.1517-43C4344.07
forelimb, embryo E18.CNhs11008.1520-43B5349.21
gonad, embryo E13.CNhs11044.1564-45I668.47
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E9130.90
heart, embryo E12.CNhs11015.353-12F5189.50
heart, embryo E13.CNhs11013.376-3I9203.65
heart, embryo E14.CNhs10597.403-26D4245.27
heart, embryo E15.CNhs11017.431-16C8311.28
heart, embryo E16.CNhs11021.457-17C6303.29
heart, embryo E17.CNhs11025.479-18E5416.24
heart, embryo E18.CNhs11030.1283-20G3412.07
heart, neonate N00.CNhs11213.639-21E3358.70
heart, neonate N03.CNhs11221.1349-25I2475.25
heart, neonate N10.CNhs11118.749-24G1628.93
heart, neonate N16.CNhs11209.782-15G1533.03
heart, neonate N20.CNhs11127.821-26I6580.12
heart, neonate N25.CNhs11196.1351-25D3528.90
heart, neonate N30.CNhs11202.1390-42D2439.66
hippocampus, adult.CNhs10478.13-16E8181.27
hippocampus, neonate N00.CNhs11228.627-43G159.07
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A313.22
intestine, embryo E12.CNhs11019.1251-16I536.69
intestine, embryo E13.CNhs11010.381-16D525.78
intestine, embryo E15.CNhs10602.976-16D825.64
intestine, embryo E16.CNhs10585.463-22H419.36
intestine, embryo E17.CNhs10582.482-18D317.57
intestine, embryo E18.CNhs10526.1289-20F724.16
intestine, neonate N00.CNhs11126.644-26D132.74
intestine, neonate N01.CNhs11192.1322-23E922.40
intestine, neonate N06.CNhs11102.688-20B834.18
intestine, neonate N07.CNhs11095.720-20F242.38
intestine, neonate N10.CNhs11098.755-23A547.38
intestine, neonate N20.CNhs11187.827-18D135.95
intestine, neonate N25.CNhs11121.1352-25E332.85
intestine, neonate N30.CNhs11131.1384-42G128.28
kidney, embryo E14.CNhs10606.411-4I965.63
kidney, embryo E15.CNhs10997.434-16F848.67
kidney, embryo E16.CNhs10584.464-22A547.34
kidney, embryo E17.CNhs11028.483-18I243.58
kidney, embryo E18.CNhs11001.1288-20C728.70
kidney, neonate N00.CNhs11214.646-21G720.97
kidney, neonate N10.CNhs11206.758-6D59.93
kidney, neonate N20.CNhs11113.832-19I110.33
kidney, neonate N25.CNhs11122.1353-25F38.32
kidney, neonate N30.CNhs11203.1385-42H18.88
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F814.01
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F44.86
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B144.53
lung, embryo E12.CNhs10522.354-16G239.79
lung, embryo E14.CNhs10604.404-26F846.61
lung, embryo E15.CNhs11020.432-17C529.03
lung, embryo E16.CNhs10998.458-17B629.81
lung, embryo E17.CNhs10605.480-44A695.14
lung, embryo E18.CNhs10583.1287-20I6142.11
lung, neonate N00.CNhs11224.640-42C675.91
lung, neonate N06.CNhs11212.683-20E577.56
lung, neonate N07.CNhs11111.715-19A388.14
lung, neonate N10.CNhs11219.750-23E6105.40
lung, neonate N20.CNhs11109.822-18A471.77
lung, neonate N25.CNhs11119.1359-25C777.02
lung, neonate N30.CNhs11133.1394-42H255.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B622.13
mammary gland, adult pregnant day19.CNhs10476.588-5H229.53
medulla oblongata, adult.CNhs10477.17-12C2252.06
medulla oblongata, neonate N30.CNhs11200.1396-42A3246.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C287.35
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E156.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E251.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E384.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7167.76
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8137.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D983.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D466.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D559.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D660.08
olfactory brain, adult.CNhs10489.18-22I9160.98
ovary, adult.CNhs10507.91-2I7644.41
ovary, embryo E18.CNhs11040.505-44H777.10
ovary, neonate N00.CNhs11217.1299-22I456.68
oviduct, adult pregnant day01.CNhs10500.988-6G656.42
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F443.21
pancreas, embryo E15.CNhs11042.1556-45F229.02
pancreas, embryo E16.CNhs11003.460-26E522.44
pancreas, embryo E17.CNhs10599.1558-45G323.92
pancreas, embryo E18.CNhs10580.1535-43I735.97
pancreas, neonate N00.CNhs11105.645-26G936.18
pancreas, neonate N01.CNhs11138.1531-43D738.90
pancreas, neonate N02.CNhs11139.1539-43D838.86
pancreas, neonate N16.CNhs11136.787-43B637.29
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G825.87
pituitary gland, embryo E12.CNhs11018.346-16E6130.00
pituitary gland, embryo E13.CNhs11009.370-44C7187.96
pituitary gland, embryo E14.CNhs11037.398-44A5249.49
pituitary gland, embryo E15.CNhs10592.427-16B9327.72
pituitary gland, embryo E16.CNhs11036.449-43F6509.42
pituitary gland, embryo E17.CNhs11039.1265-44F5423.55
pituitary gland, neonate N00.CNhs11190.1308-22E9156.49
placenta, adult pregnant day10.CNhs10472.539-13I7724.90
placenta, adult pregnant day17.CNhs10464.577-18G3151.46
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C3225.73
skin, neonate N00.CNhs11124.650-25G4284.82
skin, neonate N03.CNhs11215.662-22H3484.19
skin, neonate N06.CNhs11097.693-20I5723.99
skin, neonate N10.CNhs11108.762-6C4898.34
small intestine, neonate N16.CNhs11114.790-21I142.26
spinal cord, adult.CNhs10505.24-13C9268.50
spleen, adult.CNhs10465.25-2G235.03
spleen, embryo E16.CNhs11035.461-43C122.08
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D111.11
spleen, neonate N20.CNhs11112.824-19H120.23
spleen, neonate N25.CNhs11099.1354-25G319.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H6119.33
