FFCP PHASE1:Hg19::chr2:211090162..211090179,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=33|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=88|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000498120_5end|coexpression_cluster_id=C1499|description=CAGE_peak_2_at_ACADL_5end|id=chr2:211090162..211090179,-|ontology_enrichment_celltype=CL:0000136!2.09e-09!15|ontology_enrichment_celltype_v019=CL:0000136;4.13e-22;13!CL:0002615;2.13e-08;3!CL:0002580;6.25e-08;3|ontology_enrichment_celltype_v019_2=CL:0000136,1.08e-18,15;CL:0002615,2.95e-08,3;CL:0002580,4.44e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.33e-56!115;UBERON:0001049!5.98e-30!57;UBERON:0005068!5.98e-30!57;UBERON:0006241!5.98e-30!57;UBERON:0007135!5.98e-30!57;UBERON:0001017!1.48e-26!82;UBERON:0000073!9.07e-26!94;UBERON:0001016!9.07e-26!94;UBERON:0005743!1.01e-25!86;UBERON:0003075!1.57e-24!86;UBERON:0007284!1.57e-24!86;UBERON:0002616!6.63e-24!59;UBERON:0003080!4.36e-23!42;UBERON:0002346!1.26e-22!90;UBERON:0002780!4.48e-22!41;UBERON:0001890!4.48e-22!41;UBERON:0006240!4.48e-22!41;UBERON:0000955!2.73e-21!69;UBERON:0006238!2.73e-21!69;UBERON:0002020!5.11e-20!34;UBERON:0003528!5.11e-20!34;UBERON:0001893!7.15e-20!34;UBERON:0002791!3.26e-19!33;UBERON:0001869!9.49e-19!32;UBERON:0000956!4.32e-17!25;UBERON:0000203!4.32e-17!25;UBERON:0003056!2.91e-15!61;UBERON:0002619!3.05e-15!22;UBERON:0004121!1.10e-14!169;UBERON:0000153!4.15e-14!129;UBERON:0007811!4.15e-14!129;UBERON:0000924!7.21e-14!173;UBERON:0006601!7.21e-14!173;UBERON:0001950!9.91e-14!20;UBERON:0000033!1.32e-12!123;UBERON:0000025!1.77e-09!194;UBERON:0000475!2.29e-09!365;UBERON:0004111!7.84e-09!241;UBERON:0003076!5.36e-08!15;UBERON:0003057!5.36e-08!15;UBERON:0002298!5.68e-08!8;UBERON:0000468!1.41e-07!659;UBERON:0000922!1.54e-07!612;UBERON:0000481!1.71e-07!347;UBERON:0000477!5.04e-07!286;UBERON:0000923!8.58e-07!604;UBERON:0005291!8.58e-07!604;UBERON:0006598!8.58e-07!604;UBERON:0002532!8.58e-07!604|ontology_enrichment_uberon_v019=UBERON:0003688;6.63e-10;6!UBERON:0002358;6.63e-10;6!UBERON:0003684;6.63e-10;6!UBERON:0001178;6.63e-10;6!UBERON:0007023;9.91e-10;114!UBERON:0004457;6.49e-09;9!UBERON:0000042;6.49e-09;9!UBERON:0000310;3.24e-08;10!UBERON:0003978;3.47e-08;3!UBERON:0000946;3.47e-08;3!UBERON:0006947;8.40e-08;3!UBERON:0004054;8.40e-08;3!UBERON:0001443;2.14e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.02e-33,114;UBERON:0003688,8.08e-10,6;UBERON:0002358,8.08e-10,6;UBERON:0003684,8.08e-10,6;UBERON:0001178,8.08e-10,6;UBERON:0000310,2.32e-08,10;UBERON:0003978,3.25e-08,3;UBERON:0009751,3.25e-08,3;UBERON:0000946,3.25e-08,3;UBERON:0002523,3.25e-08,3;UBERON:0005983,3.25e-08,3;UBERON:0002165,3.25e-08,3;UBERON:0002062,3.25e-08,3;UBERON:0007280,3.25e-08,3;UBERON:0006947,6.99e-08,3;UBERON:0004054,6.99e-08,3;UBERON:0001443,1.58e-07,11;UBERON:0009569,5.19e-07,112|phase1_expression=2.54349730978779,2.78330681058278,4.08767771878316,2.00146596706261,4.46961094427288,4.36169262050184,2.53299878168311,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,3.9313088667105,2.95394953340702,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,1.98486246255021,5.37116906508219,2.24528075546459,1.40953064181271,0,1.60853921143608,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84292754744295,0.183138929636687,0.495056999523528,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,1.26602474769461,0,0,0,8.36841550654493,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,1.93866549219044,0.834912883456661,0,0,0,2.89999830173917,0,0,0,0,0.583209226766509,0,0,0.964771509003264,0,0.552896299656123,0.29554761895354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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=33 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=88 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000498120_5end | |||
