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FFCP PHASE1:Mm9::chr10:33739434..33739444,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=100039252,66521|HGNC=|UniProt=Q9CQK7|association_with_transcript=-4bp_to_ENSMUST00000019917_5end|description=CAGE_peak_4_at_Gm12693_5end,CAGE_peak_4_at_Rwdd1_5end|id=chr10:33739434..33739444,-|ontology_enrichment_celltype=CL:0000117!3.70e-08!23;CL:0000337!3.70e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.09e-10,23;CL:0000337,5.09e-10,23;CL:0000393,5.86e-07,39;CL:0000211,5.86e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.83e-11!34;UBERON:0001049!6.81e-11!52;UBERON:0005068!6.81e-11!52;UBERON:0006241!6.81e-11!52;UBERON:0007135!6.81e-11!52;UBERON:0000073!3.45e-09!75;UBERON:0001016!3.45e-09!75;UBERON:0002791!5.59e-09!29;UBERON:0003528!5.59e-09!29;UBERON:0001893!5.59e-09!29;UBERON:0002346!6.76e-09!71;UBERON:0003075!6.76e-09!71;UBERON:0007284!6.76e-09!71;UBERON:0001017!1.73e-08!73;UBERON:0005743!1.73e-08!73;UBERON:0002616!4.52e-08!49;UBERON:0000955!7.93e-08!50;UBERON:0006238!7.93e-08!50;UBERON:0003056!1.12e-07!49;UBERON:0003080!1.22e-07!40;UBERON:0004121!2.29e-07!102;UBERON:0000924!2.29e-07!102;UBERON:0006601!2.29e-07!102;UBERON:0000033!2.65e-07!63;UBERON:0002780!3.87e-07!39;UBERON:0001890!3.87e-07!39;UBERON:0006240!3.87e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.02e-14,34;UBERON:0001049,1.61e-13,52;UBERON:0005068,1.61e-13,52;UBERON:0006241,1.61e-13,52;UBERON:0007135,1.61e-13,52;UBERON:0000073,3.60e-13,54;UBERON:0002346,1.21e-11,64;UBERON:0003075,1.21e-11,64;UBERON:0007284,1.21e-11,64;UBERON:0001016,1.28e-11,75;UBERON:0003528,9.04e-11,29;UBERON:0002791,9.04e-11,29;UBERON:0001893,9.04e-11,29;UBERON:0001017,1.04e-10,73;UBERON:0002616,5.04e-10,46;UBERON:0004121,6.73e-10,95;UBERON:0000924,6.73e-10,95;UBERON:0006601,6.73e-10,95;UBERON:0010371,1.06e-09,73;UBERON:0000955,1.49e-09,47;UBERON:0006238,1.49e-09,47;UBERON:0010314,2.69e-09,92;UBERON:0003080,4.94e-09,40;UBERON:0003056,1.15e-08,49;UBERON:0002780,2.11e-08,39;UBERON:0001890,2.11e-08,39;UBERON:0006240,2.11e-08,39;UBERON:0000956,7.91e-07,21;UBERON:0001869,7.91e-07,21;UBERON:0000203,7.91e-07,21|phase1_expression=0.960893082628764,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0.700837921786577,0.387369970324729,0.140788722151667,0.468129052643987,0.34243593645101,0.717949430958028,0.684802919724823,0.262261207256992,0,0.202475267389826,0,0.630924330716475,0.411343300817216,1.27316895539409,1.36069264241712,0.198581902401771,0.783599367416806,0.159992422793407,0.91763712426868,1.14846392823004,0,0,0.190023419456374,0,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,3.1253413780952,0.523523743973798,0.588231488031014,2.04913645487534,1.45653105909346,1.51076181570693,1.92616169317078,2.0190142737785,0,1.30815093828268,1.5378032791413,0.777719596297134,1.39986421625363,0,0.503347818173209,0,0.336093799142464,0.257259436035947,1.43266719969378,0.515672092277442,2.22548106945558,1.5869729378161,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,0.945041568321835,1.47227472945967,1.99955689082663,1.76694832761291,1.5923803897944,1.34183659425531,4.5960939330501,0,1.91531007127782,1.22885226604995,1.58263545276233,1.55528994124096,2.08365348222704,1.67509799400829,1.12552522006336,1.68078072554491,2.06240009831567,1.70846016958924,2.05039390407831,1.4387976733305,2.04043212288321,0.289864488701678,0.860423876981386,0.679971333707751,0,0,1.79210754838934,0.702222100658759,1.53387290320252,2.85764605063156,1.7666978725517,0.563373679106722,2.56652954828636,0,0,1.29894624606728,1.01343946190039,0.505524445014783,0.91347103775248,0.776813650941