stomach, embryo E12.CNhs10588.356-43E334.48
stomach, embryo E15.CNhs10603.1252-16G830.09
stomach, embryo E16.CNhs11022.459-17D442.45
stomach, embryo E17.CNhs11006.1035-18D593.88
stomach, embryo E18.CNhs10999.1286-20C687.78
stomach, neonate N03.CNhs11193.1340-24B8122.86
stomach, neonate N07.CNhs11210.718-18A9103.40
stomach, neonate N25.CNhs11104.1355-25E4131.66
stomach, neonate N30.CNhs11134.1386-42I121.26
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G516.35
testis, embryo E13.CNhs11031.389-23F5133.67
testis, embryo E15.CNhs11034.443-27C5130.55
testis, embryo E16.CNhs11033.470-26G5191.92
testis, embryo E17.CNhs11029.486-18I5222.41
testis, embryo E18.CNhs11027.503-18G5334.87
testis, neonate N00.CNhs11189.1300-22B7296.80
testis, neonate N07.CNhs11222.726-26I4254.03
testis, neonate N10.CNhs11204.763-44D9139.04
testis, neonate N20.CNhs11110.839-18H361.85
testis, neonate N30.CNhs11130.1391-42E232.55
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I422.50
thymus, embryo E15.CNhs11005.430-45I217.36
thymus, embryo E16.CNhs11002.456-26C510.39
thymus, embryo E17.CNhs10581.478-18C18.77
thymus, embryo E18.CNhs10595.1273-19G415.70
thymus, neonate N02.CNhs11181.1541-43F86.13
thymus, neonate N03.CNhs11137.2104-43C77.38
thymus, neonate N06.CNhs11197.681-26C46.46
thymus, neonate N07.CNhs11211.713-19D34.42
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B4315.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E411.59
uterus, adult pregnant day19.CNhs10497.590-15F5247.18
uterus, adult.CNhs10509.92-27E586.45
vagina, adult.CNhs10502.89-27D5404.08
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1177.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2142.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3136.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7121.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4118.52
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5126.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6120.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A794.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8108.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A998.89
whole body, embryo E11.CNhs11014.324-5I826.57
whole body, embryo E12.CNhs10587.857-27C970.23
whole body, embryo E13.CNhs10512.372-23H270.68
whole body, embryo E14.5.CNhs10578.420-27D2103.81
whole body, embryo E14.CNhs10519.395-14B128.09
whole body, embryo E16.CNhs10514.453-14F234.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G565.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G563.25
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G560.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G563.68
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G562.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G570.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G550.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G557.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G560.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G562.87
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G562.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G559.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G565.52
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G570.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G563.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G563.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G559.37
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G570.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G560.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G561.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G562.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G572.34
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G556.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G569.58
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G558.72
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G555.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G566.30
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G564.14
whole body, embryo E17.5.CNhs10513.490-9F9130.60
whole body, embryo E17.CNhs10517.475-3I5189.36
whole body, embryo E18.CNhs10516.493-3B3161.65
whole body, neonate N00.CNhs10525.657-19C2140.10
whole body, neonate N01.CNhs10576.659-23C684.17
whole body, neonate N06.CNhs10515.692-21D1138.53
whole body, neonate N10.CNhs10518.761-6B4114.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest6.83e-1692
ectoderm-derived structure3.15e-1195
ectoderm3.15e-1195
presumptive ectoderm3.15e-1195
ecto-epithelium1.51e-0973
neurectoderm1.47e-0864
neural plate1.47e-0864
presumptive neural plate1.47e-0864
central nervous system1.63e-0873
cardiovascular system2.77e-0823
circulatory system2.77e-0823
nervous system4.53e-0875
primary circulatory organ9.01e-0818
heart9.01e-0818
primitive heart tube9.01e-0818
primary heart field9.01e-0818
anterior lateral plate mesoderm9.01e-0818
heart tube9.01e-0818
heart primordium9.01e-0818
cardiac mesoderm9.01e-0818
cardiogenic plate9.01e-0818
heart rudiment9.01e-0818
regional part of nervous system9.63e-0854
tube3.03e-07114
neural tube3.94e-0752
neural rod3.94e-0752
future spinal cord3.94e-0752
neural keel3.94e-0752
tissue5.06e-07349
splanchnic layer of lateral plate mesoderm5.78e-0733







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