|coexpression_cluster_id=C1499 | |||
|description=CAGE_peak_2_at_ACADL_5end | |||
|id=chr2:211090162..211090179,- | |||
|ontology_enrichment_celltype=CL:0000136!2.09e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.13e-22;13!CL:0002615;2.13e-08;3!CL:0002580;6.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.08e-18,15;CL:0002615,2.95e-08,3;CL:0002580,4.44e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-56!115;UBERON:0001049!5.98e-30!57;UBERON:0005068!5.98e-30!57;UBERON:0006241!5.98e-30!57;UBERON:0007135!5.98e-30!57;UBERON:0001017!1.48e-26!82;UBERON:0000073!9.07e-26!94;UBERON:0001016!9.07e-26!94;UBERON:0005743!1.01e-25!86;UBERON:0003075!1.57e-24!86;UBERON:0007284!1.57e-24!86;UBERON:0002616!6.63e-24!59;UBERON:0003080!4.36e-23!42;UBERON:0002346!1.26e-22!90;UBERON:0002780!4.48e-22!41;UBERON:0001890!4.48e-22!41;UBERON:0006240!4.48e-22!41;UBERON:0000955!2.73e-21!69;UBERON:0006238!2.73e-21!69;UBERON:0002020!5.11e-20!34;UBERON:0003528!5.11e-20!34;UBERON:0001893!7.15e-20!34;UBERON:0002791!3.26e-19!33;UBERON:0001869!9.49e-19!32;UBERON:0000956!4.32e-17!25;UBERON:0000203!4.32e-17!25;UBERON:0003056!2.91e-15!61;UBERON:0002619!3.05e-15!22;UBERON:0004121!1.10e-14!169;UBERON:0000153!4.15e-14!129;UBERON:0007811!4.15e-14!129;UBERON:0000924!7.21e-14!173;UBERON:0006601!7.21e-14!173;UBERON:0001950!9.91e-14!20;UBERON:0000033!1.32e-12!123;UBERON:0000025!1.77e-09!194;UBERON:0000475!2.29e-09!365;UBERON:0004111!7.84e-09!241;UBERON:0003076!5.36e-08!15;UBERON:0003057!5.36e-08!15;UBERON:0002298!5.68e-08!8;UBERON:0000468!1.41e-07!659;UBERON:0000922!1.54e-07!612;UBERON:0000481!1.71e-07!347;UBERON:0000477!5.04e-07!286;UBERON:0000923!8.58e-07!604;UBERON:0005291!8.58e-07!604;UBERON:0006598!8.58e-07!604;UBERON:0002532!8.58e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.63e-10;6!UBERON:0002358;6.63e-10;6!UBERON:0003684;6.63e-10;6!UBERON:0001178;6.63e-10;6!UBERON:0007023;9.91e-10;114!UBERON:0004457;6.49e-09;9!UBERON:0000042;6.49e-09;9!UBERON:0000310;3.24e-08;10!UBERON:0003978;3.47e-08;3!UBERON:0000946;3.47e-08;3!UBERON:0006947;8.40e-08;3!UBERON:0004054;8.40e-08;3!UBERON:0001443;2.14e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.02e-33,114;UBERON:0003688,8.08e-10,6;UBERON:0002358,8.08e-10,6;UBERON:0003684,8.08e-10,6;UBERON:0001178,8.08e-10,6;UBERON:0000310,2.32e-08,10;UBERON:0003978,3.25e-08,3;UBERON:0009751,3.25e-08,3;UBERON:0000946,3.25e-08,3;UBERON:0002523,3.25e-08,3;UBERON:0005983,3.25e-08,3;UBERON:0002165,3.25e-08,3;UBERON:0002062,3.25e-08,3;UBERON:0007280,3.25e-08,3;UBERON:0006947,6.99e-08,3;UBERON:0004054,6.99e-08,3;UBERON:0001443,1.58e-07,11;UBERON:0009569,5.19e-07,112 | |||
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|short_description=p2@ACADL | |||
}} |
Revision as of 16:22, 12 September 2013
Short description: | p2@ACADL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ACADL_5end |
Coexpression cluster: | C1499_mature_Hepatocyte_lung_aorta_heart_pancreas_thyroid |
Association with transcript: | 0bp_to_ENST00000498120_5end |
EntrezGene: | ACADL |
HGNC: | 88 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.08e-18 | 15 |
adipocyte of omentum tissue | 2.95e-08 | 3 |
preadipocyte of the breast | 4.44e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.02e-33 | 114 |
omentum | 8.08e-10 | 6 |
peritoneum | 8.08e-10 | 6 |
abdominal cavity | 8.08e-10 | 6 |
visceral peritoneum | 8.08e-10 | 6 |
breast | 2.32e-08 | 10 |
valve | 3.25e-08 | 3 |
cardiac mesenchyme | 3.25e-08 | 3 |
cardial valve | 3.25e-08 | 3 |
tunica intima | 3.25e-08 | 3 |
heart layer | 3.25e-08 | 3 |
endocardium | 3.25e-08 | 3 |
endocardial cushion | 3.25e-08 | 3 |
presumptive endocardium | 3.25e-08 | 3 |
male genital duct | 6.99e-08 | 3 |
internal male genitalia | 6.99e-08 | 3 |
chest | 1.58e-07 | 11 |
subdivision of trunk | 5.19e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.