515,1.33597925158342,0.867426633830679,0.304465478312141,0.691846491768175,0.904335843315735,0.117588707135705,1.25666591329675,0.741584903203122,1.01219549843938,0,0.647067399789637,1.32504911076236,2.42437626567611,0,1.75668478206928,0.628340120440365,0,0.359445373517761,1.19980546198682,0.889491589511453,2.39665023047716,1.83000241127451,2.38743269014442,1.91206752211504,1.79000820131231,1.66230435647648,1.62241263067758,1.01839363850316,0.870848794270651,0.758168275301024,1.05220927943237,0.650602214813519,0.689706313300419,1.44049703844279,0.60281927134286,1.83698547708585,0.512454881139399,1.49922759295566,1.03481348295606,0.646703978798527,0.189106080167819,0.703804496655795,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,1.59227413454795,2.1066395619397,1.28673953557358,1.13665399758237,0.414251545071004,0,0.900310307305074,1.18372367792605,1.18058539048442,0.925602677324269,1.39520366850245,0.268273401399619,1.28441876603886,0.987359099480883,0.492502392237286,1.4592385718254,1.31579988682799,1.3173006917463,1.61047702512446,2.3131894342054,1.9551876352064,0,0,0.426576501070468,1.39342003116263,0.77320476793256,0.201683524623343,0.889512175379481,0.760902504450237,0,0.823494773620054,1.25667604400135,0.795825888164603,1.36474860983384,0,0,0,0.569003702859245,1.02823661348756,0,0.8146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|EntrezGene=100039252,66521
|HGNC=
|UniProt=Q9CQK7
|association_with_transcript=-4bp_to_ENSMUST00000019917_5end
|description=CAGE_peak_4_at_Gm12693_5end,CAGE_peak_4_at_Rwdd1_5end
|id=chr10:33739434..33739444,-
|ontology_enrichment_celltype=CL:0000117!3.70e-08!23;CL:0000337!3.70e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.09e-10,23;CL:0000337,5.09e-10,23;CL:0000393,5.86e-07,39;CL:0000211,5.86e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.83e-11!34;UBERON:0001049!6.81e-11!52;UBERON:0005068!6.81e-11!52;UBERON:0006241!6.81e-11!52;UBERON:0007135!6.81e-11!52;UBERON:0000073!3.45e-09!75;UBERON:0001016!3.45e-09!75;UBERON:0002791!5.59e-09!29;UBERON:0003528!5.59e-09!29;UBERON:0001893!5.59e-09!29;UBERON:0002346!6.76e-09!71;UBERON:0003075!6.76e-09!71;UBERON:0007284!6.76e-09!71;UBERON:0001017!1.73e-08!73;UBERON:0005743!1.73e-08!73;UBERON:0002616!4.52e-08!49;UBERON:0000955!7.93e-08!50;UBERON:0006238!7.93e-08!50;UBERON:0003056!1.12e-07!49;UBERON:0003080!1.22e-07!40;UBERON:0004121!2.29e-07!102;UBERON:0000924!2.29e-07!102;UBERON:0006601!2.29e-07!102;UBERON:0000033!2.65e-07!63;UBERON:0002780!3.87e-07!39;UBERON:0001890!3.87e-07!39;UBERON:0006240!3.87e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.02e-14,34;UBERON:0001049,1.61e-13,52;UBERON:0005068,1.61e-13,52;UBERON:0006241,1.61e-13,52;UBERON:0007135,1.61e-13,52;UBERON:0000073,3.60e-13,54;UBERON:0002346,1.21e-11,64;UBERON:0003075,1.21e-11,64;UBERON:0007284,1.21e-11,64;UBERON:0001016,1.28e-11,75;UBERON:0003528,9.04e-11,29;UBERON:0002791,9.04e-11,29;UBERON:0001893,9.04e-11,29;UBERON:0001017,1.04e-10,73;UBERON:0002616,5.04e-10,46;UBERON:0004121,6.73e-10,95;UBERON:0000924,6.73e-10,95;UBERON:0006601,6.73e-10,95;UBERON:0010371,1.06e-09,73;UBERON:0000955,1.49e-09,47;UBERON:0006238,1.49e-09,47;UBERON:0010314,2.69e-09,92;UBERON:0003080,4.94e-09,40;UBERON:0003056,1.15e-08,49;UBERON:0002780,2.11e-08,39;UBERON:0001890,2.11e-08,39;UBERON:0006240,2.11e-08,39;UBERON:0000956,7.91e-07,21;UBERON:0001869,7.91e-07,21;UBERON:0000203,7.91e-07,21
