FFCP PHASE1:Mm9::chr10:45008974..45009008,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78977|HGNC=|MCL_coexpression_id=329|UniProt=Q9ES81,E0CZB6|association_with_transcript=-102bp_to_ENSMUST00000019994,NM_024286,uc007ezy.1,uc011xdo.1_5end|description=CAGE_peak_2_at_Popdc3_5end|id=chr10:45008974..45009008,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.40e-15!18;UBERON:0000948!3.40e-15!18;UBERON:0005498!3.40e-15!18;UBERON:0004140!3.40e-15!18;UBERON:0009881!3.40e-15!18;UBERON:0004141!3.40e-15!18;UBERON:0003084!3.40e-15!18;UBERON:0007005!3.40e-15!18;UBERON:0004139!3.40e-15!18;UBERON:0004291!3.40e-15!18;UBERON:0004872!6.60e-13!33;UBERON:0004535!5.29e-11!23;UBERON:0001009!5.29e-11!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.66e-25,18;UBERON:0000948,3.66e-25,18;UBERON:0005498,3.66e-25,18;UBERON:0004140,3.66e-25,18;UBERON:0009881,3.66e-25,18;UBERON:0004141,3.66e-25,18;UBERON:0003084,3.66e-25,18;UBERON:0007005,3.66e-25,18;UBERON:0004139,3.66e-25,18;UBERON:0004291,3.66e-25,18;UBERON:0004535,8.95e-20,23;UBERON:0001009,8.95e-20,23;UBERON:0004872,1.03e-18,33;UBERON:0003103,1.06e-10,43;UBERON:0003914,8.37e-10,47;UBERON:0003081,3.43e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,2.36117078096885,2.77680803197281,1.39520366850245,1.87791380979733,4.55384835231961,1.48103864922132,0.820837320395476,0.243206428637567,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0.119372344003136,0,0,0.370850604021019,0,0.82554747185289,1.66675074632741,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p2@Popdc3}} | ||
|EntrezGene=78977 | |||
|HGNC= | |||
|MCL_coexpression_id=329 | |||
|UniProt=Q9ES81,E0CZB6 | |||
|association_with_transcript=-102bp_to_ENSMUST00000019994,NM_024286,uc007ezy.1,uc011xdo.1_5end | |||
|description=CAGE_peak_2_at_Popdc3_5end | |||
|id=chr10:45008974..45009008,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.40e-15!18;UBERON:0000948!3.40e-15!18;UBERON:0005498!3.40e-15!18;UBERON:0004140!3.40e-15!18;UBERON:0009881!3.40e-15!18;UBERON:0004141!3.40e-15!18;UBERON:0003084!3.40e-15!18;UBERON:0007005!3.40e-15!18;UBERON:0004139!3.40e-15!18;UBERON:0004291!3.40e-15!18;UBERON:0004872!6.60e-13!33;UBERON:0004535!5.29e-11!23;UBERON:0001009!5.29e-11!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.66e-25,18;UBERON:0000948,3.66e-25,18;UBERON:0005498,3.66e-25,18;UBERON:0004140,3.66e-25,18;UBERON:0009881,3.66e-25,18;UBERON:0004141,3.66e-25,18;UBERON:0003084,3.66e-25,18;UBERON:0007005,3.66e-25,18;UBERON:0004139,3.66e-25,18;UBERON:0004291,3.66e-25,18;UBERON:0004535,8.95e-20,23;UBERON:0001009,8.95e-20,23;UBERON:0004872,1.03e-18,33;UBERON:0003103,1.06e-10,43;UBERON:0003914,8.37e-10,47;UBERON:0003081,3.43e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,2.36117078096885,2.77680803197281,1.39520366850245,1.87791380979733,4.55384835231961,1.48103864922132,0.820837320395476,0.243206428637567,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0.119372344003136,0,0,0.370850604021019,0,0.82554747185289,1.66675074632741,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Popdc3 | |||
}} |
Revision as of 16:48, 12 September 2013
Short description: | p2@Popdc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Popdc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:329 |
Association with transcript: | -102bp_to_ENSMUST00000019994, NM_024286, uc007ezy.1, uc011xdo.1_5end |
EntrezGene: | Popdc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.66e-25 | 18 |
heart | 3.66e-25 | 18 |
primitive heart tube | 3.66e-25 | 18 |
primary heart field | 3.66e-25 | 18 |
anterior lateral plate mesoderm | 3.66e-25 | 18 |
heart tube | 3.66e-25 | 18 |
heart primordium | 3.66e-25 | 18 |
cardiac mesoderm | 3.66e-25 | 18 |
cardiogenic plate | 3.66e-25 | 18 |
heart rudiment | 3.66e-25 | 18 |
cardiovascular system | 8.95e-20 | 23 |
circulatory system | 8.95e-20 | 23 |
splanchnic layer of lateral plate mesoderm | 1.03e-18 | 33 |
compound organ | 1.06e-10 | 43 |
epithelial tube | 8.37e-10 | 47 |
lateral plate mesoderm | 3.43e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.