|phase1_expression=0.960893082628764,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0.700837921786577,0.387369970324729,0.140788722151667,0.468129052643987,0.34243593645101,0.717949430958028,0.684802919724823,0.262261207256992,0,0.202475267389826,0,0.630924330716475,0.411343300817216,1.27316895539409,1.36069264241712,0.198581902401771,0.783599367416806,0.159992422793407,0.91763712426868,1.14846392823004,0,0,0.190023419456374,0,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,3.1253413780952,0.523523743973798,0.588231488031014,2.04913645487534,1.45653105909346,1.51076181570693,1.92616169317078,2.0190142737785,0,1.30815093828268,1.5378032791413,0.777719596297134,1.39986421625363,0,0.503347818173209,0,0.336093799142464,0.257259436035947,1.43266719969378,0.515672092277442,2.22548106945558,1.5869729378161,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,0.945041568321835,1.47227472945967,1.99955689082663,1.76694832761291,1.5923803897944,1.34183659425531,4.5960939330501,0,1.91531007127782,1.22885226604995,1.58263545276233,1.55528994124096,2.08365348222704,1.67509799400829,1.12552522006336,1.68078072554491,2.06240009831567,1.70846016958924,2.05039390407831,1.4387976733305,2.04043212288321,0.289864488701678,0.860423876981386,0.679971333707751,0,0,1.79210754838934,0.702222100658759,1.53387290320252,2.85764605063156,1.7666978725517,0.563373679106722,2.56652954828636,0,0,1.29894624606728,1.01343946190039,0.505524445014783,0.91347103775248,0.776813650941515,1.33597925158342,0.867426633830679,0.304465478312141,0.691846491768175,0.904335843315735,0.117588707135705,1.25666591329675,0.741584903203122,1.01219549843938,0,0.647067399789637,1.32504911076236,2.42437626567611,0,1.75668478206928,0.628340120440365,0,0.359445373517761,1.19980546198682,0.889491589511453,2.39665023047716,1.83000241127451,2.38743269014442,1.91206752211504,1.79000820131231,1.66230435647648,1.62241263067758,1.01839363850316,0.870848794270651,0.758168275301024,1.05220927943237,0.650602214813519,0.689706313300419,1.44049703844279,0.60281927134286,1.83698547708585,0.512454881139399,1.49922759295566,1.03481348295606,0.646703978798527,0.189106080167819,0.703804496655795,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,1.59227413454795,2.1066395619397,1.28673953557358,1.13665399758237,0.414251545071004,0,0.900310307305074,1.18372367792605,1.18058539048442,0.925602677324269,1.39520366850245,0.268273401399619,1.28441876603886,0.987359099480883,0.492502392237286,1.4592385718254,1.31579988682799,1.3173006917463,1.61047702512446,2.3131894342054,1.9551876352064,0,0,0.426576501070468,1.39342003116263,0.77320476793256,0.201683524623343,0.889512175379481,0.760902504450237,0,0.823494773620054,1.25667604400135,0.795825888164603,1.36474860983384,0,0,0,0.569003702859245,1.02823661348756,0,0.814605311381257,0.581857461502877,0.561086559122548,1.07502113111237,0.295220295959204,0.470996183524124,0.740382983530803,0.296452627087149,0.667380422864376,0.786235980452812,0.674586337154561,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,1.24815069245824,0.505157755894224,1.07638448113147,0.482443521363367,0.554259570499814,0.947457058852424,0.977789858652155,1.01847051465113,0.234690248288502,0.837531287209079,0.476087281772027,0.585400943573396,1.10344600874334,0,0.637819074629948,0.655453258862952,0.690739927463582,0.723245292907558,1.50791283939272,0.54390568381871,0,0.275936746304732,3.53211297973142,1.87538698547525,0.819674726883377,1.26235463602186,0.315508219416257,0.780877488593277,0.215423397732799,0.716906393857656,0.445597348164788,0.283076530788832,0.809621403349789,1.16902343164525,1.58115111178609,0.642642632843614,0.99358059645788,1.06839362200353,0.977321756121456,0.659880491890142,1.32745138339963,0.485561272309963,0.906970670894253,0.943025398779491,0.590603785761546,0.614870295887855,1.03371317267288,0,1.42598951353889,0.632073515871632,0,1.03135543248187,1.02131881726136,0.720244376125241,0.517434735131018,0,1.06404140185364,0.535106452806212,0.822745103010605,0.304464949114599,2.11204537257339,1.90648863777438,0.220528398054962,1.81374878235628,0.484393280087717,1.32688434841943,0.596861720015682,0.492422699235184,0.874442509889552,2.03967832211561,0.170870880797853,1.23832120777933,0.370389054739423,0.376736914009382,0.136694227721025,0.228778173206523,0.849892149969277,0.559805809294632,0.829199842826543,1.90934123603023,1.58167996790568,1.42323626988794,0.432021363287205,0.836353184057875,0.218362563746178,1.07891477107857,0.330613822901344,0,0.388844919875379,0,6.20062232552609,1.19613236835183,0.496375471371293,0.777804753376191,0.258319646955462,0.844780627453891,0.938857909166032,0.5208175393758,0.629156066554265,0.724752362478018,2.88030006257865,0.948033361884535,0.608175645870493,0.821687657318618,0.909445760844565,0.716106782669926,1.19208812868759,0.961563596159751,0.738447635872886,1.00966449948148,0.609654453239999,0.705783295957884,0.38983152295901,0.481059208201647,0.818138315270983,1.13365191807606,0.665957860122194,1.97370484540847,2.18250001273302,0.965947970160952,1.12609485270709,0.183151624267265,0,0.501572104035363,2.82375921308533,0.460325236507177,1.14579102687879,1.71853182343688,1.37016503954128,0,1.35004500046361,1.80128481289688,2.26571204492102,1.55328093525546,1.764384908931,1.59609949360412,1.19513524027894,1.45864030240976,0.838452650511929,1.2869045591501,1.11123363900808,2.06035057238894,0.962757628775446,1.01078884705519,0.25347929989024,1.69763707247469,1.12369808963859,0.576226371643824,1.26358031702349,0.476293691283074,1.39061191133827,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.532427418478012,0.476872379894642,1.30811774969096,0.658765662907314,1.4384483341585,0.73171189149109,0.789209134313529,1.08643291076689,1.12228454331548,1.42362021749009,1.18205378850676,1.22769312950907,1.54936841185966,1.15743966588685,0.499621155875892,0.233931608445408,0.429742108096597,0.956441660344217,0.220591419119515,2.08681052058379
|short_description=p4@Gm12693,p4@Rwdd1
}}

Revision as of 16:37, 12 September 2013

Short description:p4@Gm12693, p4@Rwdd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gm12693_5end, CAGE_peak_4_at_Rwdd1_5end
Coexpression cluster:NA
Association with transcript: -4bp_to_ENSMUST00000019917_5end
EntrezGene:100039252,66521
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Gm12693p4@Rwdd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.09e-1023
neuroblast (sensu Vertebrata)5.09e-1023
electrically responsive cell5.86e-0739
electrically active cell5.86e-0739

Uber anatomy
Ontology termp-valuen
gray matter6.02e-1434
neural tube1.61e-1352
neural rod1.61e-1352
future spinal cord1.61e-1352
neural keel1.61e-1352
regional part of nervous system3.60e-1354
neurectoderm1.21e-1164
neural plate1.21e-1164
presumptive neural plate1.21e-1164
nervous system1.28e-1175
brain grey matter9.04e-1129
regional part of telencephalon9.04e-1129
telencephalon9.04e-1129
central nervous system1.04e-1073
regional part of brain5.04e-1046
ectoderm-derived structure6.73e-1095
ectoderm6.73e-1095
presumptive ectoderm6.73e-1095
ecto-epithelium1.06e-0973
brain1.49e-0947
future brain1.49e-0947
structure with developmental contribution from neural crest2.69e-0992
anterior neural tube4.94e-0940
pre-chordal neural plate1.15e-0849
regional part of forebrain2.11e-0839
forebrain2.11e-0839
future forebrain2.11e-0839
cerebral cortex7.91e-0721
cerebral hemisphere7.91e-0721
pallium7.91e-